SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000133872
Gene: SARAF Gene type: protein_coding
Strand: - External links:
Genomic region: chr8:30063003-30083208 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_081901159 chr8:29722709-29741531 Sample_02_0819 Ovary Mucinous ovarian cancer 1159 4 536 11 0 35 128 LINC00589,LOC101929450,SARAF
SE_02_101701794 chr8:29846305-29886965 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1794 7 1114 32 4 61 0 FAM183CP,LOC101929470,SARAF
SE_00_004800370 chr8:30004087-30007105 Sample_00_0048 Embryo neuronal stem cell originated from H1 370 3 95 4 0 0 0 MIR3148,SARAF
SE_02_075200503 chr8:30032143-30039416 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 503 1 200 22 0 11 0 SARAF
SE_02_156701116 chr8:30032444-30036853 Sample_02_1567 iPSCs CiPSC 1116 1 136 18 0 11 0 SARAF
SE_02_075500636 chr8:30032456-30039300 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 636 3 189 21 0 11 0 SARAF
SE_02_157001178 chr8:30032788-30037053 Sample_02_1570 iPSCs EiPSC 1178 3 130 18 0 11 0 SARAF
SE_02_087500278 chr8:30051216-30108172 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 278 13 1481 125 4 120 926 SARAF,LEPROTL1,DCTN6,MBOAT4
SE_02_143100097 chr8:30051258-30111176 Sample_02_1431 Blood T cell 97 14 1550 134 4 123 933 SARAF,LEPROTL1,DCTN6,MBOAT4
SE_02_142901119 chr8:30057229-30104171 Sample_02_1429 Blood GM12878_WT 1119 12 1221 110 2 86 717 SARAF,LEPROTL1,MBOAT4
SE_00_005600241 chr8:30064078-30113878 Sample_00_0056 Sigmoid colon sigmoid colon 3y 241 23 1260 111 5 112 832 SARAF,LEPROTL1,DCTN6,MBOAT4
SE_00_004700022 chr8:30067463-30104476 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 22 13 974 85 2 70 534 SARAF,LEPROTL1,MBOAT4
SE_02_059100016 chr8:30072693-30104213 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 16 15 827 72 1 60 421 SARAF,LEPROTL1,MBOAT4
SE_02_152900822 chr8:30076051-30097098 Sample_02_1529 Peripheral blood neutrophils_0BC75 822 5 569 45 0 53 329 SARAF,LEPROTL1,MBOAT4
SE_02_083600480 chr8:30076075-30100816 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 480 5 668 61 1 54 329 SARAF,LEPROTL1,MBOAT4
SE_02_104000132 chr8:30076197-30100748 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 132 17 663 61 1 54 329 SARAF,LEPROTL1,MBOAT4
SE_02_081700764 chr8:30076517-30100213 Sample_02_0817 Ovary Epithelial ovarian cancer 764 5 645 58 1 54 329 SARAF,LEPROTL1,MBOAT4
SE_02_109500401 chr8:30076957-30100744 Sample_02_1095 Blood CD34 Erythroid cells_Don002 401 4 648 59 1 54 329 SARAF,LEPROTL1,MBOAT4
SE_02_134900145 chr8:30077329-30100789 Sample_02_1349 Leukophereses leukophereses_p411 145 8 640 58 1 54 329 SARAF,LEPROTL1,MBOAT4
SE_02_124900354 chr8:30080477-30095318 Sample_02_1249 Bone marrow RS4_11_DMSO_4h 354 4 409 36 0 25 203 SARAF,MBOAT4,LEPROTL1
SE_02_073600243 chr8:30080818-30093697 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 243 3 357 33 0 21 176 SARAF,LEPROTL1
SE_02_057300396 chr8:30080818-30096136 Sample_02_0573 Blood Nalm6_1 396 2 425 37 0 37 329 SARAF,LEPROTL1,MBOAT4
SE_02_088500729 chr8:30080828-30096554 Sample_02_0885 Blood NALM6_2 729 2 435 37 0 46 329 SARAF,LEPROTL1,MBOAT4
SE_02_125200377 chr8:30080899-30093820 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 377 5 360 33 0 21 176 SARAF,LEPROTL1
SE_02_099300986 chr8:30080949-30093442 Sample_02_0993 Blood MOLM-13_empty 986 3 346 33 0 21 176 SARAF,LEPROTL1
SE_02_057500845 chr8:30080986-30093647 Sample_02_0575 Blood MOLM13_sgLKB1e2 845 3 351 33 0 21 176 SARAF,LEPROTL1
SE_02_125100442 chr8:30081013-30094426 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 442 4 368 33 0 25 176 SARAF,LEPROTL1
Genomic distribution of SEs associated with SARAF
Genome Browser

The strength of the tissue affected by the gene

Expression of SARAF

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)