Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000203867
Gene: RBM20 Gene type: protein_coding
Strand: + External links:
Genomic region: chr10:110644336-110839468 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_038200001 chr10:110608196-110838303 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 1 17 6677 411 38 716 1882 RBM20,SMC3,LOC282997,PDCD4
SE_02_038100003 chr10:110609180-110845593 Sample_02_0381 Heart purified cardiomyocyte WT 3 29 6838 418 38 739 2039 RBM20,SMC3,LOC282997,PDCD4
SE_02_004000808 chr10:110609419-110645596 Sample_02_0040 Embryo PFG 808 6 977 46 2 140 239 RBM20,SMC3
SE_01_011200227 chr10:110609613-110651916 Sample_01_0112 Embryonic kidney HEK293_encode 227 12 1136 53 2 181 239 RBM20,SMC3
SE_01_005300379 chr10:110610500-110659232 Sample_01_0053 Haematopoietic and lymphoid tissue OCI-LY1 379 8 1309 65 2 184 239 RBM20,SMC3
SE_02_055300292 chr10:110612139-110662580 Sample_02_0553 Other HSSY2 shCt 292 16 1362 69 3 186 239 RBM20,SMC3
SE_02_043600155 chr10:110614160-110672936 Sample_02_0436 Kidney HEK293A_empty-vector_DMSO_6h 155 9 1597 83 6 210 239 RBM20,SMC3
SE_02_074100119 chr10:110614172-110681702 Sample_02_0741 Muscle RH30 119 15 1897 97 11 226 239 RBM20,SMC3
SE_01_009301013 chr10:110628615-110687329 Sample_01_0093 Aorta ascending aorta 1013 18 1645 93 10 225 239 RBM20
SE_01_008100004 chr10:110628767-110839007 Sample_01_0081 Right atrium auricular region right-atrium-auricular-region 4 18 6100 391 37 691 1976 RBM20,LOC282997,PDCD4
SE_02_090400004 chr10:110629237-110838808 Sample_02_0904 Heart left ventricle_DCM_LV1028 4 80 6088 390 37 688 1964 RBM20,PDCD4-AS1,PDCD4
SE_02_089700006 chr10:110629272-110840150 Sample_02_0897 Heart left ventricle_LV1325 6 93 6117 392 37 697 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_092500001 chr10:110629296-110841215 Sample_02_0925 Heart fetal heart_PCW17_12570 1 99 6141 392 37 701 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_090500006 chr10:110629354-110838293 Sample_02_0905 Heart left ventricle_DCM_LV1033 6 75 6077 390 37 686 1882 RBM20,PDCD4-AS1,PDCD4
SE_02_091300006 chr10:110629359-110843568 Sample_02_0913 Heart left ventricle_DCM_LV1304 6 90 6199 396 37 709 2039 RBM20,PDCD4-AS1,PDCD4
SE_01_007800083 chr10:110629367-110803616 Sample_01_0078 Heart left ventricle heart-left-ventricle 83 25 5083 323 36 569 863 RBM20
SE_02_092200001 chr10:110629370-110840836 Sample_02_0922 Heart fetal heart_PCW10_12434 1 79 6135 392 37 700 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_089200006 chr10:110629377-110842590 Sample_02_0892 Heart left ventricle_LV1215 6 101 6182 394 37 706 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_092400002 chr10:110629378-110842661 Sample_02_0924 Heart fetal heart_PCW10_12569 2 87 6184 394 37 706 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_074700004 chr10:110629380-110861019 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 4 152 6675 432 39 770 2039 RBM20,PDCD4-AS1,MIR4680,PDCD4
SE_02_091000006 chr10:110629427-110843376 Sample_02_0910 Heart left ventricle_DCM_LV1275 6 102 6198 396 37 709 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_090700006 chr10:110629436-110843220 Sample_02_0907 Heart left ventricle_DCM_LV1223 6 89 6195 395 37 706 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_074600769 chr10:110629450-110651804 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 769 4 577 34 1 152 239 RBM20
SE_02_074500914 chr10:110629474-110641226 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 914 3 298 19 1 60 0 RBM20
SE_02_089800002 chr10:110629476-110840762 Sample_02_0898 Heart left ventricle_LV1356 2 80 6131 390 37 700 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_090300005 chr10:110629479-110838255 Sample_02_0903 Heart left ventricle_DCM_LV1009 5 103 6074 388 37 686 1881 RBM20,PDCD4-AS1,PDCD4
SE_01_009800004 chr10:110629482-110840059 Sample_01_0098 Heart left ventricle_51y 4 63 6111 390 37 697 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_090100008 chr10:110629505-110838394 Sample_02_0901 Heart left ventricle_LV1471 8 109 6076 388 37 686 1893 RBM20,PDCD4-AS1,PDCD4
SE_02_091200007 chr10:110629506-110843280 Sample_02_0912 Heart left ventricle_DCM_LV1300 7 98 6196 394 37 709 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_089100005 chr10:110629521-110841093 Sample_02_0891 Heart left ventricle_LV1202 5 115 6138 390 37 701 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_089400003 chr10:110629523-110838099 Sample_02_0894 Heart left ventricle_LV1248 3 80 6070 388 37 686 1866 RBM20,PDCD4-AS1,PDCD4
SE_02_089300004 chr10:110629527-110839805 Sample_02_0893 Heart left ventricle_LV1226 4 87 6105 389 37 697 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_088800005 chr10:110629532-110838263 Sample_02_0888 Heart left ventricle_LV1160 5 100 6075 388 37 686 1881 RBM20,PDCD4-AS1,PDCD4
SE_02_088900005 chr10:110629541-110843226 Sample_02_0889 Heart left ventricle_LV1183 5 73 6194 393 37 706 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_089600009 chr10:110629554-110841165 Sample_02_0896 Heart left ventricle_LV1294 9 111 6139 390 37 701 2039 RBM20,PDCD4-AS1,PDCD4
SE_00_002100002 chr10:110629564-110834866 Sample_00_0021 Lung lung_3y 2 61 5973 381 37 680 1519 RBM20,LOC282997,PDCD4
SE_02_089000006 chr10:110629567-110838454 Sample_02_0890 Heart left ventricle_LV1200 6 102 6077 388 37 688 1905 RBM20,PDCD4-AS1,PDCD4
SE_00_005200002 chr10:110629575-110838054 Sample_00_0052 Heart left ventricle 3y 2 135 6069 388 37 686 1858 RBM20,PDCD4-AS1,PDCD4
SE_02_091100006 chr10:110629579-110839774 Sample_02_0911 Heart left ventricle_DCM_LV1290 6 125 6105 389 37 697 2039 RBM20,PDCD4-AS1,PDCD4
SE_01_007600382 chr10:110629582-110786114 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 382 23 4510 295 35 503 760 RBM20
SE_02_090600006 chr10:110629604-110841851 Sample_02_0906 Heart left ventricle_DCM_LV1072 6 85 6151 390 37 702 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_090800018 chr10:110629638-110843374 Sample_02_0908 Heart left ventricle_DCM_LV1262 18 122 6196 394 37 709 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_090901231 chr10:110629646-110651742 Sample_02_0909 Heart left ventricle_DCM_LV1264 1231 9 575 33 1 152 239 RBM20
SE_02_092000005 chr10:110629650-110838016 Sample_02_0920 Heart left ventricle_DCM_LV1535 5 104 6066 388 37 686 1856 RBM20,PDCD4-AS1,PDCD4
SE_02_090200008 chr10:110629651-110838496 Sample_02_0902 Heart left ventricle_LV1558 8 104 6077 388 37 688 1913 RBM20,PDCD4-AS1,PDCD4
SE_02_091600006 chr10:110629652-110838707 Sample_02_0916 Heart left ventricle_DCM_LV1392 6 81 6082 388 37 688 1949 RBM20,PDCD4-AS1,PDCD4
SE_02_091800014 chr10:110629678-110795611 Sample_02_0918 Heart left ventricle_DCM_LV1437 14 65 4784 302 36 532 760 RBM20
SE_02_091700005 chr10:110629691-110842769 Sample_02_0917 Heart left ventricle_DCM_LV1433 5 102 6182 392 37 706 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_088700004 chr10:110629700-110838593 Sample_02_0887 Heart left ventricle_LV1121 4 82 6078 388 37 688 1920 RBM20,PDCD4-AS1,PDCD4
SE_00_003400007 chr10:110629712-110841363 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 7 66 6137 389 37 701 2039 RBM20,LOC282997,PDCD4
SE_02_036800133 chr10:110629776-110734462 Sample_02_0368 Skeletal muscle NS134 133 16 3030 170 33 350 239 RBM20
SE_01_009700091 chr10:110629785-110785191 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 91 31 4479 294 35 503 760 RBM20
SE_01_009400208 chr10:110629836-110785407 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 208 38 4481 294 35 503 760 RBM20
SE_00_004600020 chr10:110629838-110837880 Sample_00_0046 Heart right ventricle_34y 20 108 6054 387 37 686 1840 RBM20,PDCD4-AS1,PDCD4
SE_02_091900005 chr10:110630135-110840787 Sample_02_0919 Heart left ventricle_DCM_LV1532 5 96 6110 389 37 692 2039 RBM20,PDCD4-AS1,PDCD4
SE_02_090000012 chr10:110630148-110838115 Sample_02_0900 Heart left ventricle_LV1452 12 89 6049 387 37 678 1867 RBM20,PDCD4-AS1,PDCD4
SE_02_089500006 chr10:110630228-110794776 Sample_02_0895 Heart left ventricle_LV1259 6 58 4742 301 36 518 760 RBM20
SE_02_099700026 chr10:110630398-110645014 Sample_02_0997 iPSCs iPSC Derived Cardiomyocytes_4N 26 4 372 24 1 97 239 RBM20
SE_02_150300310 chr10:110632645-110667891 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 310 9 943 60 4 151 239 RBM20
SE_02_031200562 chr10:110634077-110681433 Sample_02_0312 Neuroblastoma SK-N-BE_2-C 562 8 1345 80 9 184 239 RBM20
SE_02_034100333 chr10:110634236-110673203 Sample_02_0341 Autonomic ganglia SH-SY5Y_untreat 333 4 1051 67 4 170 239 RBM20
SE_02_031000394 chr10:110634423-110665947 Sample_02_0310 Neuroblastoma SJNB8 394 4 842 56 2 146 239 RBM20
SE_02_029600269 chr10:110634449-110665911 Sample_02_0296 Neuroblastoma CLB-BER-Lud 269 3 839 56 2 146 239 RBM20
SE_02_099900626 chr10:110634612-110682700 Sample_02_0999 Lymphoma OCI-LY1_966 626 20 1366 83 9 190 239 RBM20
SE_02_110400338 chr10:110634670-110680752 Sample_02_1104 Brain NB-69 338 16 1303 77 9 179 239 RBM20
SE_02_150100249 chr10:110634708-110667752 Sample_02_1501 Brain SHEP-21N_NOSPIKE 249 9 887 59 4 147 239 RBM20
SE_02_030000409 chr10:110634744-110665659 Sample_02_0300 Neuroblastoma CLB-PE 409 3 826 56 2 146 239 RBM20
SE_02_149700167 chr10:110634819-110666503 Sample_02_1497 Brain SHEP-21N 167 10 848 57 2 146 239 RBM20
SE_02_149800192 chr10:110635076-110666146 Sample_02_1498 Brain SHEP-21N_DOX_2h 192 7 831 55 2 141 239 RBM20
SE_02_150200344 chr10:110635205-110666024 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 344 7 825 55 2 140 239 RBM20
SE_00_005700010 chr10:110635245-110837369 Sample_00_0057 Heart right ventricle 3y 10 155 5899 383 36 665 1778 RBM20,PDCD4-AS1,PDCD4
SE_02_040800560 chr10:110635970-110669417 Sample_02_0408 Kidney G401_Dox 560 7 906 59 4 163 239 RBM20
SE_02_150700183 chr10:110636020-110665480 Sample_02_1507 Brain SHEP-21N_DOX_24h 183 9 789 52 2 139 239 RBM20
SE_02_074400503 chr10:110636102-110641286 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 503 4 124 12 0 39 0 RBM20
SE_02_054100206 chr10:110636385-110672849 Sample_02_0541 Brain Kelly_NaiveJQ1 206 8 996 63 4 163 239 RBM20
SE_02_150600501 chr10:110636409-110666063 Sample_02_1506 Brain SHEP with tetracycline inducible MYC_DOX_6HR 501 8 796 52 2 139 239 RBM20
SE_02_105801120 chr10:110636520-110676987 Sample_02_1058 Bone A673_SA2 Rescue 1120 10 1130 67 7 163 239 RBM20
SE_02_029800538 chr10:110636626-110649061 Sample_02_0298 Neuroblastoma CLB-GA 538 2 322 24 0 114 239 RBM20
SE_02_030900181 chr10:110636760-110665422 Sample_02_0309 Neuroblastoma SJNB6 181 7 775 52 2 139 239 RBM20
SE_02_150000467 chr10:110637099-110672738 Sample_02_1500 Brain KELLY_untreat 467 13 980 62 4 148 239 RBM20
SE_02_116300029 chr10:110637473-110672688 Sample_02_1163 Embryonic kidney HEK293 no dox 29 7 970 61 4 139 239 RBM20
SE_02_092300347 chr10:110640399-110653502 Sample_02_0923 Heart fetal heart_PCW10_12522 347 1 342 16 0 95 239 RBM20
SE_02_092100489 chr10:110640413-110654207 Sample_02_0921 Heart embryonic heart_CS22 489 1 354 18 0 95 239 RBM20
SE_04_000200909 chr10:110640652-110673387 Sample_04_0002 Blood cold shocked K562 909 6 899 52 4 124 239 RBM20,SMC3
SE_02_022000307 chr10:110643145-110652451 Sample_02_0220 Brain BE2C_1 307 3 249 12 0 83 190 RBM20
SE_02_033900391 chr10:110643377-110652593 Sample_02_0339 Neuroblastoma NGP 391 2 250 11 0 83 190 RBM20
SE_02_058000957 chr10:110643639-110679772 Sample_02_0580 Blood HEL_sgSIK3e4 957 8 1035 55 9 114 190 RBM20
SE_02_057900936 chr10:110643749-110673122 Sample_02_0579 Blood HEL_sgNeg2 936 6 819 47 4 113 190 RBM20
SE_02_075000869 chr10:110643751-110653094 Sample_02_0750 Lymphoma Rec-1_GSI 869 2 253 11 0 83 190 RBM20
SE_02_057600745 chr10:110643781-110674148 Sample_02_0576 Blood HEL_sgLKB1e2 745 5 856 48 4 113 190 RBM20
SE_02_054500955 chr10:110643955-110672979 Sample_02_0545 Bone marrow K562 WT 955 7 811 46 4 110 190 RBM20,SMC3
SE_02_094300320 chr10:110648759-110686062 Sample_02_0943 Brain LNZ308 320 13 1098 59 9 90 0 RBM20
SE_02_036700398 chr10:110651476-110734633 Sample_02_0367 Skeletal muscle NS129 398 13 2472 138 32 198 0 RBM20
SE_02_032800536 chr10:110664104-110685791 Sample_02_0328 Embryo H9_naive 536 3 655 32 8 62 0 RBM20
SE_00_003200047 chr10:110664160-110734545 Sample_00_0032 Psoas muscle psoas-muscle_30y 47 16 2111 113 31 190 0 RBM20
SE_02_092100655 chr10:110664269-110674780 Sample_02_0921 Heart embryonic heart_CS22 655 1 311 14 3 24 0 RBM20
SE_02_037200426 chr10:110664323-110699814 Sample_02_0372 Skeletal muscle RMS008 426 6 1039 58 16 111 0 RBM20
SE_02_091400033 chr10:110664464-110803354 Sample_02_0914 Heart left ventricle_DCM_LV1342 33 53 4130 260 34 409 624 RBM20
SE_02_092300631 chr10:110664562-110674550 Sample_02_0923 Heart fetal heart_PCW10_12522 631 1 295 14 3 24 0 RBM20
SE_02_108100386 chr10:110664582-110706808 Sample_02_1081 Muscle CTR shCtrl 386 11 1232 70 21 118 0 RBM20
SE_02_087700451 chr10:110664847-110707006 Sample_02_0877 Muscle SMS-CTR_CASZ1b_Dox 451 9 1224 70 21 124 0 RBM20
SE_02_090900020 chr10:110664943-110803048 Sample_02_0909 Heart left ventricle_DCM_LV1264 20 63 4103 260 34 409 624 RBM20
SE_01_011500750 chr10:110665223-110686689 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 750 5 656 33 8 62 0 RBM20
SE_02_089900084 chr10:110666011-110804391 Sample_02_0899 Heart left ventricle_LV1400 84 48 4130 262 33 409 624 RBM20
SE_02_091500108 chr10:110666309-110803187 Sample_02_0915 Heart left ventricle_DCM_LV1371 108 49 4075 259 33 409 624 RBM20
SE_02_036600299 chr10:110666609-110734350 Sample_02_0366 Skeletal muscle NCI0082 299 8 2037 109 30 190 0 RBM20
SE_02_074600144 chr10:110667008-110746366 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 144 26 2405 155 31 199 0 RBM20
SE_01_002300107 chr10:110667316-110704403 Sample_01_0023 Embryo cardiac-muscle-cell 107 4 1091 64 16 116 0 RBM20
SE_02_074500537 chr10:110667392-110702826 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 537 7 1049 62 15 116 0 RBM20
SE_02_092100841 chr10:110678318-110688421 Sample_02_0921 Heart embryonic heart_CS22 841 1 320 16 1 43 0 RBM20
SE_02_037000454 chr10:110678425-110727301 Sample_02_0370 Skeletal muscle RH4 454 8 1466 81 23 149 0 RBM20
SE_02_092300853 chr10:110678933-110687700 Sample_02_0923 Heart fetal heart_PCW10_12522 853 1 281 15 0 42 0 RBM20
SE_02_141300652 chr10:110679100-110734005 Sample_02_1413 Muscle RH4_sgBRG1 652 14 1654 93 23 165 0 RBM20
SE_02_150300977 chr10:110681412-110726860 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 977 14 1323 74 22 136 0 RBM20
SE_02_150200988 chr10:110685196-110725538 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 988 10 1187 66 22 110 0 RBM20
SE_02_092100854 chr10:110693895-110704085 Sample_02_0921 Heart embryonic heart_CS22 854 1 302 24 8 44 0 RBM20
SE_02_092301107 chr10:110695127-110704147 Sample_02_0923 Heart fetal heart_PCW10_12522 1107 1 271 22 7 39 0 RBM20
SE_02_075500896 chr10:110699134-110703982 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 896 1 157 10 3 7 0 RBM20
SE_02_003800533 chr10:110699565-110703959 Sample_02_0038 Embryo DE 533 1 138 9 2 6 0 RBM20
SE_02_074100450 chr10:110704636-110741213 Sample_02_0741 Muscle RH30 450 7 1148 76 15 80 0 RBM20

Genomic distribution of SEs associated with RBM20

The strength of the tissue affected by the gene


Expression of RBM20