SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000263705
Gene: MIR5689 Gene type: miRNA
Strand: + External links:
Genomic region: chr6:10439717-10439794 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_048100207 chr6:10425207-10454770 Sample_02_0481 Mammary gland MDA-MB231 207 7 804 37 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_099200314 chr6:10425517-10453510 Sample_02_0992 Mammary gland MDA-MB-231_Par 314 5 766 36 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_099000143 chr6:10425536-10453467 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 143 5 762 35 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_153800209 chr6:10425647-10452960 Sample_02_1538 Mammary gland MDA-MB-231 209 4 738 34 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_099100328 chr6:10425749-10453753 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 328 5 766 36 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_135100728 chr6:10425802-10452651 Sample_02_1351 Mammary gland MDA-MB-231-Erbeta_vehicle 728 4 718 31 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_153600565 chr6:10425810-10452471 Sample_02_1536 Mammary gland MDA-MB-231_ER?_L540Q_0min 565 7 716 31 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_135300924 chr6:10425913-10452825 Sample_02_1353 Mammary gland MDA-MB-231-Erbeta_TNFa 924 4 723 31 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_072400153 chr6:10426041-10465747 Sample_02_0724 Pancreatic duct AsPC1_GFP_DOX 153 8 1155 60 5 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_084600570 chr6:10426054-10453604 Sample_02_0846 Mammary gland MDA-MB-231_untreat 570 7 762 36 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_126400843 chr6:10426065-10472657 Sample_02_1264 Bone Im-GCT-4072_G34W KO 843 14 1407 89 8 28 385 MIR5689,LINC00518,GCNT2,TFAP2A,TFAP2A-AS1
SE_02_126600482 chr6:10426080-10481871 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 482 12 1926 124 10 28 385 MIR5689,LINC00518,GCNT2,TFAP2A,TFAP2A-AS1
SE_02_125900428 chr6:10426083-10465613 Sample_02_1259 Bone Im-GCT-3504_G34W-repair_WT_4C7 428 7 1150 60 5 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_126500442 chr6:10426128-10482157 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 442 10 1956 126 10 28 385 MIR5689,LINC00518,GCNT2,TFAP2A,TFAP2A-AS1
SE_02_126000998 chr6:10426165-10464749 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 998 6 1106 60 5 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_071700108 chr6:10426176-10465737 Sample_02_0717 Pancreas HPAFII_GFP_DOX 108 9 1152 60 5 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_081101045 chr6:10426186-10454889 Sample_02_0811 Thyroid BCPAP 1045 7 792 37 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_071400508 chr6:10426240-10453284 Sample_02_0714 Pancreas SUIT2_MTV 508 7 741 34 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1,GCNT2
SE_02_072100237 chr6:10426281-10465411 Sample_02_0721 Pancreas HPAFII_TP63dN_DOX 237 13 1137 60 5 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_070400053 chr6:10426318-10465740 Sample_02_0704 Pancreas HPAFII WT 53 13 1148 60 5 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_057200901 chr6:10426364-10452635 Sample_02_0572 Brain LN229_1_mM_glucose 901 8 710 31 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_070700579 chr6:10426392-10464308 Sample_02_0707 Pancreas BxPC3 WT 579 12 1083 59 5 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_153400472 chr6:10426397-10452664 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 472 5 709 31 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_122800683 chr6:10426408-10453343 Sample_02_1228 Mammary gland MDA-MB-231_2 683 6 738 34 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_071500614 chr6:10426485-10452778 Sample_02_0715 Pancreas SUIT2_TP63dN 614 8 707 31 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1,GCNT2
SE_02_151500221 chr6:10426685-10465480 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 221 8 1127 60 5 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_151600375 chr6:10427042-10452691 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 375 8 690 31 1 28 385 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_137000165 chr6:10429820-10465742 Sample_02_1370 Pancreas Patu8902-untreated 165 14 1051 56 5 20 236 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_103100380 chr6:10430425-10467986 Sample_02_1031 Head and neck SCC1 contol 380 19 1102 67 7 17 169 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_103200367 chr6:10431889-10467904 Sample_02_1032 Head and neck SCC1 JQ1 367 15 1064 63 7 14 166 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_093801198 chr6:10440770-10453754 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 1198 3 376 20 0 12 0 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_126900610 chr6:10440808-10481678 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 610 5 1500 107 9 12 0 MIR5689,GCNT2,TFAP2A,TFAP2A-AS1,LINC00518
SE_02_093500514 chr6:10441081-10453398 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 514 3 354 18 0 12 0 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_080700080 chr6:10441636-10451777 Sample_02_0807 Pancreatic duct pancreatic epithelial cells_ARID1A_KO 80 5 273 11 0 12 0 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_070500438 chr6:10448399-10456267 Sample_02_0705 Pancreas AsPC1 WT 438 1 225 16 0 0 0 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
SE_02_136500961 chr6:10448955-10455762 Sample_02_1365 Pancreas AsPC1-untreated 961 1 204 15 0 0 0 MIR5689,LINC00518,TFAP2A,TFAP2A-AS1
Genomic distribution of SEs associated with MIR5689
Genome Browser

The strength of the tissue affected by the gene

Expression of MIR5689

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)