SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000125910
Gene: S1PR4 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:3172346-3180332 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_000600217 chr19:3132431-3189811 Sample_00_0006 Blood CD14-positive-monocyte 217 11 2206 225 2 74 1870 S1PR4,GNA15,NCLN,GNA11,CELF5
SE_02_015800564 chr19:3132736-3156206 Sample_02_0158 Brain U87_EGFRvIII_erlotinib 564 3 889 94 1 31 791 GNA15,NCLN,GNA11,S1PR4
SE_00_004000361 chr19:3132791-3189435 Sample_00_0040 Spleen spleen_30y 361 12 2177 224 2 74 1870 S1PR4,GNA15,NCLN,GNA11,CELF5
SE_02_016100411 chr19:3132922-3155289 Sample_02_0161 Brain U87 411 3 852 89 1 28 699 GNA15,NCLN,GNA11,S1PR4
SE_01_003600104 chr19:3140670-3177883 Sample_01_0036 Cervix HeLa-S3 104 6 1430 159 2 27 963 GNA15,NCLN,GNA11,CELF5,S1PR4
SE_02_006800189 chr19:3141415-3188086 Sample_02_0068 Skin A375_DMSO 189 7 1797 184 2 66 1640 S1PR4,GNA15,NCLN,GNA11,CELF5
SE_02_138800445 chr19:3157237-3181992 Sample_02_1388 Peripheral blood JB6_ALK+ 445 5 989 103 1 26 898 GNA15,S1PR4,NCLN,LOC100996351,CELF5
SE_04_000100831 chr19:3157443-3201099 Sample_04_0001 Blood heat shocked K562 831 7 1765 166 2 63 1623 GNA15,NCLN,S1PR4,LOC100996351,CELF5
SE_02_134500387 chr19:3159851-3189531 Sample_02_1345 Leukophereses leukophereses_p358 387 12 1129 106 0 43 979 GNA15,NCLN,S1PR4,LOC100996351,CELF5
SE_02_105400709 chr19:3161049-3178239 Sample_02_1054 Esophagus SKGT4 709 7 642 64 0 4 302 GNA15,S1PR4,NCLN,LOC100996351,CELF5
SE_02_102501013 chr19:3161060-3184118 Sample_02_1025 Esophagus KYSE150 1013 4 887 78 0 26 798 GNA15,S1PR4,NCLN,LOC100996351,CELF5
SE_02_153901031 chr19:3161196-3179594 Sample_02_1539 Nasopharyngeal C666-1 1031 9 717 66 0 22 573 GNA15,S1PR4,NCLN,LOC100996351,CELF5
SE_02_147000778 chr19:3161784-3178197 Sample_02_1470 Umbilical Vein H441 778 3 622 62 0 4 302 GNA15,S1PR4,NCLN,LOC100996351,CELF5
SE_01_005200176 chr19:3162899-3192290 Sample_01_0052 Blood neutrophil 176 7 1169 99 1 43 912 S1PR4,GNA15,NCLN,CELF5
SE_02_092700225 chr19:3162918-3191713 Sample_02_0927 Peripheral blood neutrophils_US 225 9 1146 95 1 43 908 GNA15,NCLN,S1PR4,LOC100996351,CELF5,AES
SE_02_153000321 chr19:3162935-3192733 Sample_02_1530 Peripheral blood neutrophils_0BA0X 321 1 1193 99 1 49 1022 GNA15,NCLN,S1PR4,LOC100996351,CELF5,AES
SE_02_078300671 chr19:3163545-3182645 Sample_02_0783 Blood MEC2 671 4 763 63 0 22 575 GNA15,S1PR4,NCLN,LOC100996351,CELF5
SE_01_010400634 chr19:3164089-3189890 Sample_01_0104 Lung upper lobe of left lung 634 5 1010 88 0 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15,NFIC
SE_00_005500248 chr19:3164100-3189815 Sample_00_0055 Spleen spleen 34y 248 6 1005 88 0 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15,NFIC,GNA11,AES
SE_02_081601675 chr19:3164634-3189337 Sample_02_0816 Ovary Clear cell ovarian cancer 1675 9 962 86 0 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_00_003901109 chr19:3164767-3181619 Sample_00_0039 Spleen spleen_3y 1109 4 706 60 0 22 496 S1PR4,NCLN,CELF5,GNA15
SE_02_057500207 chr19:3164889-3194339 Sample_02_0575 Blood MOLM13_sgLKB1e2 207 8 1201 102 1 51 965 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_034700082 chr19:3165013-3191690 Sample_02_0347 Blood AML11 82 4 1077 90 1 39 677 S1PR4,NCLN,CELF5,GNA15
SE_02_057800180 chr19:3165061-3194347 Sample_02_0578 Blood MOLM-13_sgSIK3e4 180 10 1193 100 1 51 965 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_057700290 chr19:3165145-3182352 Sample_02_0577 Blood MOLM13_empty 290 3 703 57 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_068200347 chr19:3165171-3193895 Sample_02_0682 Blood Kasumi-1 347 4 1170 96 1 51 965 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_057400262 chr19:3165263-3194374 Sample_02_0574 Blood MOLM-13_sgNeg2 262 9 1186 98 1 51 965 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_058200189 chr19:3165280-3194373 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 189 6 1186 98 1 51 965 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_102800150 chr19:3165427-3188996 Sample_02_1028 Blood HL-60_WT 150 3 918 75 0 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_134900431 chr19:3165472-3182179 Sample_02_1349 Leukophereses leukophereses_p411 431 3 681 52 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_00_005600887 chr19:3165619-3189856 Sample_00_0056 Sigmoid colon sigmoid colon 3y 887 5 950 78 0 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_075000917 chr19:3165659-3193956 Sample_02_0750 Lymphoma Rec-1_GSI 917 6 1154 91 1 51 965 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_075100706 chr19:3165719-3181839 Sample_02_0751 Lymphoma Rec-1_WO 706 4 666 52 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_133000768 chr19:3165766-3193571 Sample_02_1330 Blood AMU-AML1 768 7 1133 91 1 51 950 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_151200651 chr19:3165931-3178393 Sample_02_1512 Lung Purified AT2 cells 651 3 486 42 0 0 0 S1PR4,NCLN,LOC100996351,CELF5,GNA15,NFIC
SE_02_078400607 chr19:3168804-3182330 Sample_02_0784 Blood OSU-CLL 607 4 513 35 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_078200755 chr19:3169108-3182409 Sample_02_0782 Blood MEC1 755 4 500 33 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_087200357 chr19:3169800-3189971 Sample_02_0872 Colon HCT116_siCtrl-5FU 357 8 748 58 0 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_087300251 chr19:3170641-3190158 Sample_02_0873 Colon HCT116_siGLIS2.1-5FU 251 5 733 55 0 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_051700785 chr19:3171068-3179016 Sample_02_0517 Esophagus TE5 785 1 292 18 0 5 139 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_057300405 chr19:3171572-3182375 Sample_02_0573 Blood Nalm6_1 405 1 425 24 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_088500605 chr19:3171703-3188906 Sample_02_0885 Blood NALM6_2 605 4 641 47 0 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_151400514 chr19:3171739-3178379 Sample_02_1514 Lung Differentiated AT1-like cells 514 2 232 16 0 0 0 S1PR4,NCLN,LOC100996351,CELF5,GNA15,NFIC
SE_02_036200335 chr19:3171847-3189736 Sample_02_0362 Haematopoietic and lymphoid tissue REH 335 4 678 50 0 39 677 S1PR4,NCLN,CELF5,GNA15
SE_02_047700570 chr19:3171936-3190377 Sample_02_0477 Colon intestinal epithelial organoids_139a 570 6 702 50 0 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_024000644 chr19:3171954-3189526 Sample_02_0240 Colon V429_2 644 5 659 48 0 39 677 S1PR4,NCLN,CELF5,GNA15
SE_02_138600472 chr19:3172163-3181821 Sample_02_1386 Peripheral blood Karpas-299_ALK+ 472 5 392 22 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_139400236 chr19:3172234-3181778 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 236 3 391 22 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_047800503 chr19:3172275-3191808 Sample_02_0478 Colon normal colon mucosa 503 5 771 54 1 39 677 NCLN,S1PR4,LOC100996351,CELF5,GNA15
SE_02_151301015 chr19:3172301-3178190 Sample_02_1513 Lung Transitional AT2->1 cells 1015 4 203 13 0 0 0 S1PR4,NCLN,LOC100996351,CELF5,GNA15,NFIC
SE_02_012200269 chr19:3175221-3186960 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 269 1 459 32 0 39 677 S1PR4,NCLN,CELF5,GNA15
SE_02_039601181 chr19:3175394-3177767 Sample_02_0396 Skin NHEK-D 1181 1 97 9 0 0 0 NCLN,CELF5,GNA15,S1PR4
SE_02_073900400 chr19:3175456-3184022 Sample_02_0739 Blood Nalm6 400 1 344 22 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_045400754 chr19:3175544-3185115 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 754 1 378 26 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_075800473 chr19:3175656-3182514 Sample_02_0758 Peripheral blood REH 473 1 292 18 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_045500681 chr19:3176018-3182772 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 681 1 283 13 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_139300707 chr19:3176066-3181829 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 707 2 257 13 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_104900497 chr19:3176115-3183095 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 497 1 288 15 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_104301109 chr19:3176121-3181418 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1109 1 244 12 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_104801137 chr19:3176223-3179902 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1137 1 168 5 0 21 342 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_104700591 chr19:3176267-3181525 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 591 1 242 11 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_045700634 chr19:3176347-3182661 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 634 1 261 11 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_083300384 chr19:3176350-3182450 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 384 1 258 11 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_083400476 chr19:3176378-3182460 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 476 1 257 11 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_101900164 chr19:3176406-3181181 Sample_02_1019 Umbilical cord HUDEP2_Day 164 2 217 10 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_083500348 chr19:3176410-3182288 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 348 1 249 11 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_045900408 chr19:3176429-3181893 Sample_02_0459 Blood ME-1_DMSO_6h 408 1 238 10 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_083600450 chr19:3176712-3181902 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 450 1 232 10 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_083700504 chr19:3176732-3182420 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 504 1 244 10 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_058100228 chr19:3177331-3182240 Sample_02_0581 Blood MOLM13_empty_HG 228 1 214 10 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_099500670 chr19:3177461-3181861 Sample_02_0995 Blood MOLM-13_empty vector 670 1 204 10 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_099300524 chr19:3177522-3181935 Sample_02_0993 Blood MOLM-13_empty 524 1 204 9 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_02_099400669 chr19:3177847-3182120 Sample_02_0994 Blood MOLM13_SIK3TQ 669 1 196 9 0 22 496 S1PR4,NCLN,LOC100996351,CELF5,GNA15
SE_01_008401035 chr19:3178100-3182530 Sample_01_0084 Spleen spleen 1035 1 205 9 0 22 496 S1PR4,NCLN,CELF5,GNA15
SE_02_025500588 chr19:3178123-3181693 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 588 1 185 9 0 22 496 S1PR4,NCLN,CELF5,GNA15
SE_02_012800577 chr19:3178221-3181681 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 577 1 183 9 0 22 496 S1PR4,NCLN,CELF5,GNA15
SE_02_038400048 chr19:3178300-3181445 Sample_02_0384 Blood Ik6pre-BALL+TET-Ik1 48 1 168 8 0 22 496 S1PR4,NCLN,CELF5,GNA15
Genomic distribution of SEs associated with S1PR4
Genome Browser

The strength of the tissue affected by the gene

Expression of S1PR4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)