SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000110076
Gene: NRXN2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr11:64606174-64723197 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_110500575 chr11:64597758-64661385 Sample_02_1105 Brain NBL-S 575 26 1574 92 24 645 3700 NRXN2,SLC22A12,SLC22A11
SE_02_057600164 chr11:64598152-64669841 Sample_02_0576 Blood HEL_sgLKB1e2 164 21 1778 103 27 693 3988 NRXN2,SLC22A12,SLC22A11
SE_02_058000189 chr11:64598179-64649592 Sample_02_0580 Blood HEL_sgSIK3e4 189 17 1245 74 19 527 2958 NRXN2,SLC22A12,SLC22A11
SE_02_057900171 chr11:64598199-64636725 Sample_02_0579 Blood HEL_sgNeg2 171 13 961 52 13 434 2342 NRXN2,SLC22A12,SLC22A11
SE_02_045900242 chr11:64605440-64656247 Sample_02_0459 Blood ME-1_DMSO_6h 242 16 1202 63 20 596 2516 NRXN2,SLC22A11,SLC22A12
SE_02_046000337 chr11:64605516-64655968 Sample_02_0460 Blood ME-1_I-10-49_6h 337 23 1193 63 20 596 2516 NRXN2,SLC22A11,SLC22A12
SE_02_075800243 chr11:64605603-64639721 Sample_02_0758 Peripheral blood REH 243 7 791 35 12 436 1419 NRXN2,SLC22A12
SE_02_012200127 chr11:64606147-64656346 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 127 5 1187 62 19 596 2476 NRXN2,SLC22A12
SE_02_036200273 chr11:64606187-64639291 Sample_02_0362 Haematopoietic and lymphoid tissue REH 273 4 769 34 11 430 1372 NRXN2,SLC22A12
SE_02_096900023 chr11:64606928-64732359 Sample_02_0969 Brain H3.3K27M_PL637 23 28 3003 178 42 1209 4302 NRXN2,RASGRP2,SF1,SLC22A12,PYGM
SE_02_120301002 chr11:64607371-64661497 Sample_02_1203 Brain NB1 1002 18 1291 69 21 579 2448 NRXN2,SLC22A12
SE_02_120501296 chr11:64607407-64661524 Sample_02_1205 Brain NB3 1296 18 1293 69 21 577 2444 NRXN2,SLC22A12
SE_02_119500293 chr11:64607842-64695610 Sample_02_1195 Brain GBM29 293 19 2123 118 31 781 2969 NRXN2,RASGRP2,SLC22A12
SE_02_125200555 chr11:64608160-64655879 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 555 22 1136 60 18 469 1948 NRXN2,SLC22A12
SE_02_125100478 chr11:64608163-64655514 Sample_02_1251 Bone marrow RS4_11_AZD1775 _10h 478 20 1129 58 18 463 1947 NRXN2,SLC22A12
SE_02_062200424 chr11:64608765-64656197 Sample_02_0622 Blood EOL1_Naive 424 28 1136 59 18 444 1923 NRXN2,SLC22A12
SE_02_083300853 chr11:64608767-64656037 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 853 15 1132 59 18 444 1923 NRXN2,SLC22A12
SE_02_083400691 chr11:64608774-64657263 Sample_02_0834 Bone marrow TEX-HIST1H3F-WT-Rx_cells 691 18 1168 63 19 443 1923 NRXN2,SLC22A12
SE_02_083600740 chr11:64608814-64656158 Sample_02_0836 Bone marrow TEX-HIST1H3H-WT-Rx_cells 740 14 1136 59 18 443 1923 NRXN2,SLC22A12
SE_02_083500568 chr11:64609071-64656345 Sample_02_0835 Bone marrow TEX-HIST1H3H-K27M-Rx_cells 568 20 1132 58 17 443 1923 NRXN2,SLC22A12
SE_02_083700466 chr11:64609266-64657213 Sample_02_0837 Bone marrow TEX-Luciferase-Rx_cells 466 15 1155 61 18 433 1923 NRXN2,SLC22A12
SE_02_030400603 chr11:64618327-64657810 Sample_02_0304 Neuroblastoma N206 603 5 946 55 17 401 1923 NRXN2,SLC22A12
SE_02_077501569 chr11:64619017-64638575 Sample_02_0775 Pancreas EndoC-BH1_SE 1569 10 467 20 7 229 826 NRXN2,SLC22A12
SE_02_087200243 chr11:64627240-64670175 Sample_02_0872 Colon HCT116_siCtrl-5FU 243 7 1053 59 17 372 1899 NRXN2,SLC22A12
SE_02_121200485 chr11:64635226-64662190 Sample_02_1212 Brain GBM30 485 9 638 40 12 247 1449 NRXN2,SLC22A12
SE_02_123500570 chr11:64635722-64657204 Sample_02_1235 Brain Neuroblastoma PDX tumour cells 570 4 506 33 9 209 1097 NRXN2,SLC22A12
SE_02_097100665 chr11:64636603-64662193 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 665 7 617 40 12 212 1358 NRXN2,SLC22A12
SE_02_038000473 chr11:64647250-64689485 Sample_02_0380 Skeletal muscle RH18 473 5 1088 69 17 348 1475 NRXN2
SE_02_126800802 chr11:64648995-64662048 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 802 2 350 19 6 127 760 NRXN2
SE_02_153900305 chr11:64652816-64688859 Sample_02_1539 Nasopharyngeal C666-1 305 15 924 58 13 259 860 NRXN2
SE_02_096700340 chr11:64653067-64695716 Sample_02_0967 Brain H3.3K27M_JN57 340 12 1067 62 13 323 1050 NRXN2,RASGRP2
SE_02_047900848 chr11:64654209-64662244 Sample_02_0479 Head and neck SCC25 848 4 209 14 4 48 261 NRXN2
SE_02_061300762 chr11:64654473-64689041 Sample_02_0613 Liposarcoma MLPS_T1 762 9 886 58 13 233 749 NRXN2
SE_02_158400921 chr11:64656033-64662385 Sample_02_1584 Brain U87 GBM_Mock 921 4 159 10 4 30 261 NRXN2
SE_02_077501818 chr11:64658657-64702465 Sample_02_0775 Pancreas EndoC-BH1_SE 1818 10 1068 64 13 297 1026 NRXN2,RASGRP2,SLC22A12
SE_02_126200867 chr11:64659122-64662056 Sample_02_1262 Bone Im-GCT-3504_G34W 867 1 62 2 2 26 261 NRXN2
SE_02_094000031 chr11:64660123-64661360 Sample_02_0940 Brain U87 31 2 30 0 0 25 261 NRXN2
SE_02_142000367 chr11:64660192-64688832 Sample_02_1420 Brain DIPG007 367 5 724 45 10 214 737 NRXN2
SE_02_030400380 chr11:64674510-64730167 Sample_02_0304 Neuroblastoma N206 380 9 1333 84 16 540 1409 NRXN2,RASGRP2,SF1,PYGM
SE_02_029700598 chr11:64674596-64726683 Sample_02_0297 Neuroblastoma CLB-CAR 598 8 1231 78 15 507 989 NRXN2,RASGRP2,PYGM
SE_02_119600905 chr11:64674934-64695465 Sample_02_1196 Brain GBM32 905 6 512 27 5 185 390 NRXN2,RASGRP2
SE_02_007800128 chr11:64674944-64696458 Sample_02_0078 Neuroblastoma low-MYCN-Neuroblastoma-patient-cells 128 7 546 29 5 188 390 NRXN2,RASGRP2
SE_02_121300887 chr11:64674946-64716714 Sample_02_1213 Brain GBM31 887 10 1016 67 14 370 814 NRXN2,RASGRP2,PYGM
SE_02_120300636 chr11:64675039-64721832 Sample_02_1203 Brain NB1 636 11 1137 73 15 424 814 NRXN2,RASGRP2,PYGM
SE_02_110500363 chr11:64675112-64735570 Sample_02_1105 Brain NBL-S 363 23 1446 88 16 554 1595 NRXN2,RASGRP2,SF1,PYGM
SE_02_117300528 chr11:64675123-64721520 Sample_02_1173 Brain GBM01 528 15 1132 72 15 424 814 NRXN2,RASGRP2,PYGM
SE_02_121100518 chr11:64675148-64695573 Sample_02_1211 Brain GBM21 518 5 512 25 5 184 390 NRXN2,RASGRP2
SE_02_120501022 chr11:64675172-64715879 Sample_02_1205 Brain NB3 1022 15 989 63 14 341 814 NRXN2,RASGRP2,PYGM
SE_02_120400583 chr11:64675240-64721561 Sample_02_1204 Brain NB2 583 11 1129 72 15 424 814 NRXN2,RASGRP2,PYGM
SE_02_118100971 chr11:64675252-64696118 Sample_02_1181 Brain GBM10 971 4 532 27 5 184 390 NRXN2,RASGRP2
SE_02_121200709 chr11:64675355-64695958 Sample_02_1212 Brain GBM30 709 4 521 27 5 184 390 NRXN2,RASGRP2
SE_02_101300527 chr11:64675379-64701945 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 527 8 656 37 7 202 477 NRXN2,RASGRP2
SE_02_118400178 chr11:64675380-64732651 Sample_02_1184 Brain GBM13 178 19 1369 86 16 541 1459 NRXN2,RASGRP2,SF1,PYGM
SE_02_095500528 chr11:64686202-64695418 Sample_02_0955 Brain IDH1_2469 528 4 225 9 1 83 190 NRXN2,RASGRP2
Genomic distribution of SEs associated with NRXN2
Genome Browser

The strength of the tissue affected by the gene

Expression of NRXN2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)