SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000162729
Gene: IGSF8 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:160091340-160098943 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_003800057 chr1:160061154-160119766 Sample_00_0038 Spinal cord spinal-cord_108d 57 10 1534 126 4 450 2476 IGSF8,KCNJ9,ATP1A2,KCNJ10,ATP1A4,PIGM
SE_02_104700624 chr1:160078302-160109637 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 624 15 822 71 3 303 2163 IGSF8,KCNJ9,ATP1A2,ATP1A4,KCNJ10,PIGM
SE_02_100400022 chr1:160078432-160102043 Sample_02_1004 Brain Lateral temporal lobe_10T_Old 22 7 606 47 2 267 2163 IGSF8,KCNJ9,ATP1A2,ATP1A4,KCNJ10,PIGM
SE_02_104300854 chr1:160078489-160109795 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 854 19 823 71 3 303 2163 IGSF8,KCNJ9,ATP1A2,ATP1A4,KCNJ10,PIGM
SE_02_108300685 chr1:160083371-160118910 Sample_02_1083 Macula macula 685 8 950 77 4 316 2001 ATP1A2,IGSF8,KCNJ9,KCNJ10,ATP1A4
SE_02_104901129 chr1:160083503-160103309 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 1129 18 497 40 2 234 1880 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_100500100 chr1:160083747-160102380 Sample_02_1005 Brain Lateral temporal lobe_11T_Old 100 10 471 37 2 227 1872 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4,PIGM
SE_02_103502098 chr1:160083802-160101622 Sample_02_1035 Mammary gland HCC70_Vehicle 2098 7 445 35 2 222 1863 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_104801238 chr1:160083850-160103020 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1238 6 482 39 2 234 1849 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_101000072 chr1:160085724-160096698 Sample_02_1010 Brain Lateral temporal lobe_3T_AD 72 4 305 27 2 115 1334 IGSF8,KCNJ9,KCNJ10,ATP1A2
SE_02_053400515 chr1:160085892-160120999 Sample_02_0534 Blood vessel Circle of Willis_60y 515 12 959 77 4 254 1786 ATP1A2,IGSF8,KCNJ9,KCNJ10,ATP1A4
SE_02_101400078 chr1:160085911-160103805 Sample_02_1014 Brain Lateral temporal lobe_7T_AD 78 4 467 37 2 171 1594 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_138400621 chr1:160089726-160121026 Sample_02_1384 Other induced pluripotent stem cell derived Neuronal progenitor cell 621 10 863 71 2 225 1327 ATP1A2,IGSF8,KCNJ9,KCNJ10,ATP1A4
SE_02_120500433 chr1:160090518-160105014 Sample_02_1205 Brain NB3 433 1 387 30 0 147 1129 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_117300387 chr1:160090664-160100451 Sample_02_1173 Brain GBM01 387 1 262 21 0 120 1129 IGSF8,KCNJ10,ATP1A2,KCNJ9
SE_02_120300340 chr1:160090686-160105970 Sample_02_1203 Brain NB1 340 1 411 32 0 151 1129 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_121300392 chr1:160090983-160104966 Sample_02_1213 Brain GBM31 392 1 377 29 0 146 1129 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_121100236 chr1:160092161-160119078 Sample_02_1211 Brain GBM21 236 10 751 58 2 205 1017 ATP1A2,IGSF8,KCNJ9,KCNJ10,ATP1A4
SE_02_100100053 chr1:160092188-160101791 Sample_02_1001 Brain Lateral temporal lobe_17T_Young 53 4 258 16 0 115 893 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_100300063 chr1:160092198-160103073 Sample_02_1003 Brain Lateral temporal lobe_19T_Young 63 5 291 20 0 123 889 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4,CASQ1,TAGLN2,PEA15,PIGM
SE_02_018500799 chr1:160092621-160103780 Sample_02_0185 Skin UACC257 799 4 288 19 0 117 787 IGSF8,ATP1A2,KCNJ9,ATP1A4,KCNJ10
SE_02_018400584 chr1:160092899-160102247 Sample_02_0184 Skin SKMEL30 584 2 244 16 0 105 726 IGSF8,ATP1A2,KCNJ9,ATP1A4,KCNJ10
SE_02_001700414 chr1:160093361-160118541 Sample_02_0017 Embryo H9_ESC 414 6 686 54 2 185 728 IGSF8,ATP1A2,KCNJ9,ATP1A4,KCNJ10
SE_02_120400432 chr1:160093611-160105015 Sample_02_1204 Brain NB2 432 1 287 20 0 110 564 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_067900096 chr1:160094903-160117989 Sample_02_0679 Embryo H1 hESC-derived neural progenitor cells_Smad_24hr 96 6 629 49 2 160 485 ATP1A2,IGSF8,KCNJ9,KCNJ10,ATP1A4
SE_02_121000371 chr1:160095141-160118687 Sample_02_1210 Brain GBM17 371 7 640 49 2 156 442 ATP1A2,IGSF8,KCNJ9,KCNJ10,ATP1A4
SE_02_118100733 chr1:160095334-160105760 Sample_02_1181 Brain GBM10 733 1 260 16 0 81 275 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
SE_02_055900819 chr1:160095437-160118395 Sample_02_0559 iPSCs FX52 iPSCs dC-T 819 6 625 49 2 152 381 ATP1A2,IGSF8,KCNJ9,KCNJ10,ATP1A4
SE_02_067700225 chr1:160095547-160117851 Sample_02_0677 Embryo H1 hESC-derived neural progenitor cells_Smad_6hr 225 4 608 48 2 144 381 ATP1A2,IGSF8,KCNJ9,KCNJ10,ATP1A4
SE_02_108200767 chr1:160095570-160103572 Sample_02_1082 Retina retina 767 1 190 11 0 71 260 IGSF8,KCNJ9,KCNJ10,ATP1A2,ATP1A4
Genomic distribution of SEs associated with IGSF8
Genome Browser

The strength of the tissue affected by the gene

Expression of IGSF8

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)