Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000135597 |
| Gene: | REPS1 | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chr6:138903493-138988261 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_142900284 | chr6:138911976-138988802 |
Sample_02_1429 | Blood | GM12878_WT | 284 | 24 | 1974 | 245 | 6 | 207 | 817 | REPS1,ABRACL,CCDC28A |
| SE_02_023200351 | chr6:138919005-138987819 |
Sample_02_0232 | Tonsil | ILC3 | 351 | 14 | 1775 | 227 | 5 | 180 | 490 | REPS1,C6ORF115 |
| SE_02_076100313 | chr6:138942448-138993834 |
Sample_02_0761 | Ovary | BIN-67_SMARCA4.T910M | 313 | 22 | 1308 | 157 | 2 | 122 | 523 | REPS1,ABRACL |
| SE_02_017300620 | chr6:138943183-138987706 |
Sample_02_0173 | Lung | IMR-90_senescent | 620 | 8 | 1127 | 138 | 2 | 115 | 303 | REPS1,C6ORF115 |
| SE_01_001800369 | chr6:138944259-138974955 |
Sample_01_0018 | Submandibular Salivary Gland | ACC112 | 369 | 6 | 764 | 99 | 2 | 58 | 162 | REPS1 |
| SE_01_004100709 | chr6:138944601-138987909 |
Sample_01_0041 | Skin | keratinocyte | 709 | 5 | 1109 | 135 | 2 | 74 | 296 | REPS1,C6ORF115 |
| SE_02_076000411 | chr6:138944628-138989015 |
Sample_02_0760 | Ovary | BIN-67_SMARCA4 | 411 | 18 | 1140 | 137 | 2 | 77 | 447 | REPS1,ABRACL |
| SE_02_137801132 | chr6:138944678-138974857 |
Sample_02_1378 | Pancreas | Pancreatic_tumor_associated_fibroblasts_CAF08_untreated | 1132 | 12 | 756 | 97 | 2 | 39 | 133 | REPS1 |
| SE_02_157300631 | chr6:138944854-138986270 |
Sample_02_1573 | Endothelial | Undifferentiated Pleomorphic Sarcoma | 631 | 19 | 1058 | 125 | 2 | 54 | 128 | REPS1,ABRACL |
| SE_02_143801225 | chr6:138944899-138988256 |
Sample_02_1438 | Liver | LSEC | 1225 | 11 | 1117 | 134 | 2 | 74 | 381 | REPS1,ABRACL |
| SE_02_143601387 | chr6:138944932-138975292 |
Sample_02_1436 | Liver | LSEC-Ctrl | 1387 | 9 | 762 | 98 | 2 | 39 | 128 | REPS1 |
| SE_02_010100945 | chr6:138946222-138988795 |
Sample_02_0101 | Peripheral blood | Macrophages_GM-CSF_72h_IFN-y | 945 | 4 | 1099 | 134 | 2 | 71 | 340 | REPS1,C6ORF115 |
| SE_02_010700579 | chr6:138952225-138989164 |
Sample_02_0107 | Endometrium | EEC16 | 579 | 4 | 959 | 114 | 1 | 62 | 312 | REPS1,C6ORF115 |
| SE_02_043300250 | chr6:138960435-138989346 |
Sample_02_0433 | Lung | NCI-H1299_EGFP-NEO_reporter_cells_DAC | 250 | 6 | 742 | 88 | 1 | 61 | 312 | REPS1,C6ORF115 |
| SE_02_042000565 | chr6:138962519-138984994 |
Sample_02_0420 | Pectoralis major muscle | LHCN-M2_dox_6h | 565 | 6 | 577 | 67 | 1 | 34 | 0 | REPS1,C6ORF115 |
| SE_02_042200191 | chr6:138963022-138989373 |
Sample_02_0422 | Lung | NCI-H1299_EGFP-NEO_reporter_cells_DACSB | 191 | 4 | 684 | 81 | 1 | 58 | 312 | REPS1,C6ORF115 |
| SE_02_116700343 | chr6:138963352-139000438 |
Sample_02_1167 | Biliary | H69_TGF Vehicle_1 | 343 | 16 | 976 | 109 | 1 | 62 | 312 | REPS1,ABRACL |
| SE_02_026000223 | chr6:138963830-138989353 |
Sample_02_0260 | Lung | NCI-H1299_EGFP-NEO_reporter_cells_SB939 | 223 | 6 | 656 | 78 | 1 | 58 | 312 | REPS1,C6ORF115 |
| SE_02_031300318 | chr6:138965553-138989349 |
Sample_02_0313 | Neuroblastoma | SK-N-DZ | 318 | 3 | 608 | 70 | 0 | 45 | 312 | REPS1,C6ORF115 |
| SE_02_007500392 | chr6:138966000-138988977 |
Sample_02_0075 | Autonomic ganglia | kelly_DMSO_3h | 392 | 6 | 587 | 69 | 0 | 44 | 312 | REPS1,C6ORF115 |
| SE_02_030900269 | chr6:138966687-138989172 |
Sample_02_0309 | Neuroblastoma | SJNB6 | 269 | 4 | 574 | 68 | 0 | 44 | 312 | REPS1,C6ORF115 |
| SE_02_141300466 | chr6:138966784-138989136 |
Sample_02_1413 | Muscle | RH4_sgBRG1 | 466 | 13 | 572 | 68 | 0 | 44 | 312 | REPS1,ABRACL |
| SE_02_022000351 | chr6:138967112-138988842 |
Sample_02_0220 | Brain | BE2C_1 | 351 | 4 | 552 | 66 | 0 | 44 | 312 | REPS1,C6ORF115 |
| SE_02_025900252 | chr6:138967345-138989353 |
Sample_02_0259 | Lung | NCI-H1299_EGFP-NEO_reporter_cells_SAHA | 252 | 3 | 561 | 66 | 0 | 44 | 312 | REPS1,C6ORF115 |
| SE_02_116600591 | chr6:138967820-138996465 |
Sample_02_1166 | Biliary | H69_TGF beta_16h_1 | 591 | 12 | 737 | 85 | 0 | 48 | 312 | REPS1,ABRACL |
| SE_02_118700714 | chr6:138967978-138994276 |
Sample_02_1187 | Brain | GBM16 | 714 | 11 | 684 | 79 | 0 | 47 | 312 | REPS1,ABRACL |
| SE_02_025800280 | chr6:138968148-138989280 |
Sample_02_0258 | Lung | NCI-H1299_EGFP-NEO_reporter_cells_DMSO | 280 | 7 | 537 | 62 | 0 | 44 | 312 | REPS1,C6ORF115 |
| SE_02_095600464 | chr6:138968330-138988704 |
Sample_02_0956 | Brain | IDH1_2658 | 464 | 6 | 518 | 61 | 0 | 44 | 312 | REPS1,ABRACL |
| SE_02_116800332 | chr6:138968362-139000545 |
Sample_02_1168 | Biliary | H69_TGF Vehicle_2 | 332 | 16 | 837 | 89 | 0 | 48 | 312 | REPS1,ABRACL |
| SE_02_116900618 | chr6:138968870-138997547 |
Sample_02_1169 | Biliary | H69_TGF beta_16h_2 | 618 | 8 | 748 | 82 | 0 | 48 | 312 | REPS1,ABRACL |
| SE_02_006500605 | chr6:138970221-138987430 |
Sample_02_0065 | Embryo | KO2-Late_G1 | 605 | 3 | 444 | 54 | 0 | 21 | 30 | REPS1,C6ORF115 |
| SE_02_058400593 | chr6:138970514-138989058 |
Sample_02_0584 | Lung | H1299 WT | 593 | 2 | 477 | 55 | 0 | 40 | 312 | REPS1,ABRACL |
| SE_02_103601376 | chr6:138970590-138992889 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 1376 | 6 | 578 | 67 | 0 | 43 | 312 | REPS1,ABRACL |
| SE_02_068701032 | chr6:138971691-138990849 |
Sample_02_0687 | Lung | NCI-H146_no infection | 1032 | 4 | 497 | 56 | 0 | 42 | 312 | REPS1,ABRACL |
| SE_02_087500493 | chr6:138982522-139031779 |
Sample_02_0875 | Peripheral blood | Peripheral blood-derived mast cells | 493 | 12 | 1349 | 131 | 3 | 88 | 450 | REPS1,ABRACL |
| SE_02_032500363 | chr6:138984591-139020867 |
Sample_02_0325 | Liver | hepatocytes_d1 | 363 | 3 | 991 | 87 | 2 | 51 | 312 | REPS1,C6ORF115 |
Genomic distribution of SEs associated with REPS1