SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000108622
Gene: ICAM2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr17:64002594-64020634 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_00_004000254 chr17:63980027-64026415 Sample_00_0040 Spleen spleen_30y 254 13 1306 58 1 105 1696 C17ORF72,ICAM2,CD79B,SCN4A
SE_01_008400223 chr17:63980029-64122688 Sample_01_0084 Spleen spleen 223 24 3973 237 7 394 3816 C17ORF72,ERN1,ICAM2,SNORA76,SCN4A,CD79B,SNORD104
SE_00_000300989 chr17:63982963-64026459 Sample_00_0003 Adrenal gland adrenal-gland_97d 989 7 1239 51 1 94 1696 C17ORF72,ICAM2,SCN4A
SE_00_003900495 chr17:63984488-64026409 Sample_00_0039 Spleen spleen_3y 495 7 1194 49 1 90 1696 C17ORF72,ICAM2,SCN4A
SE_02_012800050 chr17:63984719-64128221 Sample_02_0128 Haematopoietic and lymphoid tissue ALL-SIL 50 49 4023 243 8 391 3816 C17ORF72,ERN1,ICAM2,SNORA76,SCN4A,SNORD104
SE_02_002400162 chr17:63985456-64026437 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 162 14 1168 49 1 87 1696 C17ORF72,ICAM2,SCN4A
SE_00_000800250 chr17:63997137-64026555 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 250 3 835 29 0 46 1696 C17ORF72,ICAM2,SCN4A
SE_00_000700215 chr17:63997584-64026599 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 215 3 828 29 0 44 1696 C17ORF72,ICAM2,SCN4A
SE_02_090401552 chr17:64000344-64025826 Sample_02_0904 Heart left ventricle_DCM_LV1028 1552 13 716 24 0 36 1374 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_147100524 chr17:64000437-64025804 Sample_02_1471 Blood Outgrowth Endothelia BOEC 524 10 712 24 0 36 1374 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_002700319 chr17:64000630-64026279 Sample_02_0027 Umbilical vein HUVEC_VEGF_4h 319 4 715 24 0 36 1374 C17ORF72,ICAM2,SCN4A
SE_02_130800373 chr17:64000739-64024667 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 373 8 661 23 0 36 1374 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_095001464 chr17:64000879-64006799 Sample_02_0950 Umbilical vein HUVEC_WT 1464 1 207 6 0 20 1107 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_089601247 chr17:64000931-64025912 Sample_02_0896 Heart left ventricle_LV1294 1247 14 690 24 0 36 1361 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_088700863 chr17:64000933-64025857 Sample_02_0887 Heart left ventricle_LV1121 863 10 687 24 0 36 1361 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_089000796 chr17:64000934-64025792 Sample_02_0890 Heart left ventricle_LV1200 796 9 684 24 0 36 1361 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_090001112 chr17:64000966-64025489 Sample_02_0900 Heart left ventricle_LV1452 1112 10 667 23 0 36 1356 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_083200246 chr17:64000987-64025845 Sample_02_0832 Umblical vein HUVECs_TNF30min 246 19 686 24 0 36 1350 PRR29,ICAM2,SCN4A,PRR29-AS1,STRADA,CD79B
SE_02_089900748 chr17:64000993-64024900 Sample_02_0899 Heart left ventricle_LV1400 748 10 650 23 0 36 1348 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_091900912 chr17:64001007-64025731 Sample_02_0919 Heart left ventricle_DCM_LV1532 912 9 682 24 0 36 1344 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_090600946 chr17:64001051-64025969 Sample_02_0906 Heart left ventricle_DCM_LV1072 946 11 686 24 0 36 1340 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_00_005500643 chr17:64001081-64026371 Sample_00_0055 Spleen spleen 34y 643 12 693 24 0 33 1329 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_091800904 chr17:64001084-64025648 Sample_02_0918 Heart left ventricle_DCM_LV1437 904 6 674 24 0 33 1328 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_151800156 chr17:64001102-64025726 Sample_02_1518 Umbilical vein HUVEC_Scr 156 11 679 24 0 33 1323 PRR29,ICAM2,SCN4A,PRR29-AS1,STRADA,CD79B
SE_02_091600620 chr17:64001146-64025759 Sample_02_0916 Heart left ventricle_DCM_LV1392 620 15 678 24 0 33 1314 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_091101188 chr17:64001209-64025694 Sample_02_0911 Heart left ventricle_DCM_LV1290 1188 7 674 24 0 33 1299 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_091500842 chr17:64001251-64025229 Sample_02_0915 Heart left ventricle_DCM_LV1371 842 10 653 23 0 33 1285 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_092000734 chr17:64001359-64025758 Sample_02_0920 Heart left ventricle_DCM_LV1535 734 9 673 24 0 33 1259 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_058500215 chr17:64001537-64025799 Sample_02_0585 Umbilical vein HUVEC 0hour 215 11 667 24 0 32 1204 PRR29,ICAM2,SCN4A,PRR29-AS1,STRADA,CD79B
SE_02_112900718 chr17:64001547-64025616 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 718 9 661 24 0 32 1201 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_130900980 chr17:64001550-64024617 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 980 4 632 23 0 32 1200 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_152000198 chr17:64001759-64025689 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 198 10 660 24 0 31 1149 PRR29,ICAM2,SCN4A,PRR29-AS1,STRADA,CD79B
SE_02_062000971 chr17:64002047-64017974 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 971 7 463 16 0 25 971 PRR29,ICAM2,SCN4A,PRR29-AS1
SE_02_151900556 chr17:64004603-64008399 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 556 1 120 4 0 9 420 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_109700239 chr17:64004605-64026351 Sample_02_1097 Haematopoietic and lymphoid tissue 697 239 9 571 20 0 19 525 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_036300223 chr17:64004634-64026636 Sample_02_0363 Haematopoietic and lymphoid tissue 697 223 3 578 21 0 19 516 ICAM2,SCN4A,C17ORF72
SE_02_109500396 chr17:64004703-64025837 Sample_02_1095 Blood CD34 Erythroid cells_Don002 396 5 557 20 0 19 502 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_033600428 chr17:64005354-64026238 Sample_02_0336 Haematopoietic and lymphoid tissue SET2 428 3 544 20 0 18 385 ICAM2,SCN4A,C17ORF72
SE_01_002600722 chr17:64005492-64026035 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 722 4 529 20 0 18 352 ICAM2,SCN4A,C17ORF72
SE_02_061700367 chr17:64006020-64026384 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 367 2 519 19 0 18 335 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_022600183 chr17:64006806-64029409 Sample_02_0226 Blood KOPTK1 183 2 568 24 0 16 264 ICAM2,SCN4A,C17ORF72
SE_02_023401020 chr17:64007783-64026577 Sample_02_0234 Tonsil Th17 1020 3 473 18 0 12 148 ICAM2,SCN4A,C17ORF72
SE_02_045400736 chr17:64008560-64028552 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 736 8 497 22 0 10 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_01_004400670 chr17:64008561-64028317 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 670 3 493 21 0 10 105 ICAM2,SCN4A,C17ORF72
SE_02_082300367 chr17:64008732-64025778 Sample_02_0823 Haematopoietic and lymphoid tissue SET-2_insR_GSK-LSD1 367 5 425 15 0 8 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_130400772 chr17:64008849-64028822 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 772 6 497 21 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_143100773 chr17:64009345-64025937 Sample_02_1431 Blood T cell 773 3 411 14 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_111200841 chr17:64009642-64026069 Sample_02_1112 T lymphocyte THP-6 T-ALL 841 5 409 13 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_048300139 chr17:64009817-64025855 Sample_02_0483 Bone marrow HSCe_22y_CD34+,CD38-,Lineage- 139 5 400 13 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_104400392 chr17:64010014-64027490 Sample_02_1044 Peripheral blood CD4+ cells_CTCL409 392 6 434 15 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_109600597 chr17:64011604-64025803 Sample_02_1096 Blood CD34 Erythroid cells_Don003 597 2 341 12 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_075800599 chr17:64012999-64025838 Sample_02_0758 Peripheral blood REH 599 5 305 11 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_017600800 chr17:64013047-64029356 Sample_02_0176 Peripheral blood LOUCY 800 1 385 17 0 7 105 ICAM2,SCN4A,C17ORF72
SE_00_000900267 chr17:64013140-64026463 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 267 3 309 11 0 7 105 ICAM2,SCN4A,C17ORF72
SE_02_022200470 chr17:64013311-64026593 Sample_02_0222 Blood DU-528 470 1 311 12 0 7 105 ICAM2,SCN4A,C17ORF72
SE_00_004400306 chr17:64013319-64026507 Sample_00_0044 Cord blood T-cell 306 1 308 12 0 7 105 ICAM2,SCN4A,C17ORF72
SE_00_002700182 chr17:64013741-64026644 Sample_00_0027 Blood natural-killer-cell 182 3 302 11 0 7 105 ICAM2,SCN4A,C17ORF72
SE_00_004700142 chr17:64013838-64026296 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 142 6 291 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_082000568 chr17:64014080-64025849 Sample_02_0820 Haematopoietic and lymphoid tissue SET-2_WT_DMSO 568 3 278 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_078201033 chr17:64014155-64026345 Sample_02_0782 Blood MEC1 1033 4 283 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_082200304 chr17:64014163-64025848 Sample_02_0822 Haematopoietic and lymphoid tissue SET-2_insR_DMSO 304 2 273 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_059100324 chr17:64014172-64026380 Sample_02_0591 PBMCs adult CD4+CD25-CD45RA+CD27+ naive T cells 324 6 282 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_014800248 chr17:64014180-64026326 Sample_02_0148 Blood CD8_T_cells 248 3 282 10 0 7 105 ICAM2,SCN4A,C17ORF72
SE_01_004300275 chr17:64014243-64028236 Sample_01_0043 Blood KOPT-K1 275 1 328 15 0 7 105 ICAM2,SCN4A,C17ORF72
SE_02_139300668 chr17:64014342-64025814 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 668 4 269 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_036200431 chr17:64014393-64023743 Sample_02_0362 Haematopoietic and lymphoid tissue REH 431 1 210 9 0 7 105 ICAM2,SCN4A,C17ORF72
SE_02_084200250 chr17:64014418-64025360 Sample_02_0842 Umbilical cord blood HSPC-derived early erythroid progenitors 250 5 241 9 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_143000370 chr17:64014450-64025884 Sample_02_1430 Blood Kasumi-3_mock-infected 370 5 264 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_045700741 chr17:64014463-64026318 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 741 7 274 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_048400241 chr17:64014526-64025764 Sample_02_0484 Bone marrow HSCe_23y_CD34+,CD38-,Lineage- 241 6 257 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_048600132 chr17:64014576-64025607 Sample_02_0486 Bone marrow HSCe_66y_CD34+,CD38-,Lineage- 132 2 248 9 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_048200099 chr17:64014577-64025949 Sample_02_0482 Bone marrow HSCe_18y_CD34+,CD38-,Lineage-_ 99 5 262 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_155600657 chr17:64014722-64038282 Sample_02_1556 Gastrointestinal Stromal GIST-5_KIT e9 657 4 589 31 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_059300618 chr17:64014734-64025827 Sample_02_0593 Fetal spleenocytes fetal naive T cells 618 3 251 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_059200291 chr17:64014740-64026338 Sample_02_0592 PBMCs adult CD4+CD25hiCD127lo regulatory T cells 291 4 261 10 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_005800583 chr17:64014743-64026547 Sample_02_0058 Haematopoietic and lymphoid tissue blood WT/Jurkat-11bp 583 2 266 11 0 7 105 ICAM2,SCN4A,C17ORF72
SE_02_122400049 chr17:64014757-64132949 Sample_02_1224 Bone marrow normal plasma cell 49 67 3183 211 7 356 2396 ERN1,ICAM2,SNHG25,SNORA76C,PRR29-AS1,PRR29,SCN4A,SNORD104
SE_02_002500617 chr17:64014762-64026392 Sample_02_0025 Blood CD19donorA 617 8 261 10 0 7 105 ICAM2,SCN4A,C17ORF72
SE_02_002600217 chr17:64014765-64026490 Sample_02_0026 Blood CD4donorE 217 8 263 11 0 7 105 ICAM2,SCN4A,C17ORF72
SE_02_002300373 chr17:64016216-64026372 Sample_02_0023 Blood CD8donorC 373 9 238 8 0 7 105 ICAM2,SCN4A,C17ORF72
SE_02_104200537 chr17:64016293-64026478 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 537 9 238 9 0 7 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_048900244 chr17:64018151-64025847 Sample_02_0489 Bone marrow HSCe_23y_F_CD34+,CD38-,Lineage- 244 4 186 7 0 6 105 ICAM2,PRR29,SCN4A,PRR29-AS1
SE_02_104602747 chr17:64030815-64076959 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2747 16 1325 94 4 169 1966 ERN1,PRR29,ICAM2,PRR29-AS1
SE_02_104200225 chr17:64049137-64088329 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 225 18 1106 92 4 148 1149 ERN1,ICAM2,PRR29-AS1
SE_02_045500217 chr17:64050310-64095970 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 217 14 1278 97 4 156 1120 ERN1,ICAM2,SNHG25
SE_02_045700265 chr17:64050838-64093969 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 265 14 1210 96 4 152 1120 ERN1,ICAM2
SE_01_005400470 chr17:64055537-64093672 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 470 4 1063 87 4 124 803 ERN1,ICAM2
SE_02_093001260 chr17:64056651-64089244 Sample_02_0930 Mid-gestation placenta trophoblast__SynT 1260 19 912 77 3 117 705 ERN1,ICAM2
SE_02_092901027 chr17:64056682-64089770 Sample_02_0929 Mid-gestation placenta trophoblast__CytT 1027 21 927 77 3 117 705 ERN1,ICAM2
SE_00_000600838 chr17:64060490-64078525 Sample_00_0006 Blood CD14-positive-monocyte 838 3 500 34 2 75 477 ERN1,ICAM2
SE_02_080800736 chr17:64069664-64077463 Sample_02_0808 Ovary RMG1_ARID1A KO 736 1 212 13 0 41 118 ERN1,ICAM2
Genomic distribution of SEs associated with ICAM2
Genome Browser

The strength of the tissue affected by the gene

Expression of ICAM2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)