SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000145287
Gene: PLAC8 Gene type: protein_coding
Strand: - External links:
Genomic region: chr4:83090048-83137075 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104900482 chr4:83021419-83163895 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 482 52 3701 167 2 98 817 PLAC8,COPS4,LIN54
SE_02_111100835 chr4:83055511-83129512 Sample_02_1111 Other HGrC1_SMAD2/3KO 835 19 1938 94 0 61 628 PLAC8,COPS4,LIN54
SE_02_011400119 chr4:83062840-83128899 Sample_02_0114 Mammary gland CAL51 119 21 1722 80 0 48 583 COPS4,PLAC8,LIN54
SE_02_104300913 chr4:83071497-83142193 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 913 28 1819 75 1 29 505 PLAC8,COPS4
SE_02_032000279 chr4:83072778-83138861 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 279 13 1703 75 1 29 505 COPS4,PLAC8
SE_02_122401042 chr4:83073068-83115253 Sample_02_1224 Bone marrow normal plasma cell 1042 9 1082 58 0 29 505 PLAC8,COPS4
SE_02_143100258 chr4:83074320-83155199 Sample_02_1431 Blood T cell 258 13 2117 88 2 34 505 PLAC8,COPS4
SE_02_046300015 chr4:83074511-83129704 Sample_02_0463 Blood OCI-AML3 cells 15 39 1455 64 0 29 505 PLAC8,COPS4
SE_02_134500106 chr4:83074861-83151704 Sample_02_1345 Leukophereses leukophereses_p358 106 22 2002 81 2 34 505 PLAC8,COPS4
SE_01_002000845 chr4:83075112-83116295 Sample_01_0020 Blood B-cell 845 11 1078 58 0 29 504 COPS4,PLAC8
SE_00_002700569 chr4:83082000-83140606 Sample_00_0027 Blood natural-killer-cell 569 8 1514 66 1 16 446 PLAC8,COPS4
SE_00_000900836 chr4:83082254-83140404 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 836 9 1498 66 1 16 446 PLAC8,COPS4
SE_02_002500496 chr4:83082538-83113967 Sample_02_0025 Blood CD19donorA 496 10 829 50 0 13 418 PLAC8,COPS4
SE_02_002400397 chr4:83082571-83113919 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 397 19 829 50 0 13 418 PLAC8,COPS4
SE_02_071600264 chr4:83088789-83126602 Sample_02_0716 Pancreas SUIT2_GFP 264 8 984 48 0 16 446 PLAC8
SE_02_134100044 chr4:83092328-83153850 Sample_02_1341 Blood MV411 44 24 1602 62 2 21 333 PLAC8
SE_01_005700458 chr4:83094626-83154311 Sample_01_0057 Pancreas duct PANC-1 458 9 1557 55 2 19 300 PLAC8
SE_02_053100395 chr4:83096081-83113939 Sample_02_0531 Mammary gland MDA-MB-231 395 3 480 24 0 10 251 PLAC8
SE_02_058800337 chr4:83098759-83129778 Sample_02_0588 Cervix HeLa Kyoto_untreated 337 6 806 28 0 13 279 PLAC8
SE_02_099300139 chr4:83099833-83129741 Sample_02_0993 Blood MOLM-13_empty 139 9 783 27 0 13 279 PLAC8
SE_02_048101178 chr4:83099915-83130743 Sample_02_0481 Mammary gland MDA-MB231 1178 6 805 26 0 13 279 PLAC8
SE_02_010400694 chr4:83100362-83129590 Sample_02_0104 Blood neutrophils 694 7 749 24 0 13 279 PLAC8
SE_02_134600096 chr4:83101731-83139073 Sample_02_1346 Leukophereses leukophereses_p400 96 6 936 33 1 13 279 PLAC8
SE_02_125800992 chr4:83101741-83117397 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 992 5 387 18 0 13 279 PLAC8
SE_02_084100026 chr4:83103568-83268884 Sample_02_0841 Blood THP-1_untr 26 48 4518 495 13 50 604 COQ2,PLAC8,LIN54,SEC31A,COPS4
SE_01_008401493 chr4:83104655-83151234 Sample_01_0084 Spleen spleen 1493 7 1195 33 2 18 279 PLAC8
SE_00_005600909 chr4:83104943-83150976 Sample_00_0056 Sigmoid colon sigmoid colon 3y 909 16 1183 32 2 15 259 PLAC8
SE_02_039700530 chr4:83105127-83116995 Sample_02_0397 Mammary gland CAL51-MCF-7 530 3 295 11 0 10 234 PLAC8
SE_02_070500086 chr4:83105309-83153728 Sample_02_0705 Pancreas AsPC1 WT 86 12 1242 39 2 15 228 PLAC8
SE_02_057400108 chr4:83106289-83129921 Sample_02_0574 Blood MOLM-13_sgNeg2 108 9 608 14 0 9 228 PLAC8
SE_02_099500151 chr4:83106308-83129572 Sample_02_0995 Blood MOLM-13_empty vector 151 16 598 13 0 9 228 PLAC8
SE_02_014400060 chr4:83106316-83154611 Sample_02_0144 Peripheral blood MV411_DMSO 60 5 1238 37 2 14 228 PLAC8
SE_02_082900286 chr4:83106474-83129790 Sample_02_0829 Lung H1703 SMARCA4-infected 286 2 591 11 0 9 228 PLAC8
SE_02_039500508 chr4:83106539-83130025 Sample_02_0395 Mammary gland BT-549 508 4 599 10 0 9 228 PLAC8
SE_02_136500372 chr4:83106575-83152598 Sample_02_1365 Pancreas AsPC1-untreated 372 12 1167 29 2 14 228 PLAC8
SE_02_034700300 chr4:83106672-83128891 Sample_02_0347 Blood AML11 300 4 567 9 0 9 228 PLAC8
SE_02_093001327 chr4:83106756-83128722 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1327 9 559 9 0 9 228 PLAC8
SE_02_012000483 chr4:83106807-83126246 Sample_02_0120 Haematopoietic and lymphoid tissue REC-1 483 3 488 8 0 9 228 PLAC8
SE_02_057500098 chr4:83107053-83129796 Sample_02_0575 Blood MOLM13_sgLKB1e2 98 9 580 10 0 9 228 PLAC8
SE_02_025600227 chr4:83107090-83140052 Sample_02_0256 Peripheral blood MV411 227 5 829 19 1 9 228 PLAC8
SE_02_061700232 chr4:83107110-83124979 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 232 3 434 7 0 9 228 PLAC8
SE_02_057800096 chr4:83107188-83129768 Sample_02_0578 Blood MOLM-13_sgSIK3e4 96 10 577 10 0 9 228 PLAC8
SE_02_078200477 chr4:83107208-83154455 Sample_02_0782 Blood MEC1 477 12 1213 34 2 14 228 PLAC8
SE_02_072400114 chr4:83107256-83152580 Sample_02_0724 Pancreatic duct AsPC1_GFP_DOX 114 8 1149 29 2 14 228 PLAC8
SE_02_103400472 chr4:83107311-83139621 Sample_02_1034 Blood AML cell 472 4 808 19 1 9 228 PLAC8
SE_02_084700259 chr4:83107322-83128632 Sample_02_0847 Mammary gland LM2-4175 259 4 544 9 0 9 228 PLAC8
SE_02_054800145 chr4:83107333-83129670 Sample_02_0548 Blood THP-1_24h with EtOH 145 9 570 10 0 9 228 PLAC8
SE_02_072000190 chr4:83107350-83129267 Sample_02_0720 Pancreas AsPC1_TP63dN_DOX 190 4 561 9 0 9 228 PLAC8
SE_02_135000488 chr4:83107381-83128837 Sample_02_1350 Leukophereses leukophereses_p456 488 7 546 9 0 9 228 PLAC8
SE_02_134000193 chr4:83107389-83115763 Sample_02_1340 Blood acute myeloid leukemia 193 2 184 4 0 9 228 PLAC8
SE_02_025500292 chr4:83107450-83129979 Sample_02_0255 Haematopoietic and lymphoid tissue MOLM13 292 3 574 10 0 9 228 PLAC8
SE_02_070600381 chr4:83107458-83126619 Sample_02_0706 Pancreas SUIT2 WT 381 4 476 8 0 9 228 PLAC8
SE_02_078300655 chr4:83107508-83154501 Sample_02_0783 Blood MEC2 655 13 1202 34 2 14 228 PLAC8
SE_02_057700217 chr4:83107509-83129773 Sample_02_0577 Blood MOLM13_empty 217 4 565 10 0 9 228 PLAC8
SE_02_015100487 chr4:83107561-83129105 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 487 2 548 9 0 9 228 PLAC8
SE_02_058400429 chr4:83107581-83116372 Sample_02_0584 Lung H1299 WT 429 1 201 4 0 9 228 PLAC8
SE_02_058200179 chr4:83107688-83129642 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 179 5 557 9 0 9 225 PLAC8
SE_02_122800837 chr4:83107696-83113932 Sample_02_1228 Mammary gland MDA-MB-231_2 837 3 148 2 0 6 197 PLAC8
SE_02_044801118 chr4:83107703-83113932 Sample_02_0448 Bone MNNG 1118 3 148 2 0 6 197 PLAC8
SE_02_046100132 chr4:83107716-83139604 Sample_02_0461 Blood MV-4-11-B cells 132 8 794 18 1 9 218 PLAC8
SE_02_058100205 chr4:83107745-83129763 Sample_02_0581 Blood MOLM13_empty_HG 205 7 554 9 0 9 216 PLAC8
SE_02_135401060 chr4:83107751-83129271 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 1060 4 546 8 0 9 215 PLAC8
SE_02_071900365 chr4:83107757-83126261 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 365 4 460 7 0 9 215 PLAC8
SE_02_075000500 chr4:83107761-83126146 Sample_02_0750 Lymphoma Rec-1_GSI 500 6 456 7 0 9 211 PLAC8
SE_00_005501205 chr4:83107775-83129470 Sample_00_0055 Spleen spleen 34y 1205 8 549 9 0 9 210 PLAC8,SEC31A,LIN54
SE_02_099400142 chr4:83107787-83129781 Sample_02_0994 Blood MOLM13_SIK3TQ 142 9 554 9 0 9 210 PLAC8
SE_02_135200609 chr4:83107806-83129520 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 609 3 550 9 0 9 207 PLAC8
SE_02_033700418 chr4:83108073-83128955 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 418 5 530 8 0 8 159 PLAC8
SE_02_134900199 chr4:83108097-83115983 Sample_02_1349 Leukophereses leukophereses_p411 199 1 173 3 0 8 158 PLAC8
SE_02_015000693 chr4:83108108-83129612 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 693 2 546 9 0 8 158 PLAC8
SE_02_045900478 chr4:83108124-83128786 Sample_02_0459 Blood ME-1_DMSO_6h 478 4 522 8 0 8 156 PLAC8
SE_02_025800510 chr4:83108126-83116324 Sample_02_0258 Lung NCI-H1299_EGFP-NEO_reporter_cells_DMSO 510 2 185 3 0 8 156 PLAC8
SE_02_134800218 chr4:83108140-83126099 Sample_02_1348 Leukophereses leukophereses_p408 218 6 446 7 0 8 156 PLAC8
SE_02_011600454 chr4:83108141-83130010 Sample_02_0116 Mammary gland MDA-MB-231_untreat 454 2 555 9 0 8 156 PLAC8
SE_02_040800605 chr4:83108166-83116743 Sample_02_0408 Kidney G401_Dox 605 1 197 3 0 8 156 PLAC8
SE_02_133200313 chr4:83108191-83129991 Sample_02_1332 Blood Monomac6_CTRL 313 7 554 9 0 8 156 PLAC8
SE_02_135100407 chr4:83108204-83129501 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 407 2 540 9 0 8 156 PLAC8
SE_02_075100395 chr4:83108232-83126086 Sample_02_0751 Lymphoma Rec-1_WO 395 5 446 7 0 8 156 PLAC8
SE_02_139300780 chr4:83108316-83115220 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 780 1 152 3 0 8 156 PLAC8
SE_02_111900512 chr4:83108342-83139606 Sample_02_1119 Blood KBM7 512 5 779 18 1 8 156 PLAC8
SE_02_153800181 chr4:83108433-83140840 Sample_02_1538 Mammary gland MDA-MB-231 181 3 799 18 1 8 156 PLAC8
SE_02_135300594 chr4:83108440-83133881 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 594 4 641 13 1 8 156 PLAC8
SE_02_070300483 chr4:83108478-83129533 Sample_02_0703 Pancreas PATU8988S WT 483 4 533 9 0 8 156 PLAC8
SE_02_084600769 chr4:83108571-83128695 Sample_02_0846 Mammary gland MDA-MB-231_untreat 769 2 509 8 0 8 156 PLAC8
SE_02_062200383 chr4:83108746-83128415 Sample_02_0622 Blood EOL1_Naive 383 7 498 8 0 4 156 PLAC8,LIN54
SE_02_131400502 chr4:83108753-83126021 Sample_02_1314 Brain hMGLs_TREM2-KO 502 5 430 7 0 4 156 PLAC8
SE_02_131300398 chr4:83108799-83151820 Sample_02_1313 Brain hMGLs_CD33_SNP 398 10 1085 26 2 9 156 PLAC8
SE_02_131500466 chr4:83108905-83153808 Sample_02_1315 Brain hMGLs_INPP5D SNP 466 12 1132 32 2 9 156 PLAC8
SE_02_022200511 chr4:83108912-83140745 Sample_02_0222 Blood DU-528 511 3 779 18 1 4 156 PLAC8
SE_02_061001439 chr4:83108923-83129765 Sample_02_0610 Liposarcoma MLS 1765-92 1439 3 519 9 0 4 156 PLAC8
SE_02_131200506 chr4:83109039-83127842 Sample_02_1312 Brain hMGLs_WT 506 5 463 8 0 4 156 PLAC8
SE_00_003601484 chr4:83109102-83154367 Sample_00_0036 Small intestine small-intestine_108days 1484 7 1150 33 2 9 156 PLAC8
SE_02_034200885 chr4:83109212-83129906 Sample_02_0342 Liver HSPCs_F0 885 6 519 9 0 4 156 PLAC8
SE_02_102800162 chr4:83109242-83129961 Sample_02_1028 Blood HL-60_WT 162 3 523 9 0 4 156 PLAC8
SE_02_050100261 chr4:83109313-83129667 Sample_02_0501 Blood HL-60_CTRL 261 7 513 9 0 4 156 PLAC8
SE_02_143000149 chr4:83109656-83115943 Sample_02_1430 Blood Kasumi-3_mock-infected 149 1 134 3 0 4 123 PLAC8
SE_02_109800660 chr4:83111689-83129723 Sample_02_1098 Blood THP1_DMSO_noPMA 660 7 454 8 0 4 28 PLAC8
SE_02_058900738 chr4:83111735-83129525 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 738 7 450 8 0 4 28 PLAC8
SE_02_059000586 chr4:83111919-83129691 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 586 6 453 8 0 4 28 PLAC8
SE_02_046400210 chr4:83111969-83128638 Sample_02_0464 Bone marrow MOLM-13 210 4 422 7 0 4 28 PLAC8
SE_02_141100244 chr4:83112302-83126208 Sample_02_1411 Colon KM12C 244 2 345 6 0 4 28 PLAC8
SE_02_141100254 chr4:83140082-83151749 Sample_02_1411 Colon KM12C 254 5 307 8 1 5 0 PLAC8
SE_02_012400595 chr4:83170333-83213849 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 595 6 1137 79 4 15 0 PLAC8
Genomic distribution of SEs associated with PLAC8
Genome Browser

The strength of the tissue affected by the gene

Expression of PLAC8

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)