SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000283419
Gene: MIR6874 Gene type: miRNA
Strand: - External links:
Genomic region: chr7:5711840-5711910 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_113100446 chr7:5628869-5677991 Sample_02_1131 Pancreas T3M4 wt 446 12 1711 149 3 54 272 RNF216,RNF216-IT1,FSCN1,MIR6874
SE_02_112900589 chr7:5688137-5709643 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 589 7 685 39 0 60 362 RNF216,RNF216-IT1,MIR6874
SE_02_049900820 chr7:5688282-5704410 Sample_02_0499 Fetal lung IMR90 IR Senescence 820 8 510 25 0 59 359 RNF216,RNF216-IT1,MIR6874
SE_02_089400529 chr7:5688863-5703619 Sample_02_0894 Heart left ventricle_LV1248 529 5 474 22 0 53 327 RNF216,RNF216-IT1,MIR6874
SE_02_147200531 chr7:5688884-5703510 Sample_02_1472 Fetal lung IMR-90 531 5 471 22 0 53 327 RNF216,RNF216-IT1,MIR6874
SE_00_005700506 chr7:5689085-5703494 Sample_00_0057 Heart right ventricle 3y 506 22 463 22 0 53 313 RNF216,RNF216-IT1,MIR6874
SE_02_105400849 chr7:5690703-5703936 Sample_02_1054 Esophagus SKGT4 849 2 415 20 0 53 93 RNF216,RNF216-IT1,MIR6874
SE_02_121200433 chr7:5690800-5705053 Sample_02_1212 Brain GBM30 433 5 437 21 0 55 82 RNF216,RNF216-IT1,MIR6874
SE_02_097200670 chr7:5690917-5704628 Sample_02_0972 Brain H3.3K27M-KO_BT245-D2p8-Rx_R1_cells 670 6 423 20 0 55 72 RNF216,RNF216-IT1,MIR6874
SE_02_085700422 chr7:5691084-5705380 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 422 4 435 20 0 55 47 RNF216,RNF216-IT1,MIR6874
SE_02_080100474 chr7:5691146-5704523 Sample_02_0801 Brain 2235 474 5 411 20 0 54 39 RNF216,RNF216-IT1,MIR6874
SE_02_097800520 chr7:5691198-5704918 Sample_02_0978 Brain 2168_IDH1 520 7 420 20 0 55 33 RNF216,RNF216-IT1,MIR6874
SE_02_150900494 chr7:5691374-5704422 Sample_02_1509 Lung H3122_LR 494 6 403 19 0 54 10 RNF216,RNF216-IT1,MIR6874
SE_02_097300543 chr7:5691901-5704531 Sample_02_0973 Brain H3.3K27M-KO_BT245-c4p6-Rx_R2_cells 543 6 390 20 0 47 0 RNF216,RNF216-IT1,MIR6874
SE_02_149300914 chr7:5691934-5714340 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 914 5 720 43 0 59 91 RNF216,MIR6874,RNF216-IT1
SE_02_094400108 chr7:5692426-5704606 Sample_02_0944 Brain TS576 108 5 375 20 0 48 0 RNF216,RNF216-IT1,MIR6874
SE_02_100400158 chr7:5692864-5703266 Sample_02_1004 Brain Lateral temporal lobe_10T_Old 158 2 327 17 0 40 0 RNF216,RNF216-IT1,MIR6874
Genomic distribution of SEs associated with MIR6874
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR6874

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)