Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000179715 |
| Gene: | PCED1B | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr12:47079603-47236662 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_087600514 | chr12:46768914-46791444 |
Sample_02_0876 | Muscle | SMS-CTR_CASZ1b_Ctrl | 514 | 15 | 590 | 30 | 2 | 72 | 430 | SLC38A4,PCED1B |
| SE_02_127900339 | chr12:46885759-47000019 |
Sample_02_1279 | Bone | Mesenchymal stem cells | 339 | 26 | 3230 | 251 | 9 | 85 | 0 | SLC38A4,PCED1B |
| SE_02_049100031 | chr12:46904861-47038507 |
Sample_02_0491 | Pharyng | Detroit 562-Control | 31 | 22 | 3856 | 285 | 10 | 93 | 0 | PCED1B,AMIGO2 |
| SE_02_049200048 | chr12:46904962-47038848 |
Sample_02_0492 | Pharyng | Detroit 562_LPS | 48 | 30 | 3861 | 285 | 10 | 93 | 0 | PCED1B,AMIGO2 |
| SE_02_087600077 | chr12:46905121-46984613 |
Sample_02_0876 | Muscle | SMS-CTR_CASZ1b_Ctrl | 77 | 34 | 2147 | 158 | 8 | 48 | 0 | SLC38A4,PCED1B |
| SE_02_076600080 | chr12:46908062-47000923 |
Sample_02_0766 | Ovary | PEO1 | 80 | 30 | 2623 | 191 | 9 | 48 | 0 | PCED1B |
| SE_02_076700246 | chr12:46908439-46967515 |
Sample_02_0767 | Ovary | OVCA429 | 246 | 23 | 1614 | 110 | 6 | 48 | 0 | SLC38A4,PCED1B |
| SE_02_113200455 | chr12:46908788-46966229 |
Sample_02_1132 | Pancreas | KLM1 wt | 455 | 18 | 1570 | 109 | 6 | 48 | 0 | SLC38A4,PCED1B |
| SE_02_072300171 | chr12:46933252-47022939 |
Sample_02_0723 | Pancreas | MIAPaca2 WT | 171 | 15 | 2634 | 197 | 9 | 63 | 0 | PCED1B |
| SE_02_108100307 | chr12:46933365-46966457 |
Sample_02_1081 | Muscle | CTR shCtrl | 307 | 25 | 925 | 64 | 6 | 42 | 0 | SLC38A4,PCED1B |
| SE_02_087700327 | chr12:46934413-46967433 |
Sample_02_0877 | Muscle | SMS-CTR_CASZ1b_Dox | 327 | 25 | 925 | 60 | 6 | 42 | 0 | SLC38A4,PCED1B |
| SE_02_077000108 | chr12:46935971-47038673 |
Sample_02_0770 | Ovary | OVCA429_shLuc | 108 | 44 | 3032 | 225 | 10 | 85 | 0 | PCED1B,AMIGO2 |
| SE_02_077100553 | chr12:46936396-46966703 |
Sample_02_0771 | Ovary | OVCA429_shGRHL2 | 553 | 21 | 839 | 55 | 6 | 40 | 0 | SLC38A4,PCED1B |
| SE_02_152100633 | chr12:46937674-46983565 |
Sample_02_1521 | Skin | A375 DMSO | 633 | 15 | 1260 | 91 | 8 | 40 | 0 | PCED1B |
| SE_02_127300512 | chr12:46938079-46966277 |
Sample_02_1273 | Cervix | HeLa | 512 | 6 | 791 | 54 | 6 | 40 | 0 | SLC38A4,PCED1B |
| SE_02_061000593 | chr12:46938208-46967558 |
Sample_02_0610 | Liposarcoma | MLS 1765-92 | 593 | 13 | 822 | 54 | 6 | 40 | 0 | PCED1B |
| SE_02_059000173 | chr12:46938285-46984090 |
Sample_02_0590 | Cervix | HeLa Kyoto_Luci PWWP2A siRNA | 173 | 14 | 1262 | 93 | 8 | 40 | 0 | PCED1B |
| SE_02_144900407 | chr12:46941833-46966680 |
Sample_02_1449 | Adipose | SW872_YAP_TFE3 | 407 | 8 | 718 | 46 | 6 | 40 | 0 | PCED1B |
| SE_02_077101247 | chr12:46980455-47000732 |
Sample_02_0771 | Ovary | OVCA429_shGRHL2 | 1247 | 9 | 636 | 48 | 1 | 0 | 0 | PCED1B |
| SE_02_061000612 | chr12:46982536-47024115 |
Sample_02_0610 | Liposarcoma | MLS 1765-92 | 612 | 8 | 1322 | 101 | 1 | 21 | 0 | PCED1B |
| SE_02_048100968 | chr12:46984223-47034441 |
Sample_02_0481 | Mammary gland | MDA-MB231 | 968 | 15 | 1601 | 120 | 2 | 31 | 0 | PCED1B,AMIGO2 |
| SE_02_071300570 | chr12:46998099-47039509 |
Sample_02_0713 | Pancreas | BxPC3_sgTP63 | 570 | 18 | 1261 | 97 | 1 | 46 | 0 | PCED1B,AMIGO2 |
| SE_02_087801487 | chr12:46998134-47023763 |
Sample_02_0878 | Ovary | SVOG3e cells_noDox_control | 1487 | 6 | 782 | 66 | 0 | 21 | 0 | PCED1B |
| SE_02_106700499 | chr12:47001293-47023460 |
Sample_02_1067 | Bone | SJSA-1 | 499 | 8 | 690 | 55 | 0 | 21 | 0 | PCED1B |
| SE_02_060501141 | chr12:47013668-47034886 |
Sample_02_0605 | Skin | Skin Fibroblast_DMSO | 1141 | 5 | 679 | 62 | 1 | 17 | 0 | PCED1B,AMIGO2 |
| SE_02_076600958 | chr12:47013722-47035572 |
Sample_02_0766 | Ovary | PEO1 | 958 | 10 | 699 | 63 | 1 | 20 | 0 | PCED1B,AMIGO2 |
| SE_02_072100185 | chr12:47013754-47042429 |
Sample_02_0721 | Pancreas | HPAFII_TP63dN_DOX | 185 | 9 | 893 | 71 | 1 | 34 | 0 | PCED1B,AMIGO2 |
| SE_02_071700128 | chr12:47014020-47042459 |
Sample_02_0717 | Pancreas | HPAFII_GFP_DOX | 128 | 7 | 883 | 71 | 1 | 34 | 0 | PCED1B,AMIGO2 |
| SE_02_132801244 | chr12:47014160-47024531 |
Sample_02_1328 | Non-mineralized aortic valves | aortic valve interstitial cells | 1244 | 8 | 344 | 38 | 0 | 7 | 0 | PCED1B |
| SE_02_070800219 | chr12:47017723-47041365 |
Sample_02_0708 | Pancreas | hF3 organoid | 219 | 8 | 738 | 59 | 1 | 29 | 0 | PCED1B,AMIGO2 |
| SE_02_080800078 | chr12:47030035-47107215 |
Sample_02_0808 | Ovary | RMG1_ARID1A KO | 78 | 34 | 2239 | 123 | 12 | 184 | 612 | PCED1B,AMIGO2 |
| SE_02_067200770 | chr12:47032473-47042365 |
Sample_02_0672 | Endometrium | endometrium cancer_DSG | 770 | 3 | 281 | 14 | 0 | 22 | 0 | PCED1B,AMIGO2 |
| SE_02_067400701 | chr12:47032859-47041948 |
Sample_02_0674 | Endometrium | E1_FA | 701 | 7 | 260 | 13 | 0 | 19 | 0 | PCED1B,AMIGO2 |
| SE_02_070400096 | chr12:47032933-47041883 |
Sample_02_0704 | Pancreas | HPAFII WT | 96 | 11 | 255 | 13 | 0 | 19 | 0 | PCED1B,AMIGO2 |
| SE_02_075600951 | chr12:47032946-47040876 |
Sample_02_0756 | Embryo | ES-derived progenitors_FG FOXA2 -/- | 951 | 3 | 214 | 11 | 0 | 18 | 0 | PCED1B,AMIGO2 |
| SE_02_124800514 | chr12:47032999-47040381 |
Sample_02_1248 | Bladder | RT4 | 514 | 3 | 200 | 11 | 0 | 17 | 0 | PCED1B,AMIGO2 |
| SE_02_071800470 | chr12:47032999-47040760 |
Sample_02_0718 | Pancreas | PATU8988S_GFP_DOX | 470 | 3 | 211 | 11 | 0 | 18 | 0 | PCED1B,AMIGO2 |
| SE_02_123700280 | chr12:47066099-47089105 |
Sample_02_1237 | Skin | MKL2_virus_positive | 280 | 10 | 600 | 34 | 6 | 104 | 559 | PCED1B,AMIGO2 |
| SE_02_124800081 | chr12:47068573-47090062 |
Sample_02_1248 | Bladder | RT4 | 81 | 7 | 557 | 30 | 5 | 84 | 559 | PCED1B,AMIGO2 |
Genomic distribution of SEs associated with PCED1B