SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000171863
Gene: RPS7 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:3575260-3580920 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_012400389 chr2:3557057-3577396 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 389 4 655 98 0 16 788 RPS7,RNASEH1,COLEC11
SE_02_077502294 chr2:3560636-3592054 Sample_02_0775 Pancreas EndoC-BH1_SE 2294 5 968 135 0 30 662 RNASEH1-AS1,RPS7,COLEC11,ADI1,RNASEH1
SE_02_109900807 chr2:3563353-3605306 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 807 6 1306 152 1 54 1013 COLEC11,RPS7,RNASEH1-AS1,ADI1,RNASEH1
SE_02_103602132 chr2:3568911-3577308 Sample_02_1036 Mammary gland HCC70_XY018 2132 2 268 28 0 12 289 RPS7,COLEC11,RNASEH1-AS1,RNASEH1,ADI1
SE_02_102501042 chr2:3568940-3577488 Sample_02_1025 Esophagus KYSE150 1042 3 279 31 0 12 289 RPS7,COLEC11,RNASEH1-AS1,RNASEH1,ADI1
SE_02_081601500 chr2:3569191-3596920 Sample_02_0816 Ovary Clear cell ovarian cancer 1500 6 816 85 0 43 709 COLEC11,RPS7,RNASEH1-AS1,RNASEH1,ADI1
SE_02_007600549 chr2:3571438-3587441 Sample_02_0076 Autonomic ganglia SH-SY5Y_DMSO_3h 549 4 531 60 0 28 575 RPS7,COLEC11,RNASEH1
SE_02_139400363 chr2:3574735-3578616 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 363 2 148 14 0 12 360 RPS7,COLEC11,RNASEH1-AS1,RNASEH1
Genomic distribution of SEs associated with RPS7
Genome Browser

The strength of the tissue affected by the gene

Expression of RPS7

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)