SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000105559
Gene: PLEKHA4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:48837097-48868617 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_146600007 chr19:48841826-48892805 Sample_02_1466 Blood HUDEP-2_BCL11AKO 7 6 1698 230 4 118 2714 PLEKHA4,PPP1R15A,TULP2,NUCB1,HSD17B14,DHDH,BCAT2,NUCB1-AS1
SE_02_121900460 chr19:48848875-48877774 Sample_02_1219 Bone marrow H929 460 5 1016 151 4 91 1935 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_01_010101258 chr19:48854863-48878943 Sample_01_0101 Pancreas pancreas_54y 1258 5 849 128 4 79 1662 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_104900855 chr19:48858157-48882219 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 855 14 819 122 3 85 1713 PLEKHA4,PPP1R15A,TULP2,NUCB1,HSD17B14,BCAT2,NUCB1-AS1
SE_02_061700859 chr19:48858648-48878839 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 859 3 692 104 3 78 1579 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_010000501 chr19:48858750-48881406 Sample_02_0100 Peripheral blood Macrophages_GM-CSF_72h 501 4 769 112 3 83 1638 TULP2,PLEKHA4,PPP1R15A,BCAT2,NUCB1,HSD17B14
SE_02_133200568 chr19:48858839-48876970 Sample_02_1332 Blood Monomac6_CTRL 568 2 631 95 3 75 1548 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_143100502 chr19:48858844-48877300 Sample_02_1431 Blood T cell 502 2 639 97 3 75 1548 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_125800395 chr19:48858877-48880566 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 395 6 739 111 3 75 1540 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_136700387 chr19:48858878-48876671 Sample_02_1367 Pancreas Capan1-untreated 387 2 614 93 3 75 1539 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_103400561 chr19:48858953-48876992 Sample_02_1034 Blood AML cell 561 3 627 95 3 74 1508 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_122100401 chr19:48858995-48877296 Sample_02_1221 Bone marrow KMS11 401 4 634 97 3 73 1499 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_142400306 chr19:48859024-48877007 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 306 5 625 95 3 72 1489 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_071900653 chr19:48859167-48876824 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 653 3 612 95 3 71 1451 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_01_010400297 chr19:48859406-48880575 Sample_01_0104 Lung upper lobe of left lung 297 4 726 111 3 71 1406 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_105400367 chr19:48859424-48876832 Sample_02_1054 Esophagus SKGT4 367 3 608 95 3 71 1401 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_092500624 chr19:48859671-48880846 Sample_02_0925 Heart fetal heart_PCW17_12570 624 4 725 112 3 68 1340 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_040100420 chr19:48860084-48877096 Sample_02_0401 Mammary gland SUM159PT-T47D 420 2 598 94 2 68 1306 PLEKHA4,PPP1R15A,BCAT2,TULP2,NUCB1,HSD17B14
SE_02_138100430 chr19:48860230-48876805 Sample_02_1381 Pancreas Pancreatic cancer cells_DMSO 430 6 584 94 2 68 1294 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
SE_02_023600430 chr19:48860244-48875889 Sample_02_0236 Colon V206 430 4 554 85 2 67 1235 PLEKHA4,PPP1R15A,BCAT2,TULP2,NUCB1,HSD17B14
SE_02_138200380 chr19:48860324-48876832 Sample_02_1382 Pancreas Pancreatic cancer cells_Triptolide 380 4 582 94 2 68 1270 PLEKHA4,PPP1R15A,NUCB1,TULP2,HSD17B14,BCAT2,NUCB1-AS1
Genomic distribution of SEs associated with PLEKHA4
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The strength of the tissue affected by the gene

Expression of PLEKHA4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)