SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000132434
Gene: LANCL2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:55365448-55433742 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_025100246 chr7:55176930-55214996 Sample_02_0251 Autonomic ganglia SH-SY5Y-MYCN-OFF 246 5 1221 105 5 107 1539 EGFR,LANCL2
SE_02_029800318 chr7:55177244-55219164 Sample_02_0298 Neuroblastoma CLB-GA 318 8 1327 115 5 119 1539 EGFR,LANCL2
SE_02_015500095 chr7:55180992-55205876 Sample_02_0155 Brain U87_EGFRvIII_shSOX9_FBS 95 4 830 75 2 76 915 EGFR,LANCL2
SE_02_031500384 chr7:55187255-55203100 Sample_02_0315 Neuroblastoma TR14 384 2 516 43 1 60 506 EGFR,LANCL2
SE_02_015400036 chr7:55200309-55205605 Sample_02_0154 Brain U87_EGFRvIII_shSCR_FBS 36 2 171 3 0 18 331 EGFR,LANCL2
SE_02_000600261 chr7:55254371-55255747 Sample_02_0006 Cervical cervical-cancer_parental 261 1 35 11 0 0 0 LANCL2
SE_02_119500580 chr7:55297799-55325858 Sample_02_1195 Brain GBM29 580 6 718 81 0 0 0 LANCL2,ELDR
SE_02_021000857 chr7:55325701-55370124 Sample_02_0210 Lung MRC-5_N_1DPT 857 6 1360 174 2 0 260 LANCL2
SE_02_081200050 chr7:55341371-55392087 Sample_02_0812 Head and neck HN120-Pri 50 11 1545 165 1 0 302 LANCL2
SE_02_038000547 chr7:55350845-55367935 Sample_02_0380 Skeletal muscle RH18 547 4 524 46 1 0 260 LANCL2
SE_02_027500610 chr7:55362552-55367602 Sample_02_0275 Retina FW14 610 2 171 19 0 0 260 LANCL2
SE_02_103501228 chr7:55363120-55367828 Sample_02_1035 Mammary gland HCC70_Vehicle 1228 2 160 18 0 0 260 LANCL2
SE_02_103601028 chr7:55363124-55367793 Sample_02_1036 Mammary gland HCC70_XY018 1028 2 160 18 0 0 260 LANCL2
SE_02_020300008 chr7:55363713-55369548 Sample_02_0203 Stomach YCC21 8 1 200 19 0 0 260 LANCL2
SE_01_005000423 chr7:55363787-55368376 Sample_01_0050 Embryo neural-cell 423 1 161 14 0 0 260 LANCL2
SE_02_118800002 chr7:55364160-55367672 Sample_02_1188 Brain GBM18 2 1 135 14 0 0 260 LANCL2
SE_02_027600463 chr7:55364284-55367840 Sample_02_0276 Retina FW15 463 1 134 13 0 0 260 LANCL2
SE_00_001000912 chr7:55364319-55367452 Sample_00_0010 Embryo endodermal-cell 912 1 125 13 0 0 260 LANCL2
SE_02_068400299 chr7:55364321-55367712 Sample_02_0684 Lung DMS79 299 1 130 13 0 0 260 LANCL2
SE_02_119100343 chr7:55364355-55367495 Sample_02_1191 Brain GBM25 343 1 125 13 0 0 260 LANCL2
SE_02_097400118 chr7:55364372-55367812 Sample_02_0974 Brain H3.3K27M-KO_DIPGXIII-C14-nKO-Rx_PARENTAL_cells 118 1 129 13 0 0 260 LANCL2
SE_02_118300001 chr7:55364500-55367682 Sample_02_1183 Brain GBM12 1 1 121 13 0 0 260 LANCL2
SE_02_119200051 chr7:55364503-55367607 Sample_02_1192 Brain GBM26 51 1 120 13 0 0 260 LANCL2
SE_02_068600398 chr7:55364541-55367596 Sample_02_0686 Lung NCI-H128_no infection 398 1 118 12 0 0 260 LANCL2
SE_02_098500082 chr7:55364548-55367715 Sample_02_0985 Brain H3.3K27M-DIPGXIII-C14 82 1 120 12 0 0 260 LANCL2
SE_02_085500006 chr7:55364550-55367664 Sample_02_0855 Glioblastoma Glioblastoma neurosphere cell_HF-2927 6 1 119 12 0 0 260 LANCL2
SE_02_093100545 chr7:55364587-55367465 Sample_02_0931 Embryo H9 UTXKO 545 1 113 12 0 0 260 LANCL2
SE_02_126301547 chr7:55364587-55370657 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1547 3 200 19 0 0 260 LANCL2
SE_01_009500695 chr7:55364663-55367627 Sample_01_0095 Embryo neuroepithelial stem cell stably expressing HES5 originated from H9 695 1 114 12 0 0 260 LANCL2
SE_02_049500879 chr7:55364685-55367484 Sample_02_0495 Islets differentiated hESCs Early LSD1 inhibition PP2 879 1 110 12 0 0 260 LANCL2
SE_02_049300982 chr7:55364719-55367558 Sample_02_0493 Islets differentiated hESCs Early pancreatic progenitor cells 982 1 111 12 0 0 260 LANCL2
SE_02_154000406 chr7:55364738-55367464 Sample_02_1540 Nasopharyngeal HK1 406 1 108 11 0 0 260 LANCL2
SE_02_064000454 chr7:55364847-55370289 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 454 3 180 17 0 0 260 LANCL2
SE_02_049400719 chr7:55364848-55367617 Sample_02_0494 Islets differentiated hESCs Late pancreatic progenitor cells 719 1 106 11 0 0 260 LANCL2
SE_02_064300616 chr7:55364864-55370295 Sample_02_0643 Mammary gland MDA-MB-436 616 4 178 17 0 0 260 LANCL2
SE_02_064600420 chr7:55364866-55367730 Sample_02_0646 Tracheobronchial epithelial HTBE_H1N1_24h 420 1 106 11 0 0 260 LANCL2
SE_02_074600624 chr7:55364909-55367783 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 624 1 107 11 0 0 260 LANCL2
SE_02_064200654 chr7:55364919-55370292 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 654 3 178 17 0 0 260 LANCL2
SE_02_000600130 chr7:55365030-55366988 Sample_02_0006 Cervical cervical-cancer_parental 130 3 84 8 0 0 260 LANCL2
SE_02_143000600 chr7:55365073-55367628 Sample_02_1430 Blood Kasumi-3_mock-infected 600 1 98 8 0 0 260 LANCL2
SE_02_052500710 chr7:55365140-55367629 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 710 1 96 8 0 0 260 LANCL2
SE_02_064400477 chr7:55365146-55367555 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 477 1 93 8 0 0 260 LANCL2
SE_02_065000886 chr7:55365149-55367554 Sample_02_0650 Tracheobronchial epithelial HTBE_H3N2_12h 886 1 93 8 0 0 260 LANCL2
SE_02_136400545 chr7:55365433-55367508 Sample_02_1364 Pancreas pancreatic tumor_associated fibroblasts_triptolide_18h 545 1 82 7 0 0 232 LANCL2
SE_02_128300452 chr7:55406102-55441863 Sample_02_1283 Lung NCI-H2107_p8-15 452 13 1006 90 0 20 513 LANCL2
SE_02_129100352 chr7:55427345-55440901 Sample_02_1291 Lung NCI-H889_p8-15 352 6 410 26 0 7 389 LANCL2
SE_02_118300590 chr7:55427689-55440512 Sample_02_1183 Brain GBM12 590 3 383 24 0 7 389 LANCL2
SE_02_003500085 chr7:55427771-55504894 Sample_02_0035 Peripheral blood CUTLL1_GSI_wash 85 15 2225 305 2 68 984 VOPP1,LANCL2
SE_02_104000563 chr7:55431932-55450333 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 563 13 535 43 0 4 230 LANCL2
SE_02_034800275 chr7:55432306-55504963 Sample_02_0348 Peripheral blood CUTLL1_wild-type 275 6 2102 293 2 65 780 VOPP1,LANCL2
Genomic distribution of SEs associated with LANCL2
Genome Browser

The strength of the tissue affected by the gene

Expression of LANCL2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)