SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000141279
Gene: NPEPPS Gene type: protein_coding
Strand: + External links:
Genomic region: chr17:47522942-47624665 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_080800156 chr17:47465944-47558671 Sample_02_0808 Ovary RMG1_ARID1A KO 156 36 2076 288 2 179 657 NPEPPS,MRPL45P2
SE_02_103600313 chr17:47467347-47567031 Sample_02_1036 Mammary gland HCC70_XY018 313 38 2202 300 2 179 657 NPEPPS,MRPL45P2
SE_02_104701040 chr17:47482189-47573081 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1040 21 2006 245 2 184 682 NPEPPS,MRPL45P2
SE_02_146500023 chr17:47490396-47561065 Sample_02_1465 Ovary CAOV4cis 23 23 1572 176 2 176 533 NPEPPS,MRPL45P2
SE_00_003100540 chr17:47491511-47533381 Sample_00_0031 Placenta placenta 540 5 886 110 2 147 427 MRPL45P2,NPEPPS
SE_00_001100251 chr17:47491568-47539658 Sample_00_0011 Esophagus esophagus 251 7 1042 133 2 151 427 MRPL45P2,NPEPPS
SE_02_008600085 chr17:47496728-47558790 Sample_02_0086 Pancreas CAPAN1 85 6 1336 146 2 153 358 NPEPPS,MRPL45P2
SE_02_076201750 chr17:47496882-47539324 Sample_02_0762 Podocyte podocyte_CTL 1750 9 881 110 2 133 310 NPEPPS,MRPL45P2
SE_02_139400042 chr17:47498138-47533419 Sample_02_1394 Lymph node anaplastic large cell lymphoma cells_ALK+#208 42 8 692 81 1 129 310 NPEPPS,MRPL45P2
SE_02_007400175 chr17:47498576-47533864 Sample_02_0074 Other 90-8TL_PDJQ 175 5 693 80 1 129 310 NPEPPS,MRPL45P2
SE_02_108800269 chr17:47498851-47533180 Sample_02_1088 Mammary gland T47D_shCtrl_45min 269 13 675 80 1 129 310 NPEPPS,MRPL45P2
SE_02_077000231 chr17:47498963-47586837 Sample_02_0770 Ovary OVCA429_shLuc 231 39 1801 195 1 230 597 NPEPPS,MRPL45P2
SE_02_076600587 chr17:47499138-47533923 Sample_02_0766 Ovary PEO1 587 11 683 79 1 126 310 NPEPPS,MRPL45P2
SE_02_045300689 chr17:47500046-47559988 Sample_02_0453 Neuroblastoma SJNB3 689 12 1291 134 1 141 358 NPEPPS,MRPL45P2
SE_02_012400074 chr17:47500450-47538276 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 74 6 769 93 1 119 310 NPEPPS,MRPL45P2
SE_02_009900014 chr17:47500555-47591227 Sample_02_0099 Foreskin Epidermal-Stem-Cells_shDNMT3B 14 24 1854 200 1 245 674 NPEPPS,MRPL45P2
SE_02_143500156 chr17:47500792-47538311 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 156 7 765 94 1 119 310 NPEPPS,MRPL45P2
SE_02_143400168 chr17:47500816-47539646 Sample_02_1434 Trophoblast trophoblast stem cells 168 6 798 98 1 120 310 NPEPPS,MRPL45P2
SE_02_136100902 chr17:47500886-47533814 Sample_02_1361 Bladder UMUC1_sonic_pSIN-puro_WTUTX 902 7 647 74 1 116 310 NPEPPS,MRPL45P2
SE_02_136200960 chr17:47500903-47534026 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 960 10 649 74 1 116 310 NPEPPS,MRPL45P2
SE_02_125300718 chr17:47500907-47561013 Sample_02_1253 Mammary gland CAMA1 ER+/FGFR1-amplified 718 27 1298 135 1 140 358 NPEPPS,MRPL45P2
SE_02_088600697 chr17:47500918-47560343 Sample_02_0886 Skin foreskin_ p63KLF4 697 11 1280 132 1 140 358 NPEPPS,MRPL45P2
SE_02_147000138 chr17:47500944-47535155 Sample_02_1470 Umbilical Vein H441 138 6 679 75 1 118 310 NPEPPS,MRPL45P2
SE_02_010700954 chr17:47500966-47534408 Sample_02_0107 Endometrium EEC16 954 4 660 75 1 116 310 NPEPPS,MRPL45P2
SE_02_146400091 chr17:47501025-47545388 Sample_02_1464 Ovary CAOV4 91 14 935 106 1 134 310 NPEPPS,MRPL45P2
SE_02_010500206 chr17:47501265-47534402 Sample_02_0105 Skin neonatal_keratinocytes 206 4 655 74 1 116 310 NPEPPS,MRPL45P2
SE_02_006300698 chr17:47501358-47534940 Sample_02_0063 Skin Keratinocytes 698 4 667 74 1 118 310 NPEPPS,MRPL45P2
SE_01_010701195 chr17:47501381-47539626 Sample_01_0107 Esophagus esophagus squamous epithelium 1195 11 787 96 1 120 310 NPEPPS,MRPL45P2
SE_01_007500803 chr17:47501402-47533844 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 803 4 637 73 1 116 310 NPEPPS,MRPL45P2
SE_03_000300067 chr17:47501408-47534160 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 67 5 643 73 1 116 310 NPEPPS,MRPL45P2
SE_02_009700036 chr17:47501422-47565281 Sample_02_0097 Foreskin Epidermal-Stem-Cells_shCTRL 36 14 1367 145 1 140 358 NPEPPS,MRPL45P2
SE_02_040400153 chr17:47501549-47562707 Sample_02_0404 Mammary gland ZR-75-1_2 153 11 1311 136 1 140 358 NPEPPS,MRPL45P2
SE_02_005701113 chr17:47501679-47534679 Sample_02_0057 Mammary gland vHMEC 1113 4 651 74 1 117 310 NPEPPS,MRPL45P2
SE_02_082600813 chr17:47501997-47572335 Sample_02_0826 Stomach gastric tumor 813 21 1487 158 1 139 383 NPEPPS,MRPL45P2
SE_02_016800432 chr17:47518070-47558549 Sample_02_0168 Prostate LNCaP 432 6 890 88 1 98 358 NPEPPS,MRPL45P2
SE_02_108900365 chr17:47519657-47533284 Sample_02_1089 Mammary gland T47D_shCtrl_shRING1B_45min 365 5 266 28 1 72 310 NPEPPS,MRPL45P2
SE_02_017700597 chr17:47519675-47558334 Sample_02_0177 Urinary bladder J82 597 5 856 84 1 96 358 NPEPPS,MRPL45P2
SE_02_015000296 chr17:47519837-47569817 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 296 5 1089 106 1 98 383 NPEPPS,MRPL45P2
SE_02_103501090 chr17:47528038-47537712 Sample_02_1035 Mammary gland HCC70_Vehicle 1090 3 202 27 1 57 269 NPEPPS,MRPL45P2
SE_02_010600557 chr17:47530024-47533153 Sample_02_0106 Skin NHEK_M 557 1 62 9 1 55 269 NPEPPS,MRPL45P2
SE_02_029400210 chr17:47530111-47590112 Sample_02_0294 Pancreatic L3-6_DMSO 210 8 1254 131 1 176 596 NPEPPS,MRPL45P2
SE_01_003300169 chr17:47530219-47560161 Sample_01_0033 Embryo H9 169 3 705 65 0 79 317 NPEPPS,MRPL45P2
SE_01_003701079 chr17:47530221-47541276 Sample_01_0037 Liver hepatocyte 1079 2 261 31 0 71 269 NPEPPS,MRPL45P2
SE_02_028000447 chr17:47530389-47577641 Sample_02_0280 Mammary gland SUM159_DMSO_24h 447 9 1041 103 0 99 368 NPEPPS,MRPL45P2
SE_02_127800067 chr17:47530454-47627411 Sample_02_1278 Chordoma UCH1_DMSO_48h 67 22 2010 212 3 296 1426 NPEPPS,MRPL45P2,KPNB1
SE_02_003801576 chr17:47530528-47540632 Sample_02_0038 Embryo DE 1576 2 245 30 0 61 269 NPEPPS,MRPL45P2
SE_02_004001164 chr17:47530530-47534790 Sample_02_0040 Embryo PFG 1164 2 97 7 0 56 269 NPEPPS,MRPL45P2
SE_02_003901107 chr17:47530531-47534789 Sample_02_0039 Embryo AFG 1107 1 97 7 0 56 269 NPEPPS,MRPL45P2
SE_02_004800721 chr17:47531148-47562715 Sample_02_0048 Embryo endodermal CyT49_HE 721 6 738 67 0 69 237 NPEPPS,MRPL45P2
SE_02_023300573 chr17:47531770-47581710 Sample_02_0233 Tonsil Th1 573 10 1081 110 0 81 144 NPEPPS,MRPL45P2
SE_02_151000219 chr17:47533190-47622952 Sample_02_1510 Lung H3122_LR_Pano 219 36 1827 185 2 233 1130 NPEPPS,MRPL45P2,KPNB1
Genomic distribution of SEs associated with NPEPPS
Genome Browser

The strength of the tissue affected by the gene

Expression of NPEPPS

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)