SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000059728
Gene: MXD1 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:69897688-69942945 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122400509 chr2:69889661-69947935 Sample_02_1224 Bone marrow normal plasma cell 509 23 1434 148 3 129 1656 MXD1,SNRNP27,ASPRV1
SE_02_103601113 chr2:69899468-69950786 Sample_02_1036 Mammary gland HCC70_XY018 1113 13 1291 128 2 106 1450 MXD1,SNRNP27,ASPRV1
SE_02_146000134 chr2:69899599-69954893 Sample_02_1460 Blood Mutz-3 134 14 1399 138 2 107 1450 MXD1,SNRNP27,ASPRV1
SE_02_143100302 chr2:69899838-69948957 Sample_02_1431 Blood T cell 302 8 1225 121 2 106 1450 MXD1,SNRNP27,ASPRV1
SE_01_002400477 chr2:69900154-69953375 Sample_01_0024 Blood CD14-positive-monocyte 477 6 1339 129 2 107 1450 SNRNP27,MXD1,ASPRV1
SE_01_008400980 chr2:69900497-69957272 Sample_01_0084 Spleen spleen 980 8 1448 141 3 117 1450 SNRNP27,MXD1,ASPRV1
SE_01_005200014 chr2:69900658-69958145 Sample_01_0052 Blood neutrophil 14 4 1477 147 3 117 1450 SNRNP27,MXD1,ASPRV1
SE_02_135000537 chr2:69900845-69947379 Sample_02_1350 Leukophereses leukophereses_p456 537 14 1143 111 2 105 1450 MXD1,SNRNP27,ASPRV1
SE_02_061701106 chr2:69901011-69918703 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 1106 3 398 39 0 46 382 MXD1,SNRNP27,ASPRV1
SE_02_134500206 chr2:69901015-69950403 Sample_02_1345 Leukophereses leukophereses_p358 206 18 1245 125 2 105 1450 MXD1,SNRNP27,ASPRV1
SE_02_045900471 chr2:69901141-69948119 Sample_02_0459 Blood ME-1_DMSO_6h 471 9 1160 116 2 105 1450 MXD1,SNRNP27,ASPRV1
SE_02_057500626 chr2:69901324-69953311 Sample_02_0575 Blood MOLM13_sgLKB1e2 626 13 1305 128 2 106 1450 MXD1,SNRNP27,ASPRV1
SE_01_008501212 chr2:69901356-69948408 Sample_01_0085 Stomach stomach 1212 5 1163 116 2 105 1450 SNRNP27,MXD1,ASPRV1
SE_02_046000207 chr2:69901548-69956408 Sample_02_0460 Blood ME-1_I-10-49_6h 207 17 1391 140 3 112 1450 MXD1,SNRNP27,ASPRV1
SE_02_008100313 chr2:69901748-69948861 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 313 6 1167 116 2 104 1450 SNRNP27,MXD1,ASPRV1
SE_01_010400396 chr2:69901909-69949000 Sample_01_0104 Lung upper lobe of left lung 396 11 1174 117 2 104 1450 MXD1,SNRNP27,ASPRV1
SE_02_010000352 chr2:69902238-69947845 Sample_02_0100 Peripheral blood Macrophages_GM-CSF_72h 352 6 1122 111 2 104 1450 SNRNP27,MXD1,ASPRV1
SE_02_108300553 chr2:69902338-69949003 Sample_02_1083 Macula macula 553 11 1163 117 2 104 1450 MXD1,SNRNP27,ASPRV1
SE_02_108200503 chr2:69902383-69949048 Sample_02_1082 Retina retina 503 14 1165 117 2 104 1450 MXD1,SNRNP27,ASPRV1
SE_02_122900748 chr2:69909508-69950350 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 748 16 1055 106 2 97 1313 MXD1,ASPRV1,SNRNP27
SE_02_092800127 chr2:69910607-69940098 Sample_02_0928 Peripheral blood neutrophils_Ecoli 127 1 717 68 1 77 1032 MXD1,ASPRV1,SNRNP27,ANXA4,TGFA,PCBP1,GMCL1
SE_02_129900383 chr2:69910644-69952938 Sample_02_1299 Liver liver 383 17 1089 105 2 98 1313 MXD1,ASPRV1,SNRNP27
SE_02_033600716 chr2:69911265-69948758 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 716 4 960 91 2 97 1313 MXD1,SNRNP27,ASPRV1
SE_02_097900857 chr2:69911275-69934889 Sample_02_0979 Brain JN14-BS1_H3.3K27M 857 6 544 54 1 51 599 MXD1,ASPRV1,SNRNP27
SE_02_096701077 chr2:69911421-69918347 Sample_02_0967 Brain H3.3K27M_JN57 1077 4 159 11 0 38 245 MXD1,ASPRV1,SNRNP27
SE_02_157300910 chr2:69911825-69947344 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 910 9 895 84 2 97 1313 MXD1,ASPRV1,SNRNP27
SE_02_071200292 chr2:69912205-69948659 Sample_02_0712 Pancreas BxPC3_sgNEG 292 7 931 88 2 97 1313 MXD1,ASPRV1,SNRNP27
SE_02_103300416 chr2:69912238-69957156 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 416 11 1179 112 3 108 1313 MXD1,ASPRV1,SNRNP27
SE_02_071300465 chr2:69912305-69950629 Sample_02_0713 Pancreas BxPC3_sgTP63 465 10 997 96 2 97 1313 MXD1,ASPRV1,SNRNP27
SE_02_092700575 chr2:69912338-69920140 Sample_02_0927 Peripheral blood neutrophils_US 575 1 186 14 0 41 245 MXD1,ASPRV1,SNRNP27,TGFA,GMCL1
SE_02_061900499 chr2:69912661-69949628 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 499 13 963 92 2 96 1313 MXD1,ASPRV1,SNRNP27
SE_02_143701307 chr2:69913015-69946575 Sample_02_1437 Liver LSEC-TNF 1307 10 850 76 2 96 1313 MXD1,ASPRV1,SNRNP27
SE_02_010300185 chr2:69914883-69955314 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 185 8 1058 104 2 89 1303 MXD1,SNRNP27,ASPRV1
SE_02_010200394 chr2:69914885-69948385 Sample_02_0102 Peripheral blood Macrophages_GM-CSF_72h_IL4 394 3 861 84 2 85 1303 MXD1,SNRNP27,ASPRV1
SE_02_153000087 chr2:69914916-69958836 Sample_02_1530 Peripheral blood neutrophils_0BA0X 87 1 1171 114 3 95 1298 MXD1,ASPRV1,SNRNP27,ANXA4,TGFA,PCBP1,GMCL1
SE_01_002700383 chr2:69915002-69948177 Sample_01_0027 Prostate epithelial-cell-of-prostate 383 4 851 83 2 79 1273 MXD1,SNRNP27,ASPRV1
SE_02_153200278 chr2:69915013-69948609 Sample_02_1532 Mammary gland MCF10A 278 7 869 84 2 77 1270 MXD1,ASPRV1,SNRNP27
SE_02_066000576 chr2:69915059-69948801 Sample_02_0660 Mammary gland MCF10DCIS 576 6 872 84 2 76 1254 MXD1,ASPRV1,SNRNP27
SE_02_102100296 chr2:69915115-69948275 Sample_02_1021 Mammary gland SUM159R 296 6 854 84 2 74 1247 MXD1,ASPRV1,SNRNP27
SE_02_072100246 chr2:69915131-69948586 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 246 10 863 84 2 74 1244 MXD1,ASPRV1,SNRNP27
SE_02_070700253 chr2:69915530-69948578 Sample_02_0707 Pancreas BxPC3 WT 253 7 854 84 2 70 1126 MXD1,ASPRV1,SNRNP27
SE_02_071000532 chr2:69915579-69947852 Sample_02_0710 Pancreas hN34_organoid 532 8 824 80 2 70 1111 MXD1,ASPRV1,SNRNP27
SE_02_151600758 chr2:69915907-69946512 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 758 5 777 71 2 70 1109 MXD1,ASPRV1,SNRNP27
SE_02_151500564 chr2:69915966-69947923 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 564 6 821 81 2 70 1105 MXD1,ASPRV1,SNRNP27
SE_02_117500390 chr2:69916837-69953190 Sample_02_1175 Brain GBM03 390 14 962 96 2 65 1068 MXD1,ASPRV1,SNRNP27
SE_00_005500662 chr2:69916849-69956092 Sample_00_0055 Spleen spleen 34y 662 9 1047 108 3 72 1068 MXD1,ASPRV1,SNRNP27,PCBP1,GMCL1
SE_02_034200939 chr2:69916891-69955075 Sample_02_0342 Liver HSPCs_F0 939 8 1012 103 2 65 1068 MXD1,SNRNP27,ASPRV1
SE_02_125400363 chr2:69917164-69948839 Sample_02_1254 Bladder Bladder tumor Basal1 363 8 829 85 2 64 1068 MXD1,ASPRV1,SNRNP27
SE_02_009700788 chr2:69917212-69946452 Sample_02_0097 Foreskin Epidermal-Stem-Cells_shCTRL 788 4 742 68 2 59 1068 MXD1,SNRNP27,ASPRV1
SE_02_064801177 chr2:69917277-69947580 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 1177 9 780 78 2 62 1068 MXD1,ASPRV1,SNRNP27
SE_02_064700890 chr2:69917484-69947851 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 890 8 788 78 2 59 1068 MXD1,ASPRV1,SNRNP27
SE_02_065201187 chr2:69918078-69947501 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1187 7 760 76 2 59 1068 MXD1,ASPRV1,SNRNP27
SE_02_071700709 chr2:69931821-69948743 Sample_02_0717 Pancreas HPAFII_GFP_DOX 709 5 476 44 1 46 876 MXD1,ASPRV1,SNRNP27
SE_02_039601908 chr2:69931829-70010985 Sample_02_0396 Skin NHEK-D 1908 15 2291 164 4 136 1797 ASPRV1,LOC400960,MXD1,SNRNP27
SE_02_134900255 chr2:69931864-69947815 Sample_02_1349 Leukophereses leukophereses_p411 255 5 443 40 1 46 871 MXD1,ASPRV1,SNRNP27
SE_02_093801035 chr2:69931900-69947132 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 1035 3 420 37 1 46 866 MXD1,ASPRV1,SNRNP27
SE_02_156801226 chr2:69931910-69946687 Sample_02_1568 Heart Cardiac progenitor cells 1226 6 404 32 1 46 862 MXD1,ASPRV1,SNRNP27
SE_01_004100942 chr2:69933095-69947824 Sample_01_0041 Skin keratinocyte 942 2 422 40 1 46 719 MXD1,SNRNP27,ASPRV1
SE_02_123200480 chr2:69933410-69949172 Sample_02_1232 Lung PC9_siMED13L-2 480 4 465 46 1 46 714 MXD1,ASPRV1,SNRNP27
SE_02_123000593 chr2:69933600-69949027 Sample_02_1230 Lung PC9 593 4 457 44 1 46 714 MXD1,ASPRV1,SNRNP27
SE_02_123300490 chr2:69933711-69949052 Sample_02_1233 Lung PC9_miR-4497 mimic 490 3 458 44 1 46 714 MXD1,ASPRV1,SNRNP27
SE_02_065700635 chr2:69934142-69946982 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 635 5 368 31 1 46 714 MXD1,ASPRV1,SNRNP27
SE_02_123000603 chr2:69965694-69999594 Sample_02_1230 Lung PC9 603 7 991 52 1 28 108 PCBP1-AS1,ASPRV1,MXD1
SE_02_123300619 chr2:69966674-69999601 Sample_02_1233 Lung PC9_miR-4497 mimic 619 8 965 52 1 23 108 PCBP1-AS1,ASPRV1,MXD1
SE_02_061900676 chr2:69987788-70013250 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 676 9 737 40 0 0 108 PCBP1-AS1,ASPRV1,MXD1
Genomic distribution of SEs associated with MXD1
Genome Browser

The strength of the tissue affected by the gene

Expression of MXD1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)