SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000096080
Gene: MRPS18A Gene type: protein_coding
Strand: - External links:
Genomic region: chr6:43671202-43687791 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_019400358 chr6:43664706-43674299 Sample_02_0194 Kidney Patient_x750T 358 1 291 21 1 36 375 RSPH9,MRPS18A,MAD2L1BP,GTPBP2
SE_02_129900426 chr6:43665003-43685331 Sample_02_1299 Liver liver 426 7 585 52 1 139 757 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_093500670 chr6:43665699-43680911 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 670 8 444 36 1 84 690 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_081800487 chr6:43666013-43675213 Sample_02_0818 Ovary High-grade serous ovarian cancer 487 1 289 23 1 36 410 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_074300356 chr6:43666032-43718786 Sample_02_0743 Embryo ES derived mesoderm_day2 356 18 1480 127 4 250 854 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_119701017 chr6:43666038-43684617 Sample_02_1197 Brain GBM33 1017 11 538 47 1 138 757 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_121200329 chr6:43666110-43695707 Sample_02_1212 Brain GBM30 329 10 830 81 2 172 854 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_097100379 chr6:43666257-43725437 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 379 13 1684 140 4 284 846 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_093700541 chr6:43666366-43685068 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 541 6 542 49 1 139 719 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_129700134 chr6:43666369-43745118 Sample_02_1297 Lung lung 134 24 2230 178 7 372 816 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_036700209 chr6:43666615-43703557 Sample_02_0367 Skeletal muscle NS129 209 5 1026 102 2 195 779 RSPH9,MRPS18A,MAD2L1BP,GTPBP2
SE_02_095800209 chr6:43666756-43725335 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 209 13 1665 138 4 272 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_01_007600616 chr6:43666761-43719731 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 616 6 1486 126 4 251 758 RSPH9,MRPS18A,MAD2L1BP,GTPBP2
SE_01_009700223 chr6:43666880-43718485 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 223 8 1450 125 4 243 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_036800288 chr6:43666884-43703605 Sample_02_0368 Skeletal muscle NS134 288 5 1018 102 2 195 758 RSPH9,MRPS18A,MAD2L1BP,GTPBP2
SE_02_124800373 chr6:43666930-43672502 Sample_02_1248 Bladder RT4 373 1 181 16 1 28 279 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_117900577 chr6:43667055-43688469 Sample_02_1179 Brain GBM08 577 8 613 56 1 156 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_021100196 chr6:43667180-43719082 Sample_02_0211 Lung MRC-5_NFD_1DPT 196 9 1453 126 4 250 758 RSPH9,MRPS18A,MAD2L1BP,GTPBP2
SE_02_081700189 chr6:43667288-43726166 Sample_02_0817 Ovary Epithelial ovarian cancer 189 14 1679 142 4 293 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_110700134 chr6:43667313-43726242 Sample_02_1107 Brain SK-N-AS 134 23 1682 142 4 293 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_01_009400534 chr6:43667399-43718654 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 534 9 1442 125 4 245 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_089200658 chr6:43667421-43720056 Sample_02_0892 Heart left ventricle_LV1215 658 16 1482 126 4 251 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_088900770 chr6:43667429-43720438 Sample_02_0889 Heart left ventricle_LV1183 770 18 1495 126 4 251 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_075300037 chr6:43667433-43720869 Sample_02_0753 Embryo ES-derived progenitors_FG type 37 13 1514 128 4 251 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_122400202 chr6:43667451-43725838 Sample_02_1224 Bone marrow normal plasma cell 202 24 1668 140 4 290 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_091000799 chr6:43667453-43720143 Sample_02_0910 Heart left ventricle_DCM_LV1275 799 19 1485 126 4 250 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_110600454 chr6:43667472-43741421 Sample_02_1106 Brain NGP 454 36 2081 160 7 350 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_090400797 chr6:43667474-43720226 Sample_02_0904 Heart left ventricle_DCM_LV1028 797 20 1487 126 4 250 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_033000598 chr6:43667503-43714731 Sample_02_0330 Endoderm MHG 598 10 1304 117 3 207 758 RSPH9,MRPS18A,MAD2L1BP,GTPBP2
SE_02_089600709 chr6:43667504-43720414 Sample_02_0896 Heart left ventricle_LV1294 709 20 1491 125 4 250 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_088700486 chr6:43667517-43720297 Sample_02_0887 Heart left ventricle_LV1121 486 14 1486 125 4 250 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_090600556 chr6:43667520-43719700 Sample_02_0906 Heart left ventricle_DCM_LV1072 556 17 1463 125 4 250 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_090700873 chr6:43667522-43719878 Sample_02_0907 Heart left ventricle_DCM_LV1223 873 14 1473 125 4 250 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_090301133 chr6:43667563-43719456 Sample_02_0903 Heart left ventricle_DCM_LV1009 1133 16 1455 125 4 249 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_004000605 chr6:43667586-43714654 Sample_02_0040 Embryo PFG 605 7 1300 116 3 207 758 RSPH9,MRPS18A,MAD2L1BP,GTPBP2
SE_02_075600261 chr6:43667601-43720584 Sample_02_0756 Embryo ES-derived progenitors_FG FOXA2 -/- 261 12 1495 125 4 250 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_090200869 chr6:43667606-43720072 Sample_02_0902 Heart left ventricle_LV1558 869 15 1476 125 4 250 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_090000393 chr6:43667606-43720274 Sample_02_0900 Heart left ventricle_LV1452 393 20 1484 125 4 250 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_089000338 chr6:43667639-43720044 Sample_02_0890 Heart left ventricle_LV1200 338 13 1476 125 4 250 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_092000491 chr6:43667669-43719709 Sample_02_0920 Heart left ventricle_DCM_LV1535 491 18 1458 125 4 250 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_097300383 chr6:43667814-43688565 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 383 4 600 55 1 155 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_091500783 chr6:43667907-43719552 Sample_02_0915 Heart left ventricle_DCM_LV1371 783 15 1446 125 4 249 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_091201093 chr6:43667918-43719652 Sample_02_0912 Heart left ventricle_DCM_LV1300 1093 15 1449 125 4 249 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_00_005600671 chr6:43668267-43733584 Sample_00_0056 Sigmoid colon sigmoid colon 3y 671 28 1862 152 6 309 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_090801083 chr6:43668320-43719693 Sample_02_0908 Heart left ventricle_DCM_LV1262 1083 18 1442 125 4 249 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_089900338 chr6:43668435-43720067 Sample_02_0899 Heart left ventricle_LV1400 338 20 1449 124 4 250 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_091800711 chr6:43668465-43719651 Sample_02_0918 Heart left ventricle_DCM_LV1437 711 12 1427 124 4 249 758 RSPH9,MRPS18A,GTPBP2,MAD2L1BP
SE_02_091400396 chr6:43668713-43720288 Sample_02_0914 Heart left ventricle_DCM_LV1342 396 19 1448 124 4 250 758 RSPH9,MRPS18A,VEGFA,MAD2L1BP,GTPBP2
SE_02_116500047 chr6:43673208-43680097 Sample_02_1165 Testis round spermatids 47 5 183 18 0 44 315 MRPS18A,RSPH9,GTPBP2,MAD2L1BP
SE_02_004300495 chr6:43682578-43708096 Sample_02_0043 Embryo endodermal CyT49_ES_D2 495 7 661 61 1 106 97 MRPS18A,MAD2L1BP,RSPH9
SE_00_004100509 chr6:43686409-43710176 Sample_00_0041 Stomach stomach_3y 509 6 614 58 1 61 97 MRPS18A,RSPH9
SE_02_004900551 chr6:43686959-43719559 Sample_02_0049 Embryo endodermal CyT49_GTtoH 551 6 891 72 3 107 97 MRPS18A,RSPH9
SE_00_002500702 chr6:43687027-43718730 Sample_00_0025 Muscle of leg muscle-of-leg 702 9 870 71 3 105 97 MRPS18A,RSPH9
SE_00_000301532 chr6:43687029-43715635 Sample_00_0003 Adrenal gland adrenal-gland_97d 1532 6 769 66 3 79 97 MRPS18A,RSPH9
SE_00_004200482 chr6:43687054-43710153 Sample_00_0042 Stomach stomach_30y 482 10 594 55 1 60 97 MRPS18A,RSPH9
SE_00_002600844 chr6:43687066-43718700 Sample_00_0026 Muscle of trunk muscle-of-trunk 844 7 869 71 3 103 97 MRPS18A,RSPH9
SE_02_004600540 chr6:43687147-43714795 Sample_02_0046 Embryo endodermal CyT49_ES_D10 540 5 738 64 2 65 97 MRPS18A,RSPH9
SE_02_004800449 chr6:43687173-43719606 Sample_02_0048 Embryo endodermal CyT49_HE 449 9 889 72 3 106 97 MRPS18A,RSPH9
SE_00_001200628 chr6:43687878-43703951 Sample_00_0012 Embryo H1-hESC 628 4 412 48 1 39 12 MRPS18A,RSPH9
SE_02_077502327 chr6:43690103-43721115 Sample_02_0775 Pancreas EndoC-BH1_SE 2327 13 874 66 2 95 0 VEGFA,MRPS18A,RSPH9
SE_02_081900475 chr6:43693955-43710489 Sample_02_0819 Ovary Mucinous ovarian cancer 475 4 425 36 0 45 0 MRPS18A,RSPH9
SE_02_125500155 chr6:43693960-43704790 Sample_02_1255 Bladder Bladder tumor Luminal2 155 4 288 29 0 37 0 MRPS18A,RSPH9
SE_01_008500891 chr6:43694166-43726210 Sample_01_0085 Stomach stomach 891 4 926 66 2 135 0 VEGFA,RSPH9,MRPS18A
SE_02_031000296 chr6:43694174-43718271 Sample_02_0310 Neuroblastoma SJNB8 296 3 672 48 2 85 0 MRPS18A,RSPH9
SE_02_084000468 chr6:43694412-43722807 Sample_02_0840 Embryo hNPCs_R1159Q/+ 468 10 802 56 2 94 0 VEGFA,RSPH9,MRPS18A
SE_02_025700392 chr6:43694521-43735673 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 392 5 1183 79 4 169 0 VEGFA,RSPH9,MRPS18A
SE_02_068700323 chr6:43694550-43710068 Sample_02_0687 Lung NCI-H146_no infection 323 7 398 33 0 45 0 MRPS18A,RSPH9
SE_02_021000380 chr6:43694579-43719197 Sample_02_0210 Lung MRC-5_N_1DPT 380 8 688 50 2 92 0 MRPS18A,RSPH9
SE_02_029400472 chr6:43694905-43741812 Sample_02_0294 Pancreatic L3-6_DMSO 472 6 1319 83 5 193 0 VEGFA,RSPH9,MRPS18A
SE_02_105800949 chr6:43694978-43726023 Sample_02_1058 Bone A673_SA2 Rescue 949 16 897 62 2 133 0 VEGFA,RSPH9,MRPS18A
SE_02_049401339 chr6:43695056-43705686 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 1339 6 271 26 0 37 0 MRPS18A
SE_00_005800592 chr6:43695104-43705621 Sample_00_0058 Stomach stomach 34y 592 6 271 26 0 37 0 MRPS18A
SE_02_068000224 chr6:43695104-43716498 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 224 9 588 44 2 76 0 MRPS18A
SE_02_055900578 chr6:43695147-43718722 Sample_02_0559 iPSCs FX52 iPSCs dC-T 578 7 662 47 2 89 0 MRPS18A
SE_02_067900313 chr6:43695257-43714470 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 313 10 514 39 1 48 0 MRPS18A
SE_02_102700512 chr6:43695367-43743289 Sample_02_1027 Esophagus KYSE180_1 512 13 1350 87 5 192 0 VEGFA,MRPS18A
SE_02_049500901 chr6:43695425-43705656 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 901 5 261 25 0 35 0 MRPS18A
SE_02_123000920 chr6:43695523-43709369 Sample_02_1230 Lung PC9 920 6 361 29 0 34 0 MRPS18A
SE_02_106100398 chr6:43695592-43727115 Sample_02_1061 Bone TC71_WT 398 9 915 64 3 124 0 VEGFA,MRPS18A
SE_02_148800396 chr6:43695592-43727115 Sample_02_1488 Bone TC-71 396 8 915 64 3 124 0 VEGFA,MRPS18A
SE_02_020700339 chr6:43695711-43719963 Sample_02_0207 Stomach FU97 339 7 684 46 2 79 0 MRPS18A
SE_02_082700234 chr6:43695857-43724643 Sample_02_0827 Stomach normal gastric 234 6 825 58 2 85 0 VEGFA,MRPS18A
SE_02_019400169 chr6:43697882-43738555 Sample_02_0194 Kidney Patient_x750T 169 6 1169 74 5 157 0 VEGFA,MRPS18A
SE_02_130800691 chr6:43698165-43709852 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 691 4 298 21 0 27 0 MRPS18A
SE_02_154900550 chr6:43698463-43710111 Sample_02_1549 Gastrointestinal Stromal GIST-430B 550 5 291 20 0 27 0 MRPS18A
SE_02_046501120 chr6:43698553-43747545 Sample_02_0465 Adipose subcutaneous adipocytes 1120 14 1408 94 5 215 0 VEGFA,MRPS18A
SE_02_129600270 chr6:43699209-43746590 Sample_02_1296 Perigastric lymph node Perigastric lymph node 270 20 1366 91 5 203 0 VEGFA,MRPS18A
SE_02_098800489 chr6:43699230-43737856 Sample_02_0988 Blood K562_EPZ 489 12 1118 69 5 156 0 VEGFA,MRPS18A
SE_02_112900784 chr6:43699301-43724806 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 784 14 743 47 2 81 0 VEGFA,MRPS18A
SE_02_138400591 chr6:43699345-43747259 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 591 10 1384 91 5 214 0 VEGFA,MRPS18A
SE_02_072900303 chr6:43699473-43726063 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 303 11 783 49 2 116 0 VEGFA,MRPS18A
SE_02_148300748 chr6:43699491-43725835 Sample_02_1483 Bone RD-ES 748 12 775 49 2 114 0 VEGFA,MRPS18A
SE_02_072800452 chr6:43699847-43725208 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 452 11 737 46 2 79 0 VEGFA,MRPS18A
SE_02_082601236 chr6:43701083-43726695 Sample_02_0826 Stomach gastric tumor 1236 15 743 43 2 108 0 VEGFA,MRPS18A
SE_02_157300934 chr6:43701449-43737930 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 934 17 1052 60 5 147 0 VEGFA,MRPS18A
SE_02_073200531 chr6:43701484-43725070 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 531 8 679 38 2 72 0 VEGFA,MRPS18A
SE_02_073300524 chr6:43702106-43726068 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 524 10 707 38 2 107 0 VEGFA,MRPS18A
SE_02_075100556 chr6:43702129-43725993 Sample_02_0751 Lymphoma Rec-1_WO 556 10 706 38 2 105 0 VEGFA,MRPS18A
SE_02_073100495 chr6:43702261-43725160 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 495 5 667 36 2 73 0 VEGFA,MRPS18A
SE_02_075000591 chr6:43702263-43726271 Sample_02_0750 Lymphoma Rec-1_GSI 591 10 711 40 2 107 0 VEGFA,MRPS18A
SE_02_073600549 chr6:43702291-43716517 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 549 8 395 20 2 49 0 MRPS18A
SE_02_122700718 chr6:43702304-43734701 Sample_02_1227 Bone marrow U266 718 5 946 53 4 140 0 VEGFA,MRPS18A
SE_02_115600243 chr6:43703027-43726432 Sample_02_1156 Peripheral blood Day6 Plasmablast CD23- memory B cell 243 10 693 40 2 102 0 VEGFA,MRPS18A
SE_02_073000465 chr6:43703054-43725062 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 465 5 643 36 2 66 0 VEGFA,MRPS18A
SE_02_115700355 chr6:43703095-43726184 Sample_02_1157 Peripheral blood Day6 Plasmablast CD23- memory B cell_G9A-Inhibited 355 14 685 40 2 101 0 VEGFA,MRPS18A
Genomic distribution of SEs associated with MRPS18A
Genome Browser

The strength of the tissue affected by the gene

Expression of MRPS18A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)