SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID:
Gene: RAGE Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_008700056 chr14:102184152-102323932 Sample_02_0087 Pancreas MiaPaca2 56 6 4034 335 5 235 2765 WDR20,ZNF839,RAGE,TECPR2,CINP,HSP90AA1
SE_02_031700012 chr14:102211888-102321084 Sample_02_0317 Neuroblastoma GICAN 12 9 3195 277 3 99 2335 ZNF839,RAGE,WDR20,TECPR2,CINP
SE_02_011000292 chr14:102214137-102318142 Sample_02_0110 Ovaries IOE11 292 12 3040 268 3 88 1700 RAGE,WDR20,TECPR2,CINP,ZNF839
SE_02_018200659 chr14:102220877-102242185 Sample_02_0182 melanoma LOX-IMVI 659 4 704 68 1 34 1054 RAGE,WDR20
SE_02_030100110 chr14:102232757-102318699 Sample_02_0301 Neuroblastoma GIMEN 110 10 2418 211 2 42 820 RAGE,TECPR2,CINP,ZNF839
SE_02_018500797 chr14:102234001-102265333 Sample_02_0185 Skin UACC257 797 6 881 85 1 11 334 RAGE
SE_02_007300086 chr14:102234080-102318232 Sample_02_0073 Other 90-8TL_DMSO 86 14 2361 207 2 40 719 RAGE,TECPR2,CINP,ZNF839
SE_02_006800646 chr14:102234158-102265267 Sample_02_0068 Skin A375_DMSO 646 13 872 85 1 11 334 RAGE
SE_02_009500084 chr14:102234715-102318575 Sample_02_0095 Mammary gland MDA-MB-468 84 18 2342 209 2 40 719 RAGE,TECPR2,CINP,ZNF839
SE_02_026800086 chr14:102235777-102317708 Sample_02_0268 Kidney A-498 86 28 2283 204 1 40 700 RAGE,TECPR2,CINP,ZNF839
SE_02_001100155 chr14:102235974-102316880 Sample_02_0011 Kidney A-498_wtVHL 155 22 2247 201 1 40 534 RAGE,TECPR2,CINP,ZNF839
SE_02_018300593 chr14:102242806-102265621 Sample_02_0183 Skin SKMEL2 593 8 619 60 1 11 177 RAGE
SE_01_001900569 chr14:102248620-102295749 Sample_01_0019 Brain and spinal cord astrocyte 569 6 1298 115 1 28 235 RAGE,ZNF839
SE_02_001000212 chr14:102248729-102316978 Sample_02_0010 Kidney A-498_emptyvector 212 15 1886 164 1 40 392 RAGE,TECPR2,CINP,ZNF839
SE_02_043300121 chr14:102252529-102320822 Sample_02_0433 Lung NCI-H1299_EGFP-NEO_reporter_cells_DAC 121 12 1887 158 1 44 668 ZNF839,RAGE,TECPR2,CINP
SE_02_020900642 chr14:102252963-102295835 Sample_02_0209 Lung MRC-5_MRC5_1DPT 642 9 1170 98 0 24 79 RAGE,ZNF839
SE_02_010700170 chr14:102254110-102318017 Sample_02_0107 Endometrium EEC16 170 6 1766 147 1 35 406 RAGE,TECPR2,CINP,ZNF839
SE_02_026300209 chr14:102254263-102318025 Sample_02_0263 Osteoblastic hFOB_undifferentiated 209 9 1762 146 1 35 406 RAGE,TECPR2,CINP,ZNF839
SE_02_011600074 chr14:102254343-102321033 Sample_02_0116 Mammary gland MDA-MB-231_untreat 74 14 1841 151 1 44 668 ZNF839,RAGE,TECPR2,CINP
SE_02_042200076 chr14:102254391-102321427 Sample_02_0422 Lung NCI-H1299_EGFP-NEO_reporter_cells_DACSB 76 8 1849 152 1 45 668 ZNF839,RAGE,TECPR2,CINP
SE_02_030500441 chr14:102254440-102296341 Sample_02_0305 Neuroblastoma SH-EP 441 5 1139 94 0 24 79 RAGE,ZNF839
SE_02_027400368 chr14:102254646-102295477 Sample_02_0274 Endometriosis hTERT_KD 368 6 1114 91 0 22 79 RAGE,ZNF839
SE_02_011100266 chr14:102254858-102305907 Sample_02_0111 Ovaries IOE4 266 6 1396 113 0 34 221 RAGE,ZNF839
SE_02_005400500 chr14:102254891-102283266 Sample_02_0054 Lung IMR-90_DMSO_1 500 4 723 63 0 13 45 RAGE,ZNF839
SE_02_005500757 chr14:102254948-102282604 Sample_02_0055 Lung IMR-90_Nutlin-3a 757 4 698 62 0 13 45 RAGE,ZNF839
SE_02_039500036 chr14:102254998-102321066 Sample_02_0395 Mammary gland BT-549 36 14 1815 147 1 44 668 ZNF839,RAGE,TECPR2,CINP
SE_02_005600850 chr14:102255000-102283384 Sample_02_0056 Mammary gland HMEC 850 6 721 63 0 13 51 RAGE,ZNF839
SE_02_008000173 chr14:102255141-102318094 Sample_02_0080 Lung Calu-3 173 16 1731 141 1 35 406 RAGE,TECPR2,CINP,ZNF839
SE_01_001800123 chr14:102255230-102317714 Sample_01_0018 Submandibular Salivary Gland ACC112 123 10 1720 138 0 35 387 RAGE,TECPR2,CINP,ZNF839
SE_02_005700149 chr14:102255268-102315105 Sample_02_0057 Mammary gland vHMEC 149 9 1651 127 0 35 221 RAGE,TECPR2,CINP,ZNF839
SE_02_041900577 chr14:102255312-102295932 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 577 8 1101 87 0 24 79 RAGE,ZNF839
SE_02_010800164 chr14:102255322-102317747 Sample_02_0108 Fallopian tube FT246 164 9 1720 138 0 35 392 RAGE,TECPR2,CINP,ZNF839
SE_02_018200412 chr14:102255446-102284898 Sample_02_0182 melanoma LOX-IMVI 412 9 750 66 0 20 79 RAGE,ZNF839
SE_02_015100078 chr14:102258575-102285788 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 78 2 698 60 0 20 79 RAGE,ZNF839
SE_02_015000392 chr14:102260175-102285073 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 392 2 634 58 0 20 79 RAGE,ZNF839
SE_02_016600533 chr14:102260863-102295536 Sample_02_0166 Mammary gland HCC1954_Parental 533 6 952 79 0 22 79 RAGE,ZNF839
SE_01_005800116 chr14:102260988-102318450 Sample_01_0058 Prostate PC-3 116 7 1591 133 1 35 406 RAGE,TECPR2,CINP,ZNF839
SE_02_042300796 chr14:102261333-102282392 Sample_02_0423 Skin A375 796 5 536 52 0 13 45 RAGE,ZNF839
SE_02_000500144 chr14:102261346-102285006 Sample_02_0005 Cervical cervical-cancer_KDM5C 144 2 607 58 0 20 79 RAGE,ZNF839
SE_02_025900410 chr14:102261416-102285714 Sample_02_0259 Lung NCI-H1299_EGFP-NEO_reporter_cells_SAHA 410 2 626 58 0 20 79 RAGE,ZNF839
SE_02_025800162 chr14:102261458-102320821 Sample_02_0258 Lung NCI-H1299_EGFP-NEO_reporter_cells_DMSO 162 7 1650 137 1 44 668 ZNF839,RAGE,TECPR2,CINP
SE_02_027000389 chr14:102261601-102281459 Sample_02_0270 Kidney PCS-400 389 8 505 46 0 13 45 RAGE,ZNF839
SE_02_006900151 chr14:102262031-102321524 Sample_02_0069 Brain SF268 151 10 1653 137 1 45 668 ZNF839,RAGE,TECPR2,CINP
SE_02_026000375 chr14:102262044-102295485 Sample_02_0260 Lung NCI-H1299_EGFP-NEO_reporter_cells_SB939 375 5 924 78 0 22 79 RAGE,ZNF839
SE_02_000900193 chr14:102270271-102302373 Sample_02_0009 Kidney 786-O_wtVHL 193 10 947 77 0 11 34 RAGE,ZNF839
SE_01_005600267 chr14:102270591-102317453 Sample_01_0056 Bone osteoblast 267 6 1346 107 0 22 287 RAGE,TECPR2,CINP,ZNF839
SE_01_005900208 chr14:102277260-102295030 Sample_01_0059 Lung PC-9 208 2 520 43 0 9 34 RAGE,ZNF839
SE_02_000600213 chr14:102279050-102280769 Sample_02_0006 Cervical cervical-cancer_parental 213 2 43 6 0 0 0 RAGE,ZNF839
SE_00_002001597 chr14:102292345-102323958 Sample_00_0020 Large intestine large-intestine_108d 1597 4 922 70 1 25 589 ZNF839,RAGE,TECPR2,CINP
SE_00_003601373 chr14:102292358-102323438 Sample_00_0036 Small intestine small-intestine_108days 1373 4 907 69 1 25 589 ZNF839,RAGE,TECPR2,CINP
Genomic distribution of SEs associated with RAGE
Genome Browser

The strength of the tissue affected by the gene

Expression of RAGE

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)