SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000172057
Gene: ORMDL3 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:39921041-39927601 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_082600621 chr17:39913878-39933575 Sample_02_0826 Stomach gastric tumor 621 10 508 69 14 70 1500 ORMDL3,GSDMB,LRRC3C,GSDMA,ZPBP2,PSMD3,IKZF3
SE_00_003600795 chr17:39916520-39940416 Sample_00_0036 Small intestine small-intestine_108days 795 4 621 82 16 77 1500 GSDMB,ORMDL3,PSMD3,ZPBP2,GSDMA,LOC728129
SE_02_013200863 chr17:39919014-39940713 Sample_02_0132 Lung 1015_CL 863 2 551 73 12 76 1291 ORMDL3,GSDMB,PSMD3,GSDMA,LOC728129
SE_02_013100750 chr17:39919840-39940754 Sample_02_0131 Lung 1015_PT 750 2 522 70 11 76 1291 ORMDL3,GSDMB,PSMD3,GSDMA,LOC728129
SE_01_008200786 chr17:39919928-39930319 Sample_01_0082 Right lobe of liver right-lobe-of-liver 786 1 257 36 6 67 1291 ORMDL3,GSDMA,LOC728129,GSDMB
SE_00_004900825 chr17:39920004-39929876 Sample_00_0049 Small intestine small intestine 30y 825 2 245 33 6 65 1291 ORMDL3,GSDMA,GSDMB,LRRC3C
SE_02_032700892 chr17:39920005-39930309 Sample_02_0327 Liver hepatocytes_d6 892 1 257 34 6 67 1291 ORMDL3,GSDMA,LOC728129,GSDMB
SE_02_032600943 chr17:39920015-39930318 Sample_02_0326 Liver hepatocytes_d3 943 1 257 34 6 67 1291 ORMDL3,GSDMA,LOC728129,GSDMB
SE_02_045700765 chr17:39920654-39940185 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 765 4 496 64 11 75 1291 ORMDL3,LRRC3C,GSDMB,PSMD3,GSDMA
SE_02_074700675 chr17:39920792-39934661 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 675 6 357 45 8 71 1291 ORMDL3,LRRC3C,GSDMB,PSMD3,GSDMA
SE_02_001500597 chr17:39921855-39929300 Sample_02_0015 Liver HepG2_shNS 597 1 170 17 5 52 1072 ORMDL3,GSDMA,LOC728129,GSDMB
SE_02_049300887 chr17:39923543-39927622 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 887 2 98 13 3 27 682 ORMDL3,GSDMA,GSDMB,LRRC3C
SE_02_049500812 chr17:39923597-39927567 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 812 2 93 13 3 27 671 ORMDL3,GSDMA,GSDMB,LRRC3C
SE_02_049401136 chr17:39923722-39934393 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 1136 2 265 35 8 47 730 ORMDL3,LRRC3C,GSDMB,PSMD3,GSDMA
SE_02_004500791 chr17:39923724-39929116 Sample_02_0045 Embryo endodermal CyT49_ES_D7 791 1 124 16 4 34 730 ORMDL3,GSDMA,LOC728129,GSDMB
SE_01_004200176 chr17:39924555-39941475 Sample_01_0042 Haematopoietic and lymphoid tissue KMS-11 176 2 422 67 11 47 639 LOC728129,ORMDL3,GSDMB,PSMD3,GSDMA
SE_02_090401339 chr17:39926186-39935441 Sample_02_0904 Heart left ventricle_DCM_LV1028 1339 2 243 32 7 38 309 ORMDL3,LRRC3C,GSDMB,PSMD3,GSDMA
SE_02_093800365 chr17:39926438-39940836 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 365 2 357 52 9 42 277 ORMDL3,LRRC3C,GSDMB,PSMD3,GSDMA
SE_01_001900791 chr17:39926691-39940962 Sample_01_0019 Brain and spinal cord astrocyte 791 2 355 52 8 37 231 ORMDL3,GSDMB,PSMD3,GSDMA,LOC728129
SE_01_002900700 chr17:39926714-39940603 Sample_01_0029 Lung fibroblast-of-lung 700 2 345 46 8 37 226 ORMDL3,GSDMB,PSMD3,GSDMA,LOC728129
SE_02_093600417 chr17:39926714-39940847 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 417 2 349 49 8 37 226 ORMDL3,LRRC3C,GSDMB,PSMD3,GSDMA
SE_02_151300895 chr17:39927652-39931269 Sample_02_1513 Lung Transitional AT2->1 cells 895 1 81 16 3 17 33 LRRC3C,GSDMB,PSMD3,GSDMA,ORMDL3,GRB7,CSF3
SE_02_151400874 chr17:39927672-39930739 Sample_02_1514 Lung Differentiated AT1-like cells 874 1 71 14 3 17 29 GSDMA,GSDMB,LRRC3C,ORMDL3,GRB7,PSMD3,CSF3
SE_02_047401202 chr17:39927736-39940864 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1202 2 324 47 8 26 10 LRRC3C,GSDMB,PSMD3,GSDMA,ORMDL3
Genomic distribution of SEs associated with ORMDL3
Genome Browser

The strength of the tissue affected by the gene

Expression of ORMDL3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)