SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000104812
Gene: GYS1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr19:48968130-48993310 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_090301235 chr19:48967275-48994429 Sample_02_0903 Heart left ventricle_DCM_LV1009 1235 8 870 34 2 103 1944 GYS1,RUVBL2,CGB2,DHDH,LHB,NUCB1-AS1,CGB5,CGB1,MIR6798,CGB,FTL,SNAR-G1,BAX,LOC101059948,SNAR-G2
SE_01_007600716 chr19:48969915-48995210 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 716 1 807 32 2 90 1516 RUVBL2,GYS1,SNAR-G1,BAX,FTL,CGB2,SNAR-G2,CGB,DHDH,LHB,CGB5,CGB1
SE_01_009400579 chr19:48974316-48994783 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 579 1 646 27 2 80 1280 GYS1,RUVBL2,CGB2,DHDH,LHB,BAX,CGB5,CGB1,MIR6798,CGB,FTL,SNAR-G1,LOC101059948,SNAR-G2
SE_02_036700118 chr19:48975165-48995010 Sample_02_0367 Skeletal muscle NS129 118 1 621 25 2 74 1163 RUVBL2,GYS1,SNAR-G1,BAX,FTL,CGB2,SNAR-G2,CGB,DHDH,LHB,CGB5,CGB1
SE_01_011500871 chr19:48977836-48993259 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 871 4 488 15 1 60 906 GYS1,CGB2,DHDH,LHB,BAX,CGB1,MIR6798,CGB,FTL,RUVBL2,SNAR-G1,LOC101059948,SNAR-G2,PPP1R15A,TULP2,NUCB1,KCNA7,TRPM4,CGB7,NTF4,HRC
SE_02_036800371 chr19:48984568-48994744 Sample_02_0368 Skeletal muscle NS134 371 1 312 16 1 55 735 RUVBL2,GYS1,SNAR-G1,BAX,FTL,CGB2,SNAR-G2,CGB,LHB,CGB5,CGB1
SE_02_037200657 chr19:48988734-48994773 Sample_02_0372 Skeletal muscle RMS008 657 1 174 13 1 33 433 RUVBL2,GYS1,SNAR-G1,BAX,FTL,CGB2,SNAR-G2,CGB,LHB,CGB5,CGB1
Genomic distribution of SEs associated with GYS1
Genome Browser

The strength of the tissue affected by the gene

Expression of GYS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)