SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000005961
Gene: ITGA2B Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:44372180-44389649 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_098801011 chr17:44384602-44394675 Sample_02_0988 Blood K562_EPZ 1011 5 243 9 1 32 551 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_109900693 chr17:44384705-44394568 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 693 4 239 9 1 32 529 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_109500578 chr17:44385006-44394644 Sample_02_1095 Blood CD34 Erythroid cells_Don002 578 1 233 8 1 31 449 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_057900335 chr17:44386068-44400777 Sample_02_0579 Blood HEL_sgNeg2 335 6 347 13 3 159 1034 ITGA2B,GPATCH8,GRN,FAM171A2
SE_02_058000376 chr17:44386159-44400839 Sample_02_0580 Blood HEL_sgSIK3e4 376 5 348 13 3 158 1017 ITGA2B,GPATCH8,GRN,FAM171A2
SE_02_057600370 chr17:44386412-44400852 Sample_02_0576 Blood HEL_sgLKB1e2 370 7 343 13 3 157 989 ITGA2B,GPATCH8,GRN,FAM171A2
SE_02_082000407 chr17:44387238-44394678 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 407 1 184 6 2 12 126 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_082200374 chr17:44388043-44394755 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 374 1 161 6 2 11 126 ITGA2B,GRN,GPATCH8,FAM171A2
SE_02_082300291 chr17:44388325-44394598 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 291 1 153 5 1 11 126 ITGA2B,GRN,GPATCH8,FAM171A2
Genomic distribution of SEs associated with ITGA2B
Genome Browser

The strength of the tissue affected by the gene

Expression of ITGA2B

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)