SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID:
Gene: LINC00619 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_061400373 chr10:43791583-43845634 Sample_02_0614 Liposarcoma MLPS_T2 373 14 1592 130 8 106 98 LINC00619,LINC00840,HNRNPA3P1
SE_02_091501068 chr10:43808894-43829038 Sample_02_0915 Heart left ventricle_DCM_LV1371 1068 10 560 54 7 55 0 LINC00619,LINC00840,HNRNPA3P1
SE_02_063801125 chr10:43809007-43824195 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 1125 15 437 37 5 44 0 LINC00619,LINC00840,HNRNPA3P1
SE_02_090801437 chr10:43809369-43828415 Sample_02_0908 Heart left ventricle_DCM_LV1262 1437 10 543 54 7 52 0 LINC00619,LINC00840,HNRNPA3P1
SE_02_090901025 chr10:43809411-43828526 Sample_02_0909 Heart left ventricle_DCM_LV1264 1025 11 542 54 7 52 0 LINC00619,LINC00840,HNRNPA3P1
SE_02_091801166 chr10:43809456-43827476 Sample_02_0918 Heart left ventricle_DCM_LV1437 1166 6 523 54 7 49 0 LINC00619,LINC00840,HNRNPA3P1
SE_02_088601443 chr10:43843105-43894224 Sample_02_0886 Skin foreskin_ p63KLF4 1443 10 1509 141 3 163 566 LINC00840,LINC00619,LINC00841
SE_02_114000097 chr10:43855953-43869050 Sample_02_1140 Peripheral nerve MPNST007_PRC2 WT 97 5 386 35 0 56 254 LINC00840,LINC00619,LINC00841
Genomic distribution of SEs associated with LINC00619
Genome Browser

The strength of the tissue affected by the gene

Expression of LINC00619

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)