SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000174669
Gene: SLC29A2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr11:66362521-66372214 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103601433 chr11:66349913-66375718 Sample_02_1036 Mammary gland HCC70_XY018 1433 7 637 51 0 79 1710 SLC29A2,RIN1,CD248,BRMS1,B4GAT1,NPAS4
SE_02_105100739 chr11:66349934-66370742 Sample_02_1051 Esophagus Eso26 739 5 522 44 0 56 1308 SLC29A2,RIN1,CD248,BRMS1,B4GAT1
SE_02_047800835 chr11:66350166-66372759 Sample_02_0478 Colon normal colon mucosa 835 3 577 47 0 76 1710 SLC29A2,RIN1,CD248,BRMS1,B4GAT1,NPAS4,CTD-3074O7.11,KLC2,CCS,B3GNT1,BBS1,TMEM151A,MRPL11
SE_02_143201711 chr11:66361605-66372974 Sample_02_1432 Bone A673 STAG2 WT 1711 6 316 25 0 75 1710 SLC29A2,RIN1,CD248,BRMS1,B4GAT1,NPAS4
SE_02_046501326 chr11:66362750-66386618 Sample_02_0465 Adipose subcutaneous adipocytes 1326 10 597 53 0 77 1620 SLC29A2,RIN1,CD248,BRMS1,B4GAT1,NPAS4
SE_02_066300636 chr11:66362933-66394656 Sample_02_0663 Thyroid TT 636 11 802 85 0 77 1590 SLC29A2,MRPL11,RIN1,CD248,BRMS1,B4GAT1,NPAS4
SE_02_108600601 chr11:66365317-66373006 Sample_02_1086 Mammary gland T47D_shCtrl_0hr 601 3 215 11 0 57 1282 SLC29A2,RIN1,CD248,BRMS1,B4GAT1,NPAS4
SE_02_109200675 chr11:66365366-66373607 Sample_02_1092 Mammary gland T47D_shCtrl_24hr 675 3 223 11 0 60 1282 SLC29A2,RIN1,CD248,BRMS1,B4GAT1,NPAS4
SE_02_085200458 chr11:66365876-66373053 Sample_02_0852 Mammary gland MCF7L-P 458 3 201 9 0 57 1259 SLC29A2,RIN1,CD248,BRMS1,B4GAT1,NPAS4
SE_02_115900460 chr11:66365876-66373053 Sample_02_1159 Mammary gland MCF7 460 3 201 9 0 57 1259 SLC29A2,RIN1,CD248,BRMS1,B4GAT1,NPAS4
SE_02_081000345 chr11:66366027-66375635 Sample_02_0810 Mammary gland T47D noSerum 345 2 247 12 0 55 1227 SLC29A2,RIN1,CD248,BRMS1,B4GAT1,NPAS4
SE_02_028600473 chr11:66367374-66373495 Sample_02_0286 Liver HuH7_IL-1alpha_1h 473 1 166 8 0 47 1044 SLC29A2,RIN1,NPAS4,B3GNT1,BRMS1
SE_02_062500320 chr11:66369239-66373133 Sample_02_0625 Mammary gland WS8_4OHT 320 1 101 4 0 31 682 SLC29A2,RIN1,BRMS1,B4GAT1,NPAS4
SE_02_001700630 chr11:66369373-66373088 Sample_02_0017 Embryo H9_ESC 630 1 95 4 0 30 643 SLC29A2,RIN1,NPAS4,B3GNT1,BRMS1
SE_02_062700328 chr11:66369380-66373113 Sample_02_0627 Mammary gland WS8_VEH 328 1 95 4 0 30 642 SLC29A2,RIN1,BRMS1,B4GAT1,NPAS4
SE_02_148300795 chr11:66369579-66374289 Sample_02_1483 Bone RD-ES 795 1 105 5 0 26 600 SLC29A2,RIN1,BRMS1,B4GAT1,NPAS4
SE_02_102700384 chr11:66369730-66372989 Sample_02_1027 Esophagus KYSE180_1 384 1 82 4 0 23 579 SLC29A2,RIN1,BRMS1,B4GAT1,NPAS4
SE_02_094800514 chr11:66369797-66373104 Sample_02_0948 Pharyng Detroit562 514 1 81 4 0 23 563 SLC29A2,RIN1,BRMS1,B4GAT1,NPAS4
Genomic distribution of SEs associated with SLC29A2
Genome Browser

The strength of the tissue affected by the gene

Expression of SLC29A2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)