Gene overview

Strategies/Algorithm: closest_active Ensembl ID:
Gene: LOC401109 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_025600080 chr3:196079405-196204111 Sample_02_0256 Peripheral blood MV411 80 29 4229 512 32 87 1353 TFRC,ZDHHC19,LOC401109,OSTALPHA
SE_02_034200491 chr3:196092745-196140751 Sample_02_0342 Liver HSPCs_F0 491 11 1587 174 11 22 0 TFRC,LOC401109
SE_02_034500168 chr3:196095951-196141366 Sample_02_0345 Blood AML8 168 6 1523 156 9 21 0 TFRC,LOC401109
SE_00_003100053 chr3:196106349-196166413 Sample_00_0031 Placenta placenta 53 6 2045 211 10 26 584 LOC401109,TFRC,ZDHHC19,SLC51A
SE_02_012400081 chr3:196106645-196193654 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 81 11 2976 337 16 48 584 LOC401109,TFRC,OSTALPHA,ZDHHC19
SE_02_033600194 chr3:196107077-196142029 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 194 3 1220 112 7 18 0 TFRC,LOC401109
SE_01_003900089 chr3:196107920-196146749 Sample_01_0039 Haematopoietic and lymphoid tissue bone marrow K562 89 7 1337 118 6 18 394 LOC401109,TFRC
SE_02_022200176 chr3:196111311-196141965 Sample_02_0222 Blood DU-528 176 2 1042 85 5 18 0 TFRC,LOC401109
SE_02_017600347 chr3:196114299-196136755 Sample_02_0176 Peripheral blood LOUCY 347 3 777 61 4 13 0 TFRC,LOC401109
SE_01_004400468 chr3:196114396-196137118 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 468 4 779 61 4 13 0 TFRC,LOC401109
SE_02_005600934 chr3:196127581-196145187 Sample_02_0056 Mammary gland HMEC 934 6 605 44 1 7 394 LOC401109,TFRC
SE_02_000200406 chr3:196133490-196151454 Sample_02_0002 Mammary gland MCF-7_10Gygamma_2.5h 406 1 603 49 4 6 394 LOC401109
SE_02_007900032 chr3:196133856-196170197 Sample_02_0079 Mammary gland T-47D_1 32 5 1201 139 4 14 584 LOC401109,ZDHHC19,OSTALPHA
SE_02_040300061 chr3:196134068-196173968 Sample_02_0403 Mammary gland T-47D_untreat 61 5 1328 153 4 15 584 LOC401109,ZDHHC19,OSTALPHA
SE_02_039400109 chr3:196134351-196152437 Sample_02_0394 Mammary gland T-47D_2 109 3 600 52 4 6 394 LOC401109
SE_02_010100305 chr3:196140002-196195559 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 305 9 1873 238 10 47 584 LOC401109,ZDHHC19,OSTALPHA
SE_02_014400148 chr3:196140502-196197096 Sample_02_0144 Peripheral blood MV411_DMSO 148 9 1913 241 11 43 584 LOC401109,ZDHHC19,OSTALPHA
SE_02_008100413 chr3:196143786-196195974 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 413 11 1764 230 11 43 370 LOC401109,ZDHHC19,OSTALPHA
SE_02_032000463 chr3:196154238-196203401 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 463 6 1780 244 13 50 776 LOC401109,ZDHHC19,OSTALPHA
SE_02_017600157 chr3:196158149-196197091 Sample_02_0176 Peripheral blood LOUCY 157 3 1324 182 8 43 190 LOC401109,ZDHHC19,OSTALPHA
SE_02_010300316 chr3:196159468-196196093 Sample_02_0103 Peripheral blood Macrophages_GM-CSF_72h_TNF-a_PGE2_Pam3CSK4 316 7 1242 170 8 43 190 LOC401109,ZDHHC19,OSTALPHA
SE_02_033600240 chr3:196159497-196197141 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 240 3 1281 173 8 43 190 LOC401109,ZDHHC19,OSTALPHA
SE_02_035400319 chr3:196159509-196196505 Sample_02_0354 Colon Colo205 319 10 1263 172 8 43 190 LOC401109,ZDHHC19,OSTALPHA
SE_02_043100029 chr3:196159546-196197871 Sample_02_0431 Peripheral blood CD34+HSPC-derived-erythroid-precursors 29 4 1321 179 8 46 331 LOC401109,ZDHHC19,OSTALPHA
SE_01_004300354 chr3:196174352-196197191 Sample_01_0043 Blood KOPT-K1 354 4 773 104 8 34 0 ZDHHC19,LOC401109,OSTALPHA
SE_02_022200313 chr3:196177367-196197245 Sample_02_0222 Blood DU-528 313 1 651 89 8 31 0 ZDHHC19,LOC401109,OSTALPHA
SE_02_011800358 chr3:196178404-196194753 Sample_02_0118 Haematopoietic and lymphoid tissue MINO 358 2 531 67 7 25 0 ZDHHC19,LOC401109,OSTALPHA
SE_02_022100428 chr3:196178490-196195189 Sample_02_0221 Blood CCRF-CEM 428 3 542 69 7 30 0 ZDHHC19,LOC401109,OSTALPHA
SE_00_004500417 chr3:196178581-196194006 Sample_00_0045 Thymus thymus 417 5 507 63 6 22 0 ZDHHC19,LOC401109,OSTALPHA
SE_02_038600115 chr3:196180136-196193062 Sample_02_0386 Lymph node CD19+_B_cells_FL1-2 115 3 436 45 4 18 0 ZDHHC19,LOC401109,OSTALPHA

Genomic distribution of SEs associated with LOC401109

The strength of the tissue affected by the gene


Expression of LOC401109