Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000266478
Gene: MIR5197 Gene type: miRNA
Strand: + External links:
Genomic region: chr5:143679860-143679971 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_111101003 chr5:143528026-143570006 Sample_02_1111 Other HGrC1_SMAD2/3KO 1003 16 1064 48 4 120 0 NR3C1,MIR5197
SE_02_077000902 chr5:143528069-143598383 Sample_02_0770 Ovary OVCA429_shLuc 902 27 1905 62 9 191 0 MIR5197
SE_02_158300830 chr5:143528201-143563382 Sample_02_1583 Fetal lung IMR90_empty_GM 830 15 879 46 3 114 0 NR3C1,MIR5197
SE_02_116200184 chr5:143533441-143602284 Sample_02_1162 Stomach YCC11 184 37 1864 52 10 198 0 MIR5197
SE_02_143700492 chr5:143534426-143597866 Sample_02_1437 Liver LSEC-TNF 492 19 1716 48 9 191 0 MIR5197
SE_02_061000774 chr5:143534510-143557468 Sample_02_0610 Liposarcoma MLS 1765-92 774 5 551 29 2 62 0 NR3C1,MIR5197
SE_02_088200715 chr5:143535440-143557432 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 715 7 523 28 2 57 0 NR3C1,MIR5197
SE_02_087900642 chr5:143535521-143557659 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 642 5 529 28 2 64 0 NR3C1,MIR5197
SE_02_086701066 chr5:143535592-143576137 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1066 22 1056 37 5 130 0 NR3C1,MIR5197
SE_02_143601155 chr5:143535604-143558581 Sample_02_1436 Liver LSEC-Ctrl 1155 7 548 28 2 69 0 NR3C1,MIR5197
SE_02_049900426 chr5:143535627-143596784 Sample_02_0499 Fetal lung IMR90 IR Senescence 426 16 1648 45 9 183 0 MIR5197
SE_02_072701209 chr5:143535696-143558597 Sample_02_0727 Fetal lung IMR90_Etoposide 1209 8 546 28 2 69 0 NR3C1,MIR5197
SE_02_047400631 chr5:143535731-143606704 Sample_02_0474 Fibroblast umbilical cord Fibroblast 631 14 1915 48 11 210 0 MIR5197
SE_02_053000744 chr5:143543620-143578056 Sample_02_0530 Mammary gland MCF10A 744 14 927 28 5 106 0 MIR5197
SE_02_138900064 chr5:143547671-143608157 Sample_02_1389 Peripheral blood SUP-M2_ALK+ 64 14 1691 31 11 188 0 MIR5197
SE_02_047600140 chr5:143552884-143597210 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 140 20 1268 17 9 147 0 MIR5197
SE_02_047500171 chr5:143553551-143603000 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 171 19 1409 20 10 150 0 MIR5197
SE_02_078200826 chr5:143557251-143607872 Sample_02_0782 Blood MEC1 826 11 1437 20 9 161 0 MIR5197
SE_02_109700038 chr5:143558272-143718142 Sample_02_1097 Haematopoietic and lymphoid tissue 697 38 79 4380 70 19 509 41 MIR5197
SE_02_107700202 chr5:143560594-143604988 Sample_02_1077 Mammary gland MCF7_TET2KO-E2 202 16 1280 18 9 112 0 MIR5197
SE_02_045500131 chr5:143573581-143634723 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 131 16 1707 32 9 129 0 MIR5197
SE_02_133100752 chr5:143573664-143609602 Sample_02_1331 Blood Molm13_CTRL 752 10 1014 14 7 91 0 MIR5197
SE_02_134100348 chr5:143574118-143613110 Sample_02_1341 Blood MV411 348 12 1090 14 7 92 0 MIR5197
SE_02_136000952 chr5:143575369-143597768 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 952 8 648 11 4 56 0 MIR5197
SE_02_058800732 chr5:143576626-143600847 Sample_02_0588 Cervix HeLa Kyoto_untreated 732 10 701 11 5 57 0 MIR5197
SE_02_058900720 chr5:143576738-143597609 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 720 7 603 9 4 55 0 MIR5197
SE_02_151100423 chr5:143577146-143600982 Sample_02_1511 Lung H3122_untreated 423 10 694 11 5 56 0 MIR5197
SE_02_140200164 chr5:143582176-143594416 Sample_02_1402 Blood MM.1S_GNE-781 164 4 357 2 3 23 0 MIR5197
SE_02_139000198 chr5:143582568-143608255 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 198 6 715 10 5 82 0 MIR5197
SE_02_138800025 chr5:143582574-143635647 Sample_02_1388 Peripheral blood JB6_ALK+ 25 13 1452 29 7 120 0 MIR5197
SE_02_045700284 chr5:143585130-143614319 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 284 12 792 11 5 86 0 MIR5197
SE_02_125200510 chr5:143589357-143608268 Sample_02_1252 Bone marrow RS4_11_DMSO_10h 510 12 521 9 5 72 0 MIR5197
SE_02_138600593 chr5:143592372-143607925 Sample_02_1386 Peripheral blood Karpas-299_ALK+ 593 8 423 8 3 72 0 MIR5197
SE_02_150900418 chr5:143593642-143598194 Sample_02_1509 Lung H3122_LR 418 1 124 7 1 29 0 MIR5197
SE_02_048101042 chr5:143623328-143659613 Sample_02_0481 Mammary gland MDA-MB231 1042 17 981 13 5 126 0 MIR5197
SE_02_053100265 chr5:143623964-143660597 Sample_02_0531 Mammary gland MDA-MB-231 265 11 987 12 6 127 0 MIR5197
SE_02_047500238 chr5:143623965-143692325 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 238 15 1828 24 6 224 41 MIR5197
SE_02_151100202 chr5:143624005-143674950 Sample_02_1511 Lung H3122_untreated 202 17 1377 22 6 166 0 MIR5197
SE_02_099000785 chr5:143624220-143659478 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 785 6 954 11 3 126 0 MIR5197
SE_02_139000852 chr5:143624323-143633128 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 852 6 224 8 0 12 0 MIR5197
SE_02_136000944 chr5:143629005-143675587 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 944 12 1261 15 4 161 0 MIR5197
SE_02_150200128 chr5:143860957-143903470 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 128 13 1262 8 3 124 0 HMHB1,MIR5197
SE_02_141000495 chr5:143862545-143897763 Sample_02_1410 Brain GSC6 495 8 1045 8 3 111 0 HMHB1,MIR5197
SE_02_150300081 chr5:143865252-143934004 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 81 21 2078 12 4 172 0 HMHB1,MIR5197
SE_02_076600370 chr5:143869623-143897142 Sample_02_0766 Ovary PEO1 370 10 809 6 3 75 0 HMHB1,MIR5197
SE_02_149800158 chr5:143870185-143898130 Sample_02_1498 Brain SHEP-21N_DOX_2h 158 9 823 6 3 79 0 HMHB1,MIR5197
SE_02_150100158 chr5:143870203-143899258 Sample_02_1501 Brain SHEP-21N_NOSPIKE 158 10 851 6 3 91 0 HMHB1,MIR5197
SE_02_085800496 chr5:143874372-143898143 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 496 4 705 4 3 52 0 HMHB1,MIR5197
SE_02_152200944 chr5:143874948-143898123 Sample_02_1522 Skin A375 RTKi 944 7 688 4 2 51 0 HMHB1,MIR5197
SE_02_157100973 chr5:143886329-143897720 Sample_02_1571 Fibroblast Fibroblast cells 973 2 341 1 1 37 0 HMHB1,MIR5197
SE_02_105400470 chr5:143911482-143934238 Sample_02_1054 Esophagus SKGT4 470 8 677 3 1 50 0 HMHB1,MIR5197
SE_02_135500492 chr5:143912309-143925536 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 492 2 379 2 1 35 0 HMHB1,MIR5197
SE_02_063800918 chr5:143912698-143925241 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 918 9 354 2 1 35 0 HMHB1,MIR5197
SE_02_157100323 chr5:143912789-143925063 Sample_02_1571 Fibroblast Fibroblast cells 323 5 348 2 1 35 0 HMHB1,MIR5197
SE_02_061001148 chr5:143913094-143925522 Sample_02_0610 Liposarcoma MLS 1765-92 1148 3 359 2 1 35 0 HMHB1,MIR5197

Genomic distribution of SEs associated with MIR5197

The strength of the tissue affected by the gene


Expression of MIR5197