SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000111671
Gene: SPSB2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr12:6870935-6889358 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_001200244 chr12:6866190-6875304 Sample_01_0012 Lung A549_dexamethasone_1h 244 1 268 32 2 97 1520 TPI1,SPSB2,USP5,RPL13P5,GPR162,LEPREL2,DSTNP2,ENO2,ATN1,LRRC23,CDCA3,GNB3
SE_02_021200133 chr12:6866680-6876536 Sample_02_0212 Burkitts lymphoma of the left maxilla Raji_DMSO 133 1 294 32 2 92 1404 SPSB2,TPI1,RPL13P5,GPR162,LEPREL2,USP5,DSTNP2,ENO2,ATN1,LRRC23,CDCA3,GNB3
SE_02_081900811 chr12:6866839-6874643 Sample_02_0819 Ovary Mucinous ovarian cancer 811 1 236 27 2 92 1383 SPSB2,TPI1,USP5,CDCA3,GPR162,GNB3,ENO2,P3H3,DSTNP2,LRRC23,ATN1,RPL13P5
SE_02_076500578 chr12:6866849-6875002 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 578 1 242 28 2 92 1383 SPSB2,TPI1,USP5,CDCA3,GPR162,GNB3,ENO2,P3H3,DSTNP2,LRRC23,ATN1,RPL13P5
SE_02_044600691 chr12:6871003-6874287 Sample_02_0446 Bone osteosarcoma tumor P2 691 1 89 10 1 51 593 SPSB2,USP5,TPI1,CDCA3,GPR162,GNB3,ENO2,P3H3,DSTNP2,LRRC23,RPL13P5
Genomic distribution of SEs associated with SPSB2
Genome Browser

The strength of the tissue affected by the gene

Expression of SPSB2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)