Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | |
| Gene: | LOC728460 | Gene type: | |
| Strand: | External links: |
|
|
| Genomic region: | :- | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_017200200 | chr5:122123923-122184890 |
Sample_02_0172 | Lung | IMR-90_quiescent | 200 | 6 | 1818 | 43 | 3 | 149 | 470 | ZNF474,LOC728460,LOX |
| SE_02_017100215 | chr5:122124827-122184830 |
Sample_02_0171 | Lung | IMR-90_proliferating | 215 | 6 | 1788 | 42 | 3 | 138 | 470 | ZNF474,LOC728460,LOX |
| SE_02_020900188 | chr5:122125872-122184499 |
Sample_02_0209 | Lung | MRC-5_MRC5_1DPT | 188 | 11 | 1745 | 42 | 3 | 137 | 470 | ZNF474,LOC728460,LOX |
| SE_02_011000179 | chr5:122140650-122189316 |
Sample_02_0110 | Ovaries | IOE11 | 179 | 6 | 1468 | 50 | 4 | 132 | 419 | ZNF474,LOC728460 |
| SE_02_026500211 | chr5:122140769-122184986 |
Sample_02_0265 | Skeletal muscle | 7250-PAX3-FOXO1 | 211 | 9 | 1331 | 38 | 3 | 125 | 419 | ZNF474,LOC728460 |
| SE_02_005500437 | chr5:122140860-122166027 |
Sample_02_0055 | Lung | IMR-90_Nutlin-3a | 437 | 3 | 741 | 11 | 0 | 84 | 315 | ZNF474,LOC728460 |
| SE_02_026400117 | chr5:122141010-122184307 |
Sample_02_0264 | Skeletal muscle | 7250-empty | 117 | 6 | 1298 | 38 | 3 | 122 | 419 | ZNF474,LOC728460 |
| SE_02_030101103 | chr5:122141099-122184931 |
Sample_02_0301 | Neuroblastoma | GIMEN | 1103 | 5 | 1318 | 38 | 3 | 124 | 419 | ZNF474,LOC728460 |
| SE_02_031700523 | chr5:122141176-122184988 |
Sample_02_0317 | Neuroblastoma | GICAN | 523 | 5 | 1319 | 37 | 3 | 124 | 419 | ZNF474,LOC728460 |
| SE_01_005600179 | chr5:122141203-122184815 |
Sample_01_0056 | Bone | osteoblast | 179 | 5 | 1315 | 37 | 3 | 124 | 419 | ZNF474,LOC728460 |
| SE_02_043000463 | chr5:122141218-122166577 |
Sample_02_0430 | Kidney | 12364284 | 463 | 4 | 748 | 10 | 0 | 83 | 315 | ZNF474,LOC728460 |
| SE_02_026700547 | chr5:122141218-122184823 |
Sample_02_0267 | Kidney | 786-O | 547 | 7 | 1314 | 37 | 3 | 124 | 419 | ZNF474,LOC728460 |
| SE_02_027400905 | chr5:122141244-122184230 |
Sample_02_0274 | Endometriosis | hTERT_KD | 905 | 7 | 1291 | 37 | 3 | 122 | 419 | ZNF474,LOC728460 |
| SE_01_006600668 | chr5:122141258-122164905 |
Sample_01_0066 | Smooth muscle | smooth-muscle-cell | 668 | 4 | 703 | 10 | 0 | 75 | 315 | ZNF474,LOC728460 |
| SE_02_026300378 | chr5:122141456-122184645 |
Sample_02_0263 | Osteoblastic | hFOB_undifferentiated | 378 | 6 | 1303 | 37 | 3 | 123 | 419 | ZNF474,LOC728460 |
| SE_02_001001005 | chr5:122141481-122166569 |
Sample_02_0010 | Kidney | A-498_emptyvector | 1005 | 4 | 747 | 10 | 0 | 83 | 315 | ZNF474,LOC728460 |
| SE_01_001900065 | chr5:122141496-122184491 |
Sample_01_0019 | Brain and spinal cord | astrocyte | 65 | 5 | 1298 | 37 | 3 | 123 | 419 | ZNF474,LOC728460 |
| SE_02_017300523 | chr5:122141626-122183865 |
Sample_02_0173 | Lung | IMR-90_senescent | 523 | 7 | 1275 | 36 | 3 | 122 | 419 | ZNF474,LOC728460 |
| SE_02_008800072 | chr5:122141744-122188353 |
Sample_02_0088 | Umbilical cord | umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_0 | 72 | 9 | 1418 | 48 | 4 | 131 | 419 | ZNF474,LOC728460 |
| SE_02_008900229 | chr5:122141927-122165953 |
Sample_02_0089 | Umbilical cord | umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_3 | 229 | 3 | 712 | 10 | 0 | 83 | 315 | ZNF474,LOC728460 |
| SE_02_039500195 | chr5:122142165-122193205 |
Sample_02_0395 | Mammary gland | BT-549 | 195 | 12 | 1542 | 49 | 4 | 134 | 419 | ZNF474,LOC728460 |
| SE_02_021000530 | chr5:122142423-122166387 |
Sample_02_0210 | Lung | MRC-5_N_1DPT | 530 | 10 | 710 | 10 | 0 | 83 | 315 | ZNF474,LOC728460 |
| SE_02_026100283 | chr5:122143723-122185077 |
Sample_02_0261 | Osteoblastic | hFOB_differentiated | 283 | 5 | 1244 | 36 | 3 | 117 | 419 | ZNF474,LOC728460 |
| SE_02_024300264 | chr5:122149282-122184478 |
Sample_02_0243 | Foreskin | foreskin_HFFs | 264 | 4 | 1055 | 34 | 3 | 101 | 419 | ZNF474,LOC728460 |
| SE_02_009100429 | chr5:122149671-122166507 |
Sample_02_0091 | Umbilical cord | umbilical-cord-derived-mesenchymal-stem-cells_Control_cycle_0 | 429 | 4 | 491 | 7 | 0 | 60 | 315 | ZNF474,LOC728460 |
| SE_01_004500631 | chr5:122179956-122184789 |
Sample_01_0045 | Mammary gland | mammary-epithelial-cell | 631 | 1 | 162 | 10 | 0 | 26 | 63 | LOC728460 |
| SE_02_002101009 | chr5:122180116-122189428 |
Sample_02_0021 | Colon | V429 | 1009 | 2 | 298 | 22 | 1 | 33 | 63 | LOC728460 |
| SE_02_010500650 | chr5:122180196-122185037 |
Sample_02_0105 | Skin | neonatal_keratinocytes | 650 | 1 | 160 | 9 | 0 | 26 | 63 | LOC728460 |
Genomic distribution of SEs associated with LOC728460