Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000061455 |
| Gene: | PRDM6 | Gene type: | protein_coding |
| Strand: | + | External links: |
|
| Genomic region: | chr5:123089241-123194266 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_01_011000025 | chr5:123082492-123229887 |
Sample_01_0110 | Aorta | thoracic aorta_37y | 25 | 66 | 4187 | 323 | 27 | 1074 | 945 | PRDM6,PPIC |
| SE_02_043600503 | chr5:123084373-123091478 |
Sample_02_0436 | Kidney | HEK293A_empty-vector_DMSO_6h | 503 | 2 | 238 | 26 | 1 | 84 | 391 | PRDM6,PPIC |
| SE_01_009300024 | chr5:123085316-123230117 |
Sample_01_0093 | Aorta | ascending aorta | 24 | 32 | 4107 | 315 | 27 | 1064 | 945 | PRDM6,PPIC |
| SE_01_008600042 | chr5:123086916-123230202 |
Sample_01_0086 | Thoracic aorta | thoracic-aorta | 42 | 9 | 4071 | 310 | 27 | 1041 | 945 | PRDM6 |
| SE_01_007000039 | chr5:123086940-123230015 |
Sample_01_0070 | Ascending aorta | ascending-aorta | 39 | 15 | 4064 | 310 | 26 | 1041 | 945 | PRDM6 |
| SE_01_010200138 | chr5:123089166-123100392 |
Sample_01_0102 | Artery | tibial artery | 138 | 5 | 274 | 11 | 0 | 93 | 507 | PRDM6 |
| SE_02_044500183 | chr5:123089190-123181098 |
Sample_02_0445 | Lung | lung metastasis from primary osteosarcoma tumor M10 | 183 | 33 | 2584 | 219 | 20 | 720 | 755 | PRDM6 |
| SE_00_000400197 | chr5:123089350-123100300 |
Sample_00_0004 | Aorta | aorta | 197 | 18 | 264 | 10 | 0 | 87 | 475 | PRDM6 |
| SE_02_145201016 | chr5:123089893-123099556 |
Sample_02_1452 | Arter | pulmonary arterial smooth muscle cells_PAH2_sictrl | 1016 | 2 | 231 | 8 | 0 | 61 | 248 | PRDM6 |
| SE_02_145400368 | chr5:123090756-123157810 |
Sample_02_1454 | Arter | pulmonary arterial smooth muscle cells_PAH1_sialdh1a3 | 368 | 9 | 1859 | 157 | 13 | 453 | 199 | PRDM6 |
| SE_02_145100714 | chr5:123090798-123102120 |
Sample_02_1451 | Arter | pulmonary arterial smooth muscle cells_PAH1_sictrl | 714 | 5 | 263 | 10 | 0 | 59 | 147 | PRDM6 |
| SE_02_145500786 | chr5:123090830-123102219 |
Sample_02_1455 | Arter | pulmonary arterial smooth muscle cells_PAH2_sialdh1a3 | 786 | 3 | 267 | 10 | 0 | 59 | 147 | PRDM6 |
| SE_00_000400401 | chr5:123151402-123173498 |
Sample_00_0004 | Aorta | aorta | 401 | 6 | 656 | 58 | 5 | 166 | 172 | PRDM6 |
| SE_01_006600723 | chr5:123204091-123210777 |
Sample_01_0066 | Smooth muscle | smooth-muscle-cell | 723 | 1 | 204 | 6 | 0 | 56 | 0 | PRDM6 |
Genomic distribution of SEs associated with PRDM6