SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000121067
Gene: SPOP Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:49598884-49678163 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_01_008600029 chr17:49565249-49697386 Sample_01_0086 Thoracic aorta thoracic-aorta 29 14 3039 102 2 675 2371 SPOP,NXPH3,SLC35B1
SE_01_007800108 chr17:49592111-49694802 Sample_01_0078 Heart left ventricle heart-left-ventricle 108 13 2300 74 2 469 959 SPOP,NXPH3,SLC35B1
SE_02_090800359 chr17:49596345-49704030 Sample_02_0908 Heart left ventricle_DCM_LV1262 359 34 2415 81 2 517 1162 SLC35B1,SPOP,LOC100288866,NXPH3
SE_02_091200279 chr17:49596749-49703967 Sample_02_0912 Heart left ventricle_DCM_LV1300 279 34 2404 81 2 513 1151 SLC35B1,SPOP,LOC100288866,NXPH3
SE_02_122400250 chr17:49596989-49688387 Sample_02_1224 Bone marrow normal plasma cell 250 51 2026 71 2 425 959 SPOP,LOC100288866,NXPH3,SLC35B1
SE_01_009400278 chr17:49597797-49703840 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 278 26 2375 81 2 476 1136 SLC35B1,SPOP,LOC100288866,NXPH3
SE_01_007600743 chr17:49602233-49692291 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 743 10 2005 69 1 371 695 SPOP,NXPH3,SLC35B1
SE_02_088901027 chr17:49602583-49656504 Sample_02_0889 Heart left ventricle_LV1183 1027 18 1158 42 0 221 448 SPOP,LOC100288866,NXPH3
SE_01_008100748 chr17:49603125-49657065 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 748 6 1156 42 0 219 448 SPOP,NXPH3
SE_00_000400156 chr17:49610649-49646749 Sample_00_0004 Aorta aorta 156 17 776 27 0 169 374 SPOP,NXPH3
SE_01_010900145 chr17:49610749-49694130 Sample_01_0109 Colon transverse colon_54y 145 39 1853 61 1 335 628 SPOP,LOC100288866,NXPH3,SLC35B1
SE_02_040900111 chr17:49615485-49653666 Sample_02_0409 Kidney G401_NoDox 111 7 836 32 0 126 333 SPOP,NXPH3
SE_02_091900843 chr17:49615867-49656926 Sample_02_0919 Heart left ventricle_DCM_LV1532 843 17 876 33 0 129 333 SPOP,LOC100288866,NXPH3
SE_02_091800949 chr17:49616295-49647259 Sample_02_0918 Heart left ventricle_DCM_LV1437 949 12 681 27 0 110 333 SPOP,LOC100288866,NXPH3
SE_02_091000963 chr17:49616409-49656653 Sample_02_0910 Heart left ventricle_DCM_LV1275 963 20 862 32 0 124 333 SPOP,LOC100288866,NXPH3
SE_02_088701163 chr17:49616448-49647241 Sample_02_0887 Heart left ventricle_LV1121 1163 14 676 26 0 110 333 SPOP,LOC100288866,NXPH3
SE_02_089400693 chr17:49616614-49647357 Sample_02_0894 Heart left ventricle_LV1248 693 14 679 26 0 101 333 SPOP,LOC100288866,NXPH3
SE_02_091700987 chr17:49616686-49652905 Sample_02_0917 Heart left ventricle_DCM_LV1433 987 16 785 31 0 99 333 SPOP,LOC100288866,NXPH3
SE_02_092000986 chr17:49616809-49647231 Sample_02_0920 Heart left ventricle_DCM_LV1535 986 11 672 26 0 87 333 SPOP,LOC100288866,NXPH3
SE_02_142900727 chr17:49618403-49676234 Sample_02_1429 Blood GM12878_WT 727 16 1288 47 0 146 431 SPOP,LOC100288866,NXPH3,SLC35B1
SE_02_103602753 chr17:49625273-49676045 Sample_02_1036 Mammary gland HCC70_XY018 2753 17 1124 38 0 101 235 SPOP,NXPH3,SLC35B1
SE_01_009300582 chr17:49626051-49649848 Sample_01_0093 Aorta ascending aorta 582 1 528 16 0 42 148 SPOP
SE_02_040800132 chr17:49627018-49654399 Sample_02_0408 Kidney G401_Dox 132 3 591 19 0 48 148 SPOP
SE_02_135200768 chr17:49629747-49648601 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 768 4 399 13 0 36 122 SPOP
SE_02_126600847 chr17:49631604-49648379 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 847 5 365 13 0 27 122 SPOP
SE_02_126501098 chr17:49631720-49648738 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 1098 4 368 13 0 31 122 SPOP
SE_02_151300491 chr17:49631855-49648866 Sample_02_1513 Lung Transitional AT2->1 cells 491 6 366 13 0 31 122 SPOP
SE_01_010200379 chr17:49632045-49647813 Sample_01_0102 Artery tibial artery 379 12 343 12 0 26 122 SPOP
SE_02_132801292 chr17:49634296-49648224 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 1292 6 315 13 0 18 122 SPOP
SE_02_151400622 chr17:49635333-49649043 Sample_02_1514 Lung Differentiated AT1-like cells 622 5 315 12 0 21 122 SPOP
SE_02_151200467 chr17:49641426-49648526 Sample_02_1512 Lung Purified AT2 cells 467 4 173 7 0 15 101 SPOP
SE_02_153300493 chr17:49641426-49648536 Sample_02_1533 Lung purified primary alveolar epithelial type 2 cells 493 3 173 7 0 15 101 SPOP
SE_01_010401031 chr17:49662950-49691987 Sample_01_0104 Lung upper lobe of left lung 1031 7 679 21 1 133 247 SPOP,SLC35B1
SE_02_130900807 chr17:49664547-49691708 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 807 5 637 21 1 130 247 SPOP,SLC35B1
SE_02_103400603 chr17:49667639-49697100 Sample_02_1034 Blood AML cell 603 6 673 18 1 143 247 SPOP,SLC35B1
SE_02_147101104 chr17:49669170-49692546 Sample_02_1471 Blood Outgrowth Endothelia BOEC 1104 3 531 14 1 129 208 SPOP,SLC35B1
SE_01_007000684 chr17:49669652-49697106 Sample_01_0070 Ascending aorta ascending-aorta 684 5 626 17 1 143 208 SPOP,SLC35B1
SE_02_148000973 chr17:49669861-49691544 Sample_02_1480 Bone MHH-ES-1 973 10 499 14 1 123 208 SPOP,SLC35B1
SE_02_147900351 chr17:49670185-49702276 Sample_02_1479 Bone EW-7 351 15 749 22 1 165 279 SLC35B1,SPOP
SE_02_074600405 chr17:49670595-49693095 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 405 6 520 13 1 109 208 SPOP,SLC35B1
SE_02_146000579 chr17:49670688-49696669 Sample_02_1460 Blood Mutz-3 579 7 604 16 1 122 208 SPOP,SLC35B1
SE_02_143100495 chr17:49673663-49678668 Sample_02_1431 Blood T cell 495 1 124 6 0 39 208 SPOP,SLC35B1
SE_02_048400636 chr17:49673730-49676438 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 636 2 69 3 0 5 59 SPOP,SLC35B1
SE_02_061700577 chr17:49674214-49696970 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 577 3 523 16 1 115 208 SPOP,SLC35B1
SE_02_002600443 chr17:49674348-49696558 Sample_02_0026 Blood CD4donorE 443 6 516 16 1 114 208 SPOP,SLC35B1
SE_02_002500457 chr17:49674355-49678128 Sample_02_0025 Blood CD19donorA 457 2 92 4 0 27 141 SPOP,SLC35B1
SE_02_002200580 chr17:49674918-49696959 Sample_02_0022 Blood CD8donorA 580 9 512 16 1 115 208 SPOP,SLC35B1
SE_02_048700274 chr17:49675111-49678095 Sample_02_0487 Bone marrow HSCe_71y_CD34+,CD38-,Lineage- 274 2 83 4 0 25 137 SPOP,SLC35B1
SE_02_048800354 chr17:49675421-49676407 Sample_02_0488 Bone marrow HSCe_74y_CD34+,CD38-,Lineage- 354 1 32 2 0 3 59 SPOP,SLC35B1
SE_02_048600080 chr17:49675447-49678108 Sample_02_0486 Bone marrow HSCe_66y_CD34+,CD38-,Lineage- 80 1 72 3 0 25 140 SPOP,SLC35B1
SE_02_048900282 chr17:49675468-49678201 Sample_02_0489 Bone marrow HSCe_23y_F_CD34+,CD38-,Lineage- 282 1 75 2 0 31 161 SPOP,SLC35B1
SE_02_048200240 chr17:49675529-49678144 Sample_02_0482 Bone marrow HSCe_18y_CD34+,CD38-,Lineage-_ 240 1 72 2 0 25 142 SPOP,SLC35B1
SE_02_143000182 chr17:49675552-49696964 Sample_02_1430 Blood Kasumi-3_mock-infected 182 3 498 14 1 113 208 SPOP,SLC35B1
SE_02_002300449 chr17:49675617-49696878 Sample_02_0023 Blood CD8donorC 449 7 495 14 1 113 208 SPOP,SLC35B1
SE_02_109400315 chr17:49675644-49678215 Sample_02_1094 Embryo H9_0Dox 315 1 70 2 0 31 169 SPOP,SLC35B1
SE_02_104200704 chr17:49675736-49699469 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 704 6 546 16 1 120 204 SPOP,SLC35B1
SE_01_002300458 chr17:49688043-49693349 Sample_01_0023 Embryo cardiac-muscle-cell 458 1 119 1 0 22 0 SPOP,SLC35B1
SE_02_074500807 chr17:49688423-49692554 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 807 2 90 1 0 21 0 SPOP,SLC35B1
Genomic distribution of SEs associated with SPOP
Genome Browser

The strength of the tissue affected by the gene

Expression of SPOP

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)