Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000184347 |
| Gene: | SLIT3 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr5:168661733-169301139 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_003900528 | chr5:169026999-169064986 |
Sample_02_0039 | Embryo | AFG | 528 | 6 | 1117 | 9 | 9 | 190 | 0 | SLIT3,MIR585 |
| SE_02_018300444 | chr5:169049219-169068095 |
Sample_02_0183 | Skin | SKMEL2 | 444 | 5 | 559 | 8 | 7 | 109 | 0 | SLIT3,MIR585 |
| SE_02_033000538 | chr5:169079800-169088856 |
Sample_02_0330 | Endoderm | MHG | 538 | 3 | 277 | 15 | 3 | 28 | 0 | SLIT3,MIR585 |
| SE_02_111100685 | chr5:169125205-169174061 |
Sample_02_1111 | Other | HGrC1_SMAD2/3KO | 685 | 9 | 1562 | 14 | 6 | 253 | 0 | SLIT3,MIR585 |
| SE_02_007600444 | chr5:169142404-169177981 |
Sample_02_0076 | Autonomic ganglia | SH-SY5Y_DMSO_3h | 444 | 8 | 1121 | 12 | 5 | 165 | 0 | SLIT3,MIR585 |
| SE_02_111500721 | chr5:169159410-169176978 |
Sample_02_1115 | Liver | HepG2 | 721 | 6 | 585 | 11 | 3 | 52 | 0 | SLIT3,MIR585 |
| SE_02_113701140 | chr5:169159544-169165895 |
Sample_02_1137 | Retinal Pigmented Epithelial | RPE1-interphase | 1140 | 1 | 221 | 0 | 1 | 38 | 0 | SLIT3,MIR585 |
| SE_01_004501152 | chr5:169159796-169183710 |
Sample_01_0045 | Mammary gland | mammary-epithelial-cell | 1152 | 4 | 754 | 11 | 3 | 114 | 0 | SLIT3,MIR585 |
| SE_02_111300863 | chr5:169159901-169176368 |
Sample_02_1113 | Bone | U2OS | 863 | 6 | 529 | 11 | 3 | 50 | 0 | SLIT3,MIR585 |
| SE_02_124500221 | chr5:169269406-169303224 |
Sample_02_1245 | Brain | LAN5_Ethanol | 221 | 11 | 909 | 18 | 2 | 288 | 287 | SLIT3,MIR585 |
| SE_02_066300150 | chr5:169269978-169300701 |
Sample_02_0663 | Thyroid | TT | 150 | 7 | 830 | 17 | 2 | 240 | 96 | SLIT3,MIR585 |
| SE_02_053301091 | chr5:169271481-169308353 |
Sample_02_0533 | Blood vessel | Circle of Willis_54y | 1091 | 13 | 987 | 20 | 3 | 256 | 287 | SLIT3,MIR585 |
| SE_02_029900422 | chr5:169280313-169303556 |
Sample_02_0299 | Neuroblastoma | CLB-MA | 422 | 3 | 590 | 12 | 2 | 196 | 287 | SLIT3,MIR585 |
| SE_01_011100587 | chr5:169333448-169356631 |
Sample_01_0111 | Brain | SK-N-SH | 587 | 10 | 620 | 23 | 1 | 69 | 0 | SLIT3 |
| SE_02_077101231 | chr5:169347899-169375484 |
Sample_02_0771 | Ovary | OVCA429_shGRHL2 | 1231 | 13 | 732 | 11 | 0 | 44 | 0 | SLIT3 |
| SE_02_053400693 | chr5:169411211-169443703 |
Sample_02_0534 | Blood vessel | Circle of Willis_60y | 693 | 12 | 908 | 42 | 3 | 137 | 0 | SLIT3 |
| SE_02_053301109 | chr5:169411934-169443571 |
Sample_02_0533 | Blood vessel | Circle of Willis_54y | 1109 | 20 | 875 | 40 | 3 | 116 | 0 | SLIT3 |
| SE_02_049400873 | chr5:169420537-169424704 |
Sample_02_0494 | Islets | differentiated hESCs Late pancreatic progenitor cells | 873 | 1 | 108 | 4 | 1 | 19 | 0 | SLIT3 |
Genomic distribution of SEs associated with SLIT3