SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID:
Gene: LOC101927969 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_150000402 chr5:168641402-168661050 Sample_02_1500 Brain KELLY_untreat 402 5 457 39 2 2 0 LOC101927969
SE_02_066000587 chr5:168642819-168659478 Sample_02_0660 Mammary gland MCF10DCIS 587 9 389 34 2 2 0 LOC101927969
SE_02_110700407 chr5:168643809-168684388 Sample_02_1107 Brain SK-N-AS 407 9 1091 96 2 103 1217 SLIT3,LOC101927969
SE_02_066100434 chr5:168645624-168659324 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 434 13 337 32 2 2 0 LOC101927969
SE_02_060300579 chr5:168645699-168659460 Sample_02_0603 Mammary gland MCF10A_p63shRNA_Nutlin3A 579 9 336 32 2 2 0 LOC101927969
SE_02_072500530 chr5:168645906-168659074 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 530 8 329 32 2 2 0 LOC101927969
SE_02_104603291 chr5:168736165-168792330 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 3291 13 1934 77 8 255 1181 MIR218-2,SLIT3,LOC101927969
SE_02_129200266 chr5:168819072-168849416 Sample_02_1292 Lung JHU-LX110-SCLC PDX 266 12 897 7 5 196 155 SLIT3,MIR218-2,LOC101927969
SE_02_049401318 chr5:168842412-168852953 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 1318 5 289 0 0 105 90 SLIT3,MIR218-2,LOC101927969
SE_02_093200244 chr5:168843933-168886834 Sample_02_0932 Embryo H9 WT_1 244 11 1342 2 5 263 154 SLIT3,MIR218-2,LOC101927969
SE_02_131200233 chr5:168875481-168922386 Sample_02_1312 Brain hMGLs_WT 233 19 1403 2 5 280 64 SLIT3,LOC728095,LOC101927969
Genomic distribution of SEs associated with LOC101927969
Genome Browser

The strength of the tissue affected by the gene

Expression of LOC101927969

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)