Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000267659
Gene: LINC01482 Gene type: lncRNA
Strand: + External links:
Genomic region: chr17:68591796-68763882 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_102400097 chr17:68597925-68659216 Sample_02_1024 Prostate PC3 cells 97 22 1460 112 6 124 302 FAM20A,LINC01482
SE_02_056901072 chr17:68675725-68719073 Sample_02_0569 Periodontal ligament mesenchymal stem cell 1072 17 1163 94 6 75 0 LINC01482
SE_02_131100458 chr17:68675989-68711988 Sample_02_1311 Bone marrow HDMSCs 458 8 968 85 6 61 0 LINC01482
SE_02_131000631 chr17:68682878-68711925 Sample_02_1310 Bone marrow ASMSCs 631 9 750 68 6 43 0 LINC01482
SE_02_058600501 chr17:68683617-68719110 Sample_02_0586 Chordal patient-derived chordoma MGH_4 501 11 919 74 6 50 0 LINC01482
SE_02_155200349 chr17:68683780-68734729 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 349 13 1317 85 6 57 0 LINC01482
SE_02_157300582 chr17:68684377-68719928 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 582 13 925 74 6 50 0 LINC01482
SE_02_063600546 chr17:68695515-68712884 Sample_02_0636 Skin BJ5ta 546 6 426 32 3 23 0 LINC01482
SE_02_075501486 chr17:68696027-68702817 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1486 3 183 14 1 5 0 LINC01482
SE_02_075500396 chr17:68724869-68744812 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 396 4 559 12 0 9 0 LINC01482
SE_02_075200502 chr17:68725071-68744606 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 502 5 549 12 0 9 0 LINC01482
SE_02_074500115 chr17:68725143-68738553 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 115 4 367 7 0 9 0 LINC01482
SE_02_056000051 chr17:68730041-68760345 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 51 9 882 29 1 16 0 LINC01482
SE_02_074400049 chr17:68730909-68738569 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 49 4 226 6 0 8 0 LINC01482
SE_02_074601003 chr17:68731468-68738410 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 1003 3 200 6 0 8 0 LINC01482
SE_02_075701203 chr17:68731570-68738317 Sample_02_0757 Embryo ES-derived progenitors_FOXA2 -/- 1203 2 189 6 0 8 0 LINC01482
SE_02_068500729 chr17:68735968-68741514 Sample_02_0685 Lung NCI-H1048_no infection 729 1 165 4 0 0 0 LINC01482
SE_02_061400205 chr17:68749521-68818485 Sample_02_0614 Liposarcoma MLPS_T2 205 19 1937 171 7 46 0 LINC01482
SE_02_157300487 chr17:68749557-68796572 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 487 13 1268 92 3 42 0 LINC01482
SE_02_058600765 chr17:68757226-68818116 Sample_02_0586 Chordal patient-derived chordoma MGH_4 765 13 1714 157 6 45 0 LINC01482
SE_02_127800712 chr17:68758349-68808878 Sample_02_1278 Chordoma UCH1_DMSO_48h 712 11 1401 134 4 44 0 LINC01482
SE_02_155200283 chr17:68758358-68802100 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 283 15 1185 104 3 40 0 LINC01482
SE_02_149300063 chr17:68758532-68796774 Sample_02_1493 Skin SK-MEL-5_DMSO_6h 63 7 1019 78 2 40 0 LINC01482
SE_02_152100086 chr17:68758588-68797259 Sample_02_1521 Skin A375 DMSO 86 8 1035 79 2 40 0 LINC01482
SE_02_075501323 chr17:68758866-68795223 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1323 4 952 71 0 38 0 LINC01482
SE_02_152200317 chr17:68758921-68797002 Sample_02_1522 Skin A375 RTKi 317 9 1018 78 2 40 0 LINC01482
SE_02_090501043 chr17:68759053-68822404 Sample_02_0905 Heart left ventricle_DCM_LV1033 1043 14 1793 167 7 46 0 LINC01482
SE_02_091301072 chr17:68759111-68821501 Sample_02_0913 Heart left ventricle_DCM_LV1304 1072 13 1758 163 6 46 0 LINC01482
SE_02_057100368 chr17:68759171-68796030 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 368 11 975 72 1 40 0 LINC01482
SE_02_088901136 chr17:68759235-68809008 Sample_02_0889 Heart left ventricle_LV1183 1136 10 1385 134 4 44 0 LINC01482
SE_02_090900556 chr17:68759302-68813547 Sample_02_0909 Heart left ventricle_DCM_LV1264 556 12 1515 149 5 44 0 LINC01482
SE_02_057000108 chr17:68759358-68797398 Sample_02_0570 Brain LN229_10_mM_glucose 108 16 1024 79 2 40 0 LINC01482
SE_02_092000824 chr17:68759369-68809557 Sample_02_0920 Heart left ventricle_DCM_LV1535 824 13 1393 134 4 44 0 LINC01482
SE_02_091900874 chr17:68759428-68821990 Sample_02_0919 Heart left ventricle_DCM_LV1532 874 16 1768 165 7 46 0 LINC01482
SE_02_112800525 chr17:68759573-68796893 Sample_02_1128 Adipose visceral adipose_CTL_HCTR10 525 11 997 78 2 40 0 LINC01482
SE_02_112900388 chr17:68759601-68809519 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 388 28 1386 134 4 40 0 LINC01482
SE_02_091800827 chr17:68759633-68809459 Sample_02_0918 Heart left ventricle_DCM_LV1437 827 14 1386 134 4 40 0 LINC01482
SE_02_085800699 chr17:68774121-68796215 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 699 3 584 52 2 33 0 LINC01482

Genomic distribution of SEs associated with LINC01482

The strength of the tissue affected by the gene


Expression of LINC01482