SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000275458
Gene: MIR6809 Gene type: miRNA
Strand: - External links:
Genomic region: chr2:217900513-217900628 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_136000192 chr2:217306334-217371472 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 192 24 1664 127 4 185 210 DIRC3,MIR6809
SE_02_105900534 chr2:217312929-217342824 Sample_02_1059 Bone A673_WT 534 7 730 30 0 76 210 DIRC3,MIR6809
SE_02_147300536 chr2:217312929-217342824 Sample_02_1473 Bone A-673 536 7 730 30 0 76 210 DIRC3,MIR6809
SE_02_139800532 chr2:217355872-217401692 Sample_02_1398 Bone U2OS_siNC 532 19 1245 89 4 134 0 DIRC3,MIR6809
SE_02_052400428 chr2:217609787-217624141 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 428 6 424 20 0 76 0 DIRC3,MIR6809
SE_01_010700300 chr2:217621752-217715409 Sample_01_0107 Esophagus esophagus squamous epithelium 300 34 2468 110 5 321 0 DIRC3,MIR6809
SE_02_046500001 chr2:217775684-218010488 Sample_02_0465 Adipose subcutaneous adipocytes 1 143 6969 339 30 847 5264 TNS1,MIR6809,RUFY4,DIRC3
SE_01_009300004 chr2:217777697-218032352 Sample_01_0093 Aorta ascending aorta 4 78 7549 381 33 914 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_155300008 chr2:217784885-218030541 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 8 107 7291 356 32 911 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_096700006 chr2:217785170-217954287 Sample_02_0967 Brain H3.3K27M_JN57 6 60 5033 246 17 673 4870 TNS1,MIR6809,DIRC3
SE_01_011000002 chr2:217785270-218032475 Sample_01_0110 Aorta thoracic aorta_37y 2 108 7363 364 32 914 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_046600006 chr2:217785452-218018037 Sample_02_0466 Adipose visceral adipocytes 6 134 6929 324 30 879 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_110200121 chr2:217787235-217966465 Sample_02_1102 Brain LA-N-5 121 95 5403 256 23 713 4870 TNS1,MIR6809,DIRC3
SE_02_143301167 chr2:217787459-217877933 Sample_02_1433 Bone A673 STAG2 null 1167 57 2699 205 12 361 3136 TNS1,MIR6809,DIRC3
SE_00_005100005 chr2:217788960-218010341 Sample_00_0051 Adrenal gland adrenal gland 30y 5 197 6596 303 29 841 5264 TNS1,MIR6809,RUFY4,DIRC3
SE_02_098900015 chr2:217789083-217995163 Sample_02_0989 Kidney kidney cortex_WT 15 108 6167 279 25 773 5131 TNS1,MIR6809,RUFY4,DIRC3
SE_02_119100292 chr2:217789354-217869986 Sample_02_1191 Brain GBM25 292 27 2427 187 10 359 3136 TNS1,MIR6809,DIRC3
SE_02_091700002 chr2:217789428-218029031 Sample_02_0917 Heart left ventricle_DCM_LV1433 2 94 7094 332 31 907 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_089100001 chr2:217789444-218004710 Sample_02_0891 Heart left ventricle_LV1202 1 70 6432 292 29 816 5264 TNS1,MIR6809,RUFY4,DIRC3
SE_02_088800001 chr2:217789447-218028861 Sample_02_0888 Heart left ventricle_LV1160 1 88 7091 331 31 904 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_155900062 chr2:217789449-217880095 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 62 42 2678 201 13 364 3136 TNS1,MIR6809,DIRC3
SE_01_009400007 chr2:217789454-218024083 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 7 45 6962 319 31 892 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_01_009700060 chr2:217789462-217872556 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 60 19 2484 190 11 360 3136 TNS1,MIR6809,DIRC3
SE_02_090100002 chr2:217789465-218028949 Sample_02_0901 Heart left ventricle_LV1471 2 101 7092 331 31 904 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_01_010700005 chr2:217789473-218010994 Sample_01_0107 Esophagus esophagus squamous epithelium 5 72 6587 299 29 847 5264 TNS1,MIR6809,RUFY4,DIRC3
SE_02_061100343 chr2:217789479-217881403 Sample_02_0611 Liposarcoma DDLPS_T1 343 36 2718 204 14 370 3273 TNS1,MIR6809,DIRC3
SE_02_118700421 chr2:217789487-217879990 Sample_02_1187 Brain GBM16 421 22 2671 200 12 364 3136 TNS1,MIR6809,DIRC3
SE_02_090000001 chr2:217789498-218022706 Sample_02_0900 Heart left ventricle_LV1452 1 102 6924 318 31 884 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_089600001 chr2:217789509-218028991 Sample_02_0896 Heart left ventricle_LV1294 1 82 7090 331 31 907 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_01_010400005 chr2:217789519-217965254 Sample_01_0104 Lung upper lobe of left lung 5 62 5275 248 23 712 4870 TNS1,MIR6809,DIRC3,CXCR1
SE_02_088900001 chr2:217789521-218029701 Sample_02_0889 Heart left ventricle_LV1183 1 59 7110 337 32 908 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_00_004600001 chr2:217789529-217989387 Sample_00_0046 Heart right ventricle_34y 1 111 5974 269 25 762 5002 TNS1,MIR6809,RUFY4,DIRC3,CXCR2
SE_02_155800008 chr2:217789576-217869909 Sample_02_1558 Gastrointestinal Stromal GIST-7_PDGFRA e18 8 42 2417 185 10 359 3136 TNS1,MIR6809,DIRC3
SE_02_091000003 chr2:217789582-218028914 Sample_02_0910 Heart left ventricle_DCM_LV1275 3 86 7087 331 31 904 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_089200001 chr2:217789584-218004474 Sample_02_0892 Heart left ventricle_LV1215 1 68 6423 290 28 816 5264 TNS1,MIR6809,RUFY4,DIRC3
SE_02_089800001 chr2:217789586-218029282 Sample_02_0898 Heart left ventricle_LV1356 1 87 7099 334 31 908 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_01_009800003 chr2:217789589-218029189 Sample_01_0098 Heart left ventricle_51y 3 55 7095 333 31 908 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_090400002 chr2:217789592-218028963 Sample_02_0904 Heart left ventricle_DCM_LV1028 2 74 7089 331 31 907 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_091600001 chr2:217789656-217989350 Sample_02_0916 Heart left ventricle_DCM_LV1392 1 87 5968 269 25 762 5002 TNS1,MIR6809,RUFY4,DIRC3
SE_02_089900001 chr2:217789714-218022175 Sample_02_0899 Heart left ventricle_LV1400 1 103 6893 317 31 880 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_090200001 chr2:217789762-218004996 Sample_02_0902 Heart left ventricle_LV1558 1 96 6431 292 29 817 5264 TNS1,MIR6809,RUFY4,DIRC3
SE_02_091900001 chr2:217789852-218004634 Sample_02_0919 Heart left ventricle_DCM_LV1532 1 102 6415 287 28 816 5264 TNS1,MIR6809,RUFY4,DIRC3
SE_02_091500001 chr2:217789885-218018795 Sample_02_0915 Heart left ventricle_DCM_LV1371 1 98 6797 310 31 880 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_090800003 chr2:217789949-218029322 Sample_02_0908 Heart left ventricle_DCM_LV1262 3 94 7085 330 31 907 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_090700005 chr2:217789970-218028886 Sample_02_0907 Heart left ventricle_DCM_LV1223 5 99 7072 326 31 903 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_091300002 chr2:217790016-218029432 Sample_02_0913 Heart left ventricle_DCM_LV1304 2 86 7085 331 32 907 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_089300002 chr2:217790062-217989407 Sample_02_0893 Heart left ventricle_LV1226 2 73 5955 264 25 761 5002 TNS1,MIR6809,RUFY4,DIRC3
SE_02_090300002 chr2:217790070-218005998 Sample_02_0903 Heart left ventricle_DCM_LV1009 2 96 6448 288 29 820 5264 TNS1,MIR6809,RUFY4,DIRC3
SE_02_090600001 chr2:217790091-218024892 Sample_02_0906 Heart left ventricle_DCM_LV1072 1 84 6961 317 31 900 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_091400108 chr2:217790113-217860281 Sample_02_0914 Heart left ventricle_DCM_LV1342 108 43 2126 170 8 344 3136 TNS1,MIR6809,DIRC3
SE_02_112900001 chr2:217790170-218018893 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 1 132 6790 308 31 878 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_01_011500023 chr2:217790245-217869228 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 23 27 2368 179 10 355 3136 TNS1,MIR6809,DIRC3
SE_02_091200002 chr2:217790249-218005258 Sample_02_0912 Heart left ventricle_DCM_LV1300 2 80 6420 288 29 815 5264 TNS1,MIR6809,RUFY4,DIRC3
SE_02_090500003 chr2:217790592-218024838 Sample_02_0905 Heart left ventricle_DCM_LV1033 3 87 6937 317 31 897 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_061400008 chr2:217793226-218018613 Sample_02_0614 Liposarcoma MLPS_T2 8 87 6700 301 31 876 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_02_053900193 chr2:217793747-217939920 Sample_02_0539 Brain SK-N-BE_2_-C_GFP_control 193 53 4373 212 17 618 4744 TNS1,MIR6809,DIRC3
SE_02_143201220 chr2:217795924-217879972 Sample_02_1432 Bone A673 STAG2 WT 1220 43 2483 181 12 353 3136 TNS1,MIR6809,DIRC3
SE_02_092500195 chr2:217795968-217861552 Sample_02_0925 Heart fetal heart_PCW17_12570 195 35 1997 158 8 336 3136 TNS1,MIR6809,DIRC3
SE_02_088700134 chr2:217797302-217871366 Sample_02_0887 Heart left ventricle_LV1121 134 29 2222 165 10 349 3136 TNS1,MIR6809,DIRC3
SE_02_089700004 chr2:217797307-217989672 Sample_02_0897 Heart left ventricle_LV1325 4 85 5751 246 25 751 5002 TNS1,MIR6809,RUFY4,DIRC3
SE_02_089400114 chr2:217797414-217859781 Sample_02_0894 Heart left ventricle_LV1248 114 27 1900 152 8 334 3113 TNS1,MIR6809,DIRC3
SE_02_091800074 chr2:217797417-217863506 Sample_02_0918 Heart left ventricle_DCM_LV1437 74 42 2000 154 8 338 3136 TNS1,MIR6809,DIRC3
SE_02_092400294 chr2:217797427-217860264 Sample_02_0924 Heart fetal heart_PCW10_12569 294 32 1917 152 8 335 3136 TNS1,MIR6809,DIRC3
SE_02_142700026 chr2:217797448-218017938 Sample_02_1427 Shoulder fibroblast_343 26 75 6555 286 30 865 5264 TNS1,MIR6809,DIRC3,RUFY4,CXCR2P1
SE_00_005700001 chr2:217797475-217965145 Sample_00_0057 Heart right ventricle 3y 1 112 5042 225 23 700 4870 TNS1,MIR6809,DIRC3,CXCR2
SE_02_091100002 chr2:217797476-217989809 Sample_02_0911 Heart left ventricle_DCM_LV1290 2 96 5752 246 25 751 5002 TNS1,MIR6809,RUFY4,DIRC3
SE_02_089500001 chr2:217797544-217989397 Sample_02_0895 Heart left ventricle_LV1259 1 65 5743 246 25 751 5002 TNS1,MIR6809,RUFY4,DIRC3
SE_02_112800067 chr2:217798201-217862055 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 67 38 1948 153 8 336 3136 TNS1,MIR6809,DIRC3
SE_01_010600101 chr2:217804326-217871726 Sample_01_0106 Adrenal gland adrenal gland 54y 101 17 2024 155 10 323 2291 TNS1,MIR6809,DIRC3
SE_00_005501032 chr2:217804463-217859454 Sample_00_0055 Spleen spleen 34y 1032 27 1682 141 7 307 2175 TNS1,MIR6809,DIRC3
SE_02_142800651 chr2:217805340-217877043 Sample_02_1428 Shoulder fibroblast_316 651 24 2121 160 11 299 2189 TNS1,MIR6809,DIRC3
SE_02_119400345 chr2:217805365-217880033 Sample_02_1194 Brain GBM28 345 26 2200 166 11 302 2189 TNS1,MIR6809,DIRC3
SE_02_061300192 chr2:217807525-217869959 Sample_02_0613 Liposarcoma MLPS_T1 192 35 1898 149 9 297 2189 TNS1,MIR6809
SE_02_119900160 chr2:217814650-217882218 Sample_02_1199 Brain GBM35 160 23 2003 157 12 287 1897 TNS1,MIR6809
SE_02_083101003 chr2:217814728-217827768 Sample_02_0831 Umblical vein HUVECs_TNF0min 1003 5 382 29 2 75 527 TNS1,DIRC3,MIR6809
SE_02_097700079 chr2:217815715-217947877 Sample_02_0977 Brain 2089_H3.3K27WT 79 36 3947 182 15 561 3313 TNS1,MIR6809
SE_02_118300036 chr2:217815742-217953862 Sample_02_1183 Brain GBM12 36 50 4108 183 15 580 3313 TNS1,MIR6809
SE_02_112500054 chr2:217815959-217863990 Sample_02_1125 Adipose visceral adipose_CS_VC06 54 19 1476 126 6 259 1579 TNS1,MIR6809
SE_02_081601894 chr2:217816005-217869573 Sample_02_0816 Ovary Clear cell ovarian cancer 1894 19 1636 133 8 269 1579 TNS1,MIR6809
SE_02_096600313 chr2:217816153-217879974 Sample_02_0966 Brain H3.3K27M_JN29-BS3 313 14 1892 148 10 274 1579 TNS1,MIR6809
SE_02_121200292 chr2:217816368-217879840 Sample_02_1212 Brain GBM30 292 17 1884 147 10 274 1579 TNS1,MIR6809
SE_02_137400083 chr2:217816414-217942378 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 83 57 3789 176 15 542 3187 TNS1,MIR6809
SE_02_119200179 chr2:217816679-217879940 Sample_02_1192 Brain GBM26 179 15 1874 146 10 268 1579 TNS1,MIR6809
SE_01_010900006 chr2:217816792-217988664 Sample_01_0109 Colon transverse colon_54y 6 41 5157 215 22 653 3445 TNS1,MIR6809,RUFY4
SE_01_010500685 chr2:217816945-217860151 Sample_01_0105 Thyroid gland thyroid gland_54y 685 13 1346 121 6 239 1579 TNS1,MIR6809
SE_02_054000174 chr2:217817940-217941471 Sample_02_0540 Brain SK-N-BE_2_-C_PI3K_engineered 174 36 3720 170 15 510 3097 TNS1,MIR6809
SE_02_053400306 chr2:217819761-217880071 Sample_02_0534 Blood vessel Circle of Willis_60y 306 17 1771 136 9 224 1267 TNS1,MIR6809
SE_02_097900451 chr2:217819781-217873930 Sample_02_0979 Brain JN14-BS1_H3.3K27M 451 18 1617 127 8 220 1267 TNS1,MIR6809
SE_02_119600430 chr2:217819861-217881419 Sample_02_1196 Brain GBM32 430 29 1816 140 11 230 1407 TNS1,MIR6809
SE_02_118600031 chr2:217819887-217954906 Sample_02_1186 Brain GBM15 31 42 4005 169 14 532 3001 TNS1,MIR6809
SE_02_118100212 chr2:217820421-217879772 Sample_02_1181 Brain GBM10 212 16 1749 133 9 224 1267 TNS1,MIR6809
SE_02_120000100 chr2:217820430-217947760 Sample_02_1200 Brain GBM36 100 30 3792 164 14 511 3001 TNS1,MIR6809
SE_02_118500269 chr2:217821765-217881379 Sample_02_1185 Brain GBM14 269 16 1752 135 11 227 1327 TNS1,MIR6809
SE_02_137700042 chr2:217822041-217944346 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 42 42 3638 159 14 493 2876 TNS1,MIR6809
SE_02_158300065 chr2:217822147-217938650 Sample_02_1583 Fetal lung IMR90_empty_GM 65 33 3489 158 14 467 2729 TNS1,MIR6809
SE_02_101800041 chr2:217823820-217850462 Sample_02_1018 Erythroblast CD34+ Hematopoietic stem/progenitor cells_12 days 41 12 854 81 3 147 953 TNS1,MIR6809
SE_02_136300528 chr2:217826222-217843817 Sample_02_1363 Blood Hudep2 528 7 567 42 2 88 513 TNS1,MIR6809
SE_02_084300010 chr2:217826357-217843750 Sample_02_0843 Umbilical cord blood HSPC-derived late erythroid precursors 10 9 560 41 2 88 513 TNS1,MIR6809
SE_02_142600083 chr2:217826556-217941482 Sample_02_1426 Shoulder fibroblast_341 83 38 3461 152 13 470 2729 TNS1,MIR6809
SE_02_142500538 chr2:217827337-217860010 Sample_02_1425 Shoulder fibroblast_384 538 7 1028 98 4 183 1121 TNS1,MIR6809
SE_02_117401015 chr2:217827432-217853832 Sample_02_1174 Brain GBM02 1015 15 851 78 2 151 953 TNS1,MIR6809
SE_02_118400455 chr2:217834973-217881491 Sample_02_1184 Brain GBM13 455 20 1355 112 8 180 965 TNS1,MIR6809
SE_02_121000338 chr2:217835185-217859227 Sample_02_1210 Brain GBM17 338 9 746 83 2 149 641 TNS1,MIR6809
SE_02_118200193 chr2:217835759-217880124 Sample_02_1182 Brain GBM11 193 15 1294 109 7 169 725 TNS1,MIR6809
SE_02_119301353 chr2:217835785-217880045 Sample_02_1193 Brain GBM27 1353 8 1286 108 6 169 725 TNS1,MIR6809
SE_02_083901228 chr2:217835888-217860286 Sample_02_0839 Embryo hNPCs_K755R/+ 1228 8 762 83 2 151 712 TNS1,MIR6809
SE_02_121100763 chr2:217835979-217879876 Sample_02_1211 Brain GBM21 763 14 1280 107 6 169 704 TNS1,MIR6809
SE_02_095600384 chr2:217836000-217879571 Sample_02_0956 Brain IDH1_2658 384 13 1272 107 6 169 697 TNS1,MIR6809
SE_02_138000108 chr2:217836001-217944117 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 108 44 3224 136 11 442 2383 TNS1,MIR6809
SE_02_112200120 chr2:217836672-217859599 Sample_02_1122 Adipose visceral adipose_CS_H507 120 6 718 83 2 133 563 TNS1,MIR6809
SE_02_143800198 chr2:217836708-217944369 Sample_02_1438 Liver LSEC 198 25 3207 136 11 428 2342 TNS1,MIR6809
SE_02_152700325 chr2:217836737-217881374 Sample_02_1527 Embryo naive embryonic stem cell 325 21 1306 112 8 157 729 TNS1,MIR6809
SE_02_110800066 chr2:217837183-217965994 Sample_02_1108 Brain SK-N-BE_2_-C 66 41 3875 156 17 497 2342 TNS1,MIR6809
SE_02_114500034 chr2:217838380-217966037 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 34 66 3828 156 17 492 2342 TNS1,MIR6809
SE_02_083101192 chr2:217841259-217851614 Sample_02_0831 Umblical vein HUVECs_TNF0min 1192 6 336 55 0 68 440 TNS1,MIR6809
SE_02_074100617 chr2:217845349-217868968 Sample_02_0741 Muscle RH30 617 8 692 57 4 110 608 TNS1,MIR6809
SE_02_110600317 chr2:217854683-217965053 Sample_02_1106 Brain NGP 317 51 3276 88 17 386 1902 TNS1,MIR6809
SE_02_087500690 chr2:217865299-217944768 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 690 30 2342 50 8 291 1734 TNS1,MIR6809,RUFY4
SE_02_143600242 chr2:217875714-217944650 Sample_02_1436 Liver LSEC-Ctrl 242 19 2064 35 5 281 1734 TNS1,MIR6809
SE_02_081901056 chr2:217896856-217906927 Sample_02_0819 Ovary Mucinous ovarian cancer 1056 3 299 6 0 54 503 TNS1,MIR6809
SE_00_005800339 chr2:217897068-217912217 Sample_00_0058 Stomach stomach 34y 339 6 431 8 0 69 591 TNS1,MIR6809
SE_02_112700105 chr2:217903913-217914379 Sample_02_1127 Adipose visceral adipose_CTL_H465 105 6 286 6 0 45 312 TNS1,MIR6809
Genomic distribution of SEs associated with MIR6809
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR6809

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)