Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000265944 |
| Gene: | LINC01387 | Gene type: | lncRNA |
| Strand: | + | External links: |
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| Genomic region: | chr18:6511416-6590653 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_111500533 | chr18:6537462-6568706 |
Sample_02_1115 | Liver | HepG2 | 533 | 9 | 947 | 49 | 11 | 64 | 0 | LINC01387 |
| SE_02_075600017 | chr18:6540248-6583053 |
Sample_02_0756 | Embryo | ES-derived progenitors_FG FOXA2 -/- | 17 | 10 | 1351 | 58 | 15 | 76 | 50 | LINC01387 |
| SE_02_124600467 | chr18:6540261-6563563 |
Sample_02_1246 | Brain | LAN5_ATRA | 467 | 11 | 709 | 37 | 9 | 50 | 0 | LINC01387 |
| SE_02_063500128 | chr18:6540846-6562319 |
Sample_02_0635 | Synovial sarcoma | HSSYII_Untreated | 128 | 7 | 640 | 32 | 9 | 50 | 0 | LINC01387 |
| SE_02_075500122 | chr18:6543585-6579937 |
Sample_02_0755 | Embryo | ES-derived progenitors_DE FOXA2 -/- | 122 | 7 | 1111 | 55 | 12 | 64 | 50 | LINC01387 |
| SE_02_075200066 | chr18:6551251-6580086 |
Sample_02_0752 | Embryo | ES-derived progenitors_DE_wild type | 66 | 4 | 906 | 40 | 5 | 45 | 50 | LINC01387 |
| SE_02_075700785 | chr18:6556085-6574620 |
Sample_02_0757 | Embryo | ES-derived progenitors_FOXA2 -/- | 785 | 8 | 613 | 30 | 3 | 40 | 0 | LINC01387 |
| SE_02_143500687 | chr18:6556531-6579475 |
Sample_02_1435 | Trophoblast | trophoblast stem cells_MSX2_KD | 687 | 6 | 737 | 33 | 4 | 41 | 50 | LINC01387 |
| SE_02_075600438 | chr18:6595720-6610031 |
Sample_02_0756 | Embryo | ES-derived progenitors_FG FOXA2 -/- | 438 | 3 | 435 | 4 | 1 | 24 | 0 | LINC01387 |
| SE_02_075201202 | chr18:6596859-6614565 |
Sample_02_0752 | Embryo | ES-derived progenitors_DE_wild type | 1202 | 3 | 545 | 7 | 1 | 27 | 0 | LINC01387 |
| SE_02_044500797 | chr18:6604748-6638049 |
Sample_02_0445 | Lung | lung metastasis from primary osteosarcoma tumor M10 | 797 | 9 | 994 | 8 | 2 | 34 | 0 | LINC01387 |
| SE_02_055600742 | chr18:6608446-6615292 |
Sample_02_0556 | iPSCs | BOFS hiPSC cl1 | 742 | 1 | 212 | 4 | 0 | 4 | 0 | LINC01387 |
| SE_02_126200756 | chr18:6624029-6630533 |
Sample_02_1262 | Bone | Im-GCT-3504_G34W | 756 | 2 | 194 | 0 | 0 | 8 | 0 | LINC01387 |
| SE_02_101600389 | chr18:6728148-6760214 |
Sample_02_1016 | Embryo | H9_Mesendoderm_24h | 389 | 10 | 841 | 102 | 2 | 101 | 0 | ARHGAP28,LINC01387 |
| SE_02_055600173 | chr18:6728286-6782308 |
Sample_02_0556 | iPSCs | BOFS hiPSC cl1 | 173 | 11 | 1455 | 148 | 7 | 138 | 0 | ARHGAP28,LINC01387 |
| SE_01_011200480 | chr18:6728670-6744295 |
Sample_01_0112 | Embryonic kidney | HEK293_encode | 480 | 7 | 396 | 56 | 2 | 59 | 0 | ARHGAP28,LINC01387 |
Genomic distribution of SEs associated with LINC01387