SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000166482
Gene: MFAP4 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:19383442-19387190 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_000301509 chr17:19361777-19405594 Sample_00_0003 Adrenal gland adrenal-gland_97d 1509 6 1052 85 2 183 2029 B9D1,MAPK7,MFAP4,RNF112,MIR1180
SE_00_004300188 chr17:19361818-19425864 Sample_00_0043 Stomach stomach_96d 188 8 1541 123 9 295 3438 B9D1,MAPK7,MFAP4,RNF112,MIR1180
SE_00_003500267 chr17:19362281-19403424 Sample_00_0035 Sigmoid colon sigmoid-colon 267 8 991 80 2 183 2029 B9D1,MAPK7,MFAP4,RNF112,MIR1180
SE_02_031600457 chr17:19364100-19403676 Sample_02_0316 Neuroblastoma CHP212 457 4 955 72 2 178 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_008401392 chr17:19367724-19400840 Sample_01_0084 Spleen spleen 1392 4 805 61 2 178 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_007300268 chr17:19367743-19400655 Sample_01_0073 Coronary artery coronary-artery 268 4 799 61 2 178 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_006900585 chr17:19367833-19400737 Sample_01_0069 Adrenal gland adrenal-gland 585 6 803 60 2 178 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_037000642 chr17:19368903-19400630 Sample_02_0370 Skeletal muscle RH4 642 3 777 60 2 178 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_007500441 chr17:19369321-19400456 Sample_01_0075 Esophagus squamous epithelium esophagus-squamous-epithelium 441 5 767 60 2 178 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_00_000600726 chr17:19369405-19400859 Sample_00_0006 Blood CD14-positive-monocyte 726 5 773 60 2 178 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_007700530 chr17:19369936-19399491 Sample_01_0077 Gastroesophageal sphincter gastroesophageal-sphincter 530 3 727 56 2 177 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_004001006 chr17:19370682-19398465 Sample_02_0040 Embryo PFG 1006 4 694 53 2 169 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_029900213 chr17:19376173-19403707 Sample_02_0299 Neuroblastoma CLB-MA 213 4 681 45 2 174 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_008900480 chr17:19376347-19399603 Sample_01_0089 Transverse colon transverse-colon 480 3 576 39 2 173 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_008600548 chr17:19376395-19399924 Sample_01_0086 Thoracic aorta thoracic-aorta 548 3 581 40 2 173 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_008300629 chr17:19376412-19399538 Sample_01_0083 Sigmoid colon sigmoid-colon 629 4 575 39 2 173 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_031300456 chr17:19376434-19402906 Sample_02_0313 Neuroblastoma SK-N-DZ 456 4 654 44 2 174 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_028400302 chr17:19376508-19393000 Sample_02_0284 Pelvis patient 119 302 1 422 25 2 166 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_00_003601321 chr17:19376647-19399210 Sample_00_0036 Small intestine small-intestine_108days 1321 3 559 38 2 173 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_00_001500263 chr17:19376841-19390847 Sample_00_0015 Lung IMR-90 263 2 364 21 2 166 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_00_004100902 chr17:19376857-19398924 Sample_00_0041 Stomach stomach_3y 902 3 553 38 2 173 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_00_002600493 chr17:19376890-19389124 Sample_00_0026 Muscle of trunk muscle-of-trunk 493 3 333 17 2 161 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_00_003400957 chr17:19377275-19399200 Sample_00_0034 Right cardiac atrium right-cardiac-atrium 957 3 546 35 2 173 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_001700496 chr17:19377301-19388726 Sample_02_0017 Embryo H9_ESC 496 3 308 12 2 161 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_00_002900165 chr17:19377413-19398760 Sample_00_0029 Ovary ovary 165 9 539 35 2 169 1880 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_00_000400269 chr17:19378726-19393262 Sample_00_0004 Aorta aorta 269 13 377 17 2 166 1589 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_009300853 chr17:19380579-19394048 Sample_01_0093 Aorta ascending aorta 853 1 344 18 2 140 1343 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_01_009200668 chr17:19380624-19403312 Sample_01_0092 Vagina vagina 668 4 557 36 2 148 1332 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_007000795 chr17:19381111-19399623 Sample_01_0070 Ascending aorta ascending-aorta 795 3 458 31 1 123 1260 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_112800516 chr17:19381261-19399156 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 516 6 445 30 1 116 1230 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_025200184 chr17:19381373-19416365 Sample_02_0252 Neuroblastoma IMR5-75-shMYCN-MYCN_high 184 4 848 55 4 215 2428 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_147800450 chr17:19381429-19402843 Sample_02_1478 Bone EW-3 450 6 529 36 1 112 1200 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_156000670 chr17:19381466-19402831 Sample_02_1560 Gastrointestinal Stromal GIST-9_PDGFRA e18 670 6 528 36 1 109 1196 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_01_009100705 chr17:19381557-19402794 Sample_01_0091 Uterus uterus 705 2 525 36 1 109 1169 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_015800494 chr17:19381577-19388660 Sample_02_0158 Brain U87_EGFRvIII_erlotinib 494 2 198 7 1 96 1165 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_147501057 chr17:19381588-19403244 Sample_02_1475 Bone CHLA-25 1057 3 532 36 1 109 1163 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_147400324 chr17:19381682-19402780 Sample_02_1474 Bone CHLA-10 324 6 521 36 1 107 1144 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_074701079 chr17:19381732-19414492 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 1079 5 792 52 4 156 1909 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_030700062 chr17:19381959-19412779 Sample_02_0307 Neuroblastoma SJNB12 62 4 736 51 4 126 1413 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_033800202 chr17:19382031-19402998 Sample_02_0338 Neuroblastoma BE2 202 6 512 36 1 98 1057 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_022600454 chr17:19382141-19399337 Sample_02_0226 Blood KOPTK1 454 2 419 30 1 97 1019 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_025100328 chr17:19382180-19413222 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 328 6 736 51 4 135 1481 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_011000625 chr17:19382213-19399338 Sample_01_0110 Aorta thoracic aorta_37y 625 4 415 30 1 93 997 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_031000355 chr17:19382294-19413567 Sample_02_0310 Neuroblastoma SJNB8 355 4 744 51 4 135 1527 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_034000384 chr17:19382303-19403025 Sample_02_0340 Brain BE2C_2 384 3 500 36 1 92 962 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_063000205 chr17:19382327-19402744 Sample_02_0630 Gastrointestinal Stromal GIST-T1_Imatinib 205 6 493 36 1 92 955 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_155400884 chr17:19382348-19402684 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 884 6 491 36 1 92 950 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_092101034 chr17:19382383-19401980 Sample_02_0921 Heart embryonic heart_CS22 1034 9 477 35 1 92 935 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_063100249 chr17:19382655-19400216 Sample_02_0631 Gastrointestinal Stromal GIST-T1_JQ1 249 7 425 33 1 83 892 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_106100633 chr17:19383003-19402772 Sample_02_1061 Bone TC71_WT 633 7 478 36 1 74 819 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_148800636 chr17:19383003-19402772 Sample_02_1488 Bone TC-71 636 7 478 36 1 74 819 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_01_010200218 chr17:19383017-19398661 Sample_01_0102 Artery tibial artery 218 4 380 30 1 68 814 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_01_011100609 chr17:19383088-19403486 Sample_01_0111 Brain SK-N-SH 609 5 490 36 1 74 800 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_148500484 chr17:19383211-19400355 Sample_02_1485 Bone SK-ES-1 484 5 412 34 1 71 777 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_092301057 chr17:19383344-19402427 Sample_02_0923 Heart fetal heart_PCW10_12522 1057 4 464 36 1 67 748 MAPK7,MFAP4,B9D1,RNF112,MIR1180
SE_02_022500360 chr17:19383436-19399156 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 360 2 382 30 1 65 727 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_01_003700770 chr17:19383451-19403246 Sample_01_0037 Liver hepatocyte 770 3 476 36 1 66 726 MAPK7,MFAP4,RNF112,B9D1,MIR1180
SE_02_110600442 chr17:19383567-19389758 Sample_02_1106 Brain NGP 442 1 169 10 1 58 712 MFAP4,B9D1,MAPK7,RNF112,MIR1180
SE_02_021100517 chr17:19383600-19410550 Sample_02_0211 Lung MRC-5_NFD_1DPT 517 5 627 47 2 66 704 MFAP4,MAPK7,RNF112,B9D1,MIR1180
SE_02_105801008 chr17:19383641-19406126 Sample_02_1058 Bone A673_SA2 Rescue 1008 5 536 42 1 61 699 MFAP4,B9D1,MAPK7,RNF112,MIR1180
SE_02_062900639 chr17:19383761-19398912 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 639 3 372 30 1 60 675 MFAP4,B9D1,MAPK7,RNF112,MIR1180
SE_02_119900715 chr17:19383837-19400342 Sample_02_1199 Brain GBM35 715 6 398 34 1 61 663 MFAP4,B9D1,MAPK7,RNF112,MIR1180
SE_02_112900849 chr17:19383901-19400520 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 849 8 401 34 1 61 647 MFAP4,B9D1,MAPK7,RNF112,MIR1180
SE_02_021000783 chr17:19384059-19410157 Sample_02_0210 Lung MRC-5_N_1DPT 783 8 610 47 2 61 616 MFAP4,MAPK7,RNF112,B9D1,MIR1180
SE_02_147700753 chr17:19384112-19398971 Sample_02_1477 Bone EW-22 753 5 365 30 1 60 606 MFAP4,B9D1,MAPK7,RNF112,MIR1180
SE_02_124500267 chr17:19384999-19403606 Sample_02_1245 Brain LAN5_Ethanol 267 9 449 33 0 44 418 MFAP4,B9D1,MAPK7,RNF112,MIR1180
SE_02_004300016 chr17:19424687-19471209 Sample_02_0043 Embryo endodermal CyT49_ES_D2 16 15 1156 84 0 0 0 MFAP4,MAPK7,RNF112
SE_02_075500012 chr17:19424814-19468957 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 12 7 1090 77 0 0 0 MAPK7,RNF112,B9D1,MFAP4
SE_02_075200091 chr17:19425426-19463235 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 91 9 908 62 0 0 0 MAPK7,RNF112,B9D1,MFAP4
SE_02_003800335 chr17:19426045-19471480 Sample_02_0038 Embryo DE 335 8 1131 82 0 0 0 MFAP4,MAPK7,RNF112
SE_02_106500511 chr17:19456748-19466708 Sample_02_1065 Lymphoma KARPAS-422_DMSO_8d 511 2 223 18 0 0 0 RNF112,MFAP4
Genomic distribution of SEs associated with MFAP4
Genome Browser

The strength of the tissue affected by the gene

Expression of MFAP4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)