SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000119185
Gene: ITGB1BP1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:9403475-9423528 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_090901254 chr2:9298029-9348237 Sample_02_0909 Heart left ventricle_DCM_LV1264 1254 11 1462 112 5 54 341 ASAP2,ITGB1BP1
SE_02_092100914 chr2:9299487-9347449 Sample_02_0921 Heart embryonic heart_CS22 914 18 1397 108 5 53 341 ASAP2,ITGB1BP1
SE_01_008700734 chr2:9299507-9348731 Sample_01_0087 Thyroid gland thyroid-gland 734 9 1431 108 5 53 341 ASAP2,ITGB1BP1
SE_01_010500650 chr2:9300182-9348465 Sample_01_0105 Thyroid gland thyroid gland_54y 650 12 1404 106 5 52 341 ASAP2,ITGB1BP1
SE_02_061301081 chr2:9307091-9333632 Sample_02_0613 Liposarcoma MLPS_T1 1081 13 789 67 4 34 191 ASAP2,ITGB1BP1
SE_02_111101213 chr2:9307406-9337596 Sample_02_1111 Other HGrC1_SMAD2/3KO 1213 12 885 69 4 40 273 ASAP2,ITGB1BP1
SE_02_077600573 chr2:9331248-9362260 Sample_02_0776 Pancreas EndoC-BH1 573 7 849 36 2 57 329 ASAP2,ITGB1BP1
SE_02_077501374 chr2:9331458-9361915 Sample_02_0775 Pancreas EndoC-BH1_SE 1374 11 836 35 2 57 329 ASAP2,ITGB1BP1
SE_02_104601964 chr2:9352520-9402123 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1964 16 1427 82 2 121 1123 ASAP2,CPSF3,ITGB1BP1
SE_02_042000421 chr2:9353931-9381580 Sample_02_0420 Pectoralis major muscle LHCN-M2_dox_6h 421 6 793 38 2 72 496 ASAP2,CPSF3,ITGB1BP1
SE_02_151000184 chr2:9357373-9417971 Sample_02_1510 Lung H3122_LR_Pano 184 31 1739 122 5 156 1633 ASAP2,ITGB1BP1,CPSF3
SE_02_158300161 chr2:9360428-9464071 Sample_02_1583 Fetal lung IMR90_empty_GM 161 30 2832 258 6 217 2651 ASAP2,CPSF3,ITGB1BP1,IAH1
SE_02_076600241 chr2:9361719-9421501 Sample_02_0766 Ovary PEO1 241 29 1727 132 5 144 1626 ASAP2,ITGB1BP1,CPSF3
SE_02_077000819 chr2:9365133-9401395 Sample_02_0770 Ovary OVCA429_shLuc 819 24 1092 63 2 85 951 ASAP2,CPSF3,ITGB1BP1
SE_02_116800747 chr2:9365202-9401821 Sample_02_1168 Biliary H69_TGF Vehicle_2 747 10 1102 64 2 86 998 ASAP2,CPSF3,ITGB1BP1
SE_02_053000782 chr2:9365240-9403995 Sample_02_0530 Mammary gland MCF10A 782 14 1166 70 3 92 1069 ASAP2,CPSF3,ITGB1BP1
SE_02_048101764 chr2:9365581-9389474 Sample_02_0481 Mammary gland MDA-MB231 1764 7 713 38 2 51 523 ASAP2,CPSF3,ITGB1BP1
SE_02_158401365 chr2:9369946-9389896 Sample_02_1584 Brain U87 GBM_Mock 1365 7 609 30 2 40 462 ASAP2,CPSF3,ITGB1BP1
SE_02_027000558 chr2:9370191-9389037 Sample_02_0270 Kidney PCS-400 558 9 574 28 2 38 462 ASAP2,CPSF3,ITGB1BP1
SE_02_019300234 chr2:9370308-9394330 Sample_02_0193 Kidney Patient_x750N 234 4 711 34 2 65 647 ASAP2,CPSF3,ITGB1BP1
SE_02_039600815 chr2:9370537-9431430 Sample_02_0396 Skin NHEK-D 815 18 1733 144 5 153 2176 ASAP2,CPSF3,ITGB1BP1,IAH1
SE_02_064200839 chr2:9370581-9390642 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 839 8 604 32 2 43 462 ASAP2,CPSF3,ITGB1BP1
SE_02_093801115 chr2:9370600-9387976 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 1115 6 536 24 2 28 365 ASAP2,CPSF3,ITGB1BP1
SE_02_088601066 chr2:9370611-9431519 Sample_02_0886 Skin foreskin_ p63KLF4 1066 14 1733 144 5 153 2176 ASAP2,CPSF3,ITGB1BP1,IAH1
SE_02_064000287 chr2:9370617-9393221 Sample_02_0640 Mammary gland MDA-MB-436_DMSO 287 10 665 33 2 57 531 ASAP2,CPSF3,ITGB1BP1
SE_02_064300704 chr2:9370677-9390061 Sample_02_0643 Mammary gland MDA-MB-436 704 6 583 31 2 40 462 ASAP2,CPSF3,ITGB1BP1
SE_02_080800398 chr2:9370705-9421011 Sample_02_0808 Ovary RMG1_ARID1A KO 398 32 1465 118 5 129 1565 ASAP2,ITGB1BP1,CPSF3
SE_02_143301857 chr2:9370889-9402434 Sample_02_1433 Bone A673 STAG2 null 1857 17 957 59 3 74 937 ASAP2,CPSF3,ITGB1BP1
SE_02_141600511 chr2:9370992-9441997 Sample_02_1416 Brain SF9402 511 11 1970 174 5 176 2372 ASAP2,CPSF3,ITGB1BP1,IAH1
SE_02_077101128 chr2:9371896-9390963 Sample_02_0771 Ovary OVCA429_shGRHL2 1128 14 565 33 2 42 471 ASAP2,CPSF3,ITGB1BP1
SE_02_076700741 chr2:9372075-9400883 Sample_02_0767 Ovary OVCA429 741 22 864 54 2 68 794 ASAP2,CPSF3,ITGB1BP1
SE_02_139800654 chr2:9372772-9395269 Sample_02_1398 Bone U2OS_siNC 654 10 661 36 2 60 647 ASAP2,CPSF3,ITGB1BP1
SE_02_116700736 chr2:9372772-9408711 Sample_02_1167 Biliary H69_TGF Vehicle_1 736 9 1081 73 4 111 1386 ASAP2,ITGB1BP1,CPSF3
SE_02_046501310 chr2:9373255-9408123 Sample_02_0465 Adipose subcutaneous adipocytes 1310 15 1047 71 4 110 1355 ASAP2,ITGB1BP1,CPSF3
SE_01_009200853 chr2:9375665-9404712 Sample_01_0092 Vagina vagina 853 11 868 51 2 71 977 ASAP2,CPSF3,ITGB1BP1
SE_01_008800757 chr2:9376867-9416650 Sample_01_0088 Tibial nerve tibial-nerve 757 5 1174 93 4 112 1421 ASAP2,ITGB1BP1,CPSF3
SE_02_061400621 chr2:9377177-9407947 Sample_02_0614 Liposarcoma MLPS_T2 621 7 921 61 3 100 1196 ASAP2,ITGB1BP1,CPSF3
SE_02_126200795 chr2:9377183-9399795 Sample_02_1262 Bone Im-GCT-3504_G34W 795 7 672 41 1 51 509 ASAP2,CPSF3,ITGB1BP1
SE_02_126800796 chr2:9377194-9387366 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 796 3 317 13 1 13 227 ASAP2,CPSF3,ITGB1BP1
SE_02_111500976 chr2:9377534-9388172 Sample_02_1115 Liver HepG2 976 7 321 12 0 13 228 ASAP2,CPSF3,ITGB1BP1
SE_02_126900871 chr2:9377594-9388239 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 871 3 321 12 0 13 235 ASAP2,CPSF3,ITGB1BP1
SE_02_103602644 chr2:9379738-9417724 Sample_02_1036 Mammary gland HCC70_XY018 2644 14 1111 91 3 103 1278 ASAP2,ITGB1BP1,CPSF3
SE_02_093500546 chr2:9380092-9390468 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 546 6 289 17 0 18 220 ASAP2,CPSF3,ITGB1BP1
SE_02_093700556 chr2:9380207-9390687 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 556 4 294 18 0 21 220 ASAP2,CPSF3,ITGB1BP1
SE_02_049900858 chr2:9403104-9441642 Sample_02_0499 Fetal lung IMR90 IR Senescence 858 16 994 114 2 91 1398 ASAP2,CPSF3,ITGB1BP1,IAH1
SE_02_095200002 chr2:9406164-9406258 Sample_02_0952 Chondrocytes hMSCs differentiated chondrocytes 2 1 4 0 0 0 6 ITGB1BP1,CPSF3
Genomic distribution of SEs associated with ITGB1BP1
Genome Browser

The strength of the tissue affected by the gene

Expression of ITGB1BP1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)