Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000180613 |
| Gene: | GSX2 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr4:54099523-54102498 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_050000496 | chr4:54060746-54104117 |
Sample_02_0500 | Fetal lung | IMR90_#2 | 496 | 21 | 1072 | 53 | 6 | 244 | 633 | GSX2,CHIC2 |
| SE_02_116600661 | chr4:54062060-54104284 |
Sample_02_1166 | Biliary | H69_TGF beta_16h_1 | 661 | 14 | 1044 | 53 | 6 | 242 | 633 | GSX2,CHIC2 |
| SE_02_155200912 | chr4:54062435-54104376 |
Sample_02_1552 | HMSCs | hMSC ATCC SCRC-4000 | 912 | 14 | 1035 | 53 | 6 | 242 | 633 | GSX2,CHIC2 |
| SE_02_086700439 | chr4:54062556-54104311 |
Sample_02_0867 | Bone marrow | Bone marrow derived hMSC_d0 | 439 | 30 | 1030 | 53 | 6 | 242 | 633 | GSX2,CHIC2 |
| SE_02_116900718 | chr4:54062933-54104279 |
Sample_02_1169 | Biliary | H69_TGF beta_16h_2 | 718 | 14 | 1023 | 53 | 6 | 239 | 633 | GSX2,CHIC2 |
| SE_02_116800603 | chr4:54062952-54104273 |
Sample_02_1168 | Biliary | H69_TGF Vehicle_2 | 603 | 16 | 1023 | 53 | 6 | 239 | 633 | GSX2,CHIC2 |
| SE_02_116700613 | chr4:54063142-54104350 |
Sample_02_1167 | Biliary | H69_TGF Vehicle_1 | 613 | 11 | 1023 | 53 | 6 | 234 | 633 | GSX2,CHIC2 |
| SE_02_093500158 | chr4:54066508-54104042 |
Sample_02_0935 | Retinal Pigmented Epithelial | RPE188_Con | 158 | 8 | 941 | 51 | 6 | 193 | 433 | GSX2,CHIC2 |
| SE_02_095300031 | chr4:54081772-54108800 |
Sample_02_0953 | Brain | H3.3K27M_1840 | 31 | 9 | 674 | 38 | 4 | 232 | 433 | GSX2,CHIC2 |
| SE_02_118800041 | chr4:54081973-54110505 |
Sample_02_1188 | Brain | GBM18 | 41 | 9 | 710 | 40 | 5 | 271 | 433 | GSX2,CHIC2 |
| SE_02_117800003 | chr4:54084620-54108864 |
Sample_02_1178 | Brain | GBM07 | 3 | 5 | 605 | 36 | 4 | 230 | 433 | GSX2,CHIC2 |
| SE_02_096400034 | chr4:54084977-54110202 |
Sample_02_0964 | Brain | H3.3K27M_HSJ019-Tumor-Rx_brain | 34 | 4 | 629 | 37 | 5 | 266 | 433 | GSX2,CHIC2 |
| SE_02_095800043 | chr4:54085389-54110324 |
Sample_02_0958 | Brain | H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft | 43 | 4 | 624 | 38 | 5 | 266 | 433 | GSX2,CHIC2 |
| SE_02_097000369 | chr4:54085402-54110212 |
Sample_02_0970 | Brain | H3.3K27M_XHSJ019-X1-1-Rx_xenograft | 369 | 5 | 619 | 37 | 5 | 266 | 433 | GSX2,CHIC2 |
| SE_02_105300173 | chr4:54090928-54106272 |
Sample_02_1053 | Esophagus | OACM5.1 | 173 | 1 | 384 | 21 | 3 | 176 | 433 | GSX2,CHIC2 |
| SE_02_121000069 | chr4:54091125-54110052 |
Sample_02_1210 | Brain | GBM17 | 69 | 7 | 452 | 24 | 3 | 260 | 433 | GSX2,CHIC2 |
| SE_02_093300301 | chr4:54094434-54110184 |
Sample_02_0933 | Embryo | H7 UTXKO | 301 | 5 | 366 | 19 | 3 | 250 | 433 | GSX2,CHIC2 |
| SE_02_093100435 | chr4:54094536-54110452 |
Sample_02_0931 | Embryo | H9 UTXKO | 435 | 3 | 372 | 20 | 3 | 250 | 433 | GSX2,CHIC2 |
| SE_02_113400435 | chr4:54151713-54169117 |
Sample_02_1134 | Bone | U2OS-interphase | 435 | 5 | 485 | 24 | 0 | 0 | 0 | GSX2 |
| SE_02_111300847 | chr4:54151927-54169843 |
Sample_02_1113 | Bone | U2OS | 847 | 6 | 500 | 24 | 0 | 0 | 0 | GSX2 |
| SE_02_055400078 | chr4:54152802-54173693 |
Sample_02_0554 | Other | Aska shSSX | 78 | 6 | 598 | 34 | 0 | 1 | 0 | GSX2 |
Genomic distribution of SEs associated with GSX2