SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000158292
Gene: GPR153 Gene type: protein_coding
Strand: - External links:
Genomic region: chr1:6247353-6261098 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_095800398 chr1:6239250-6277420 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 398 8 1209 69 1 252 2187 GPR153,LINC00337,HES3,ACOT7,RNF207,ICMT,RPL22,LOC102724450
SE_02_027500198 chr1:6241361-6292533 Sample_02_0275 Retina FW14 198 7 1628 102 2 237 2325 HES3,ACOT7,GPR153,RNF207,ICMT,RPL22
SE_02_085900050 chr1:6245566-6355526 Sample_02_0859 Prostate PC3 50 22 3520 283 3 251 2540 GPR153,HES3,ACOT7,RNF207,ICMT,RPL22,LOC102724450,LINC00337,PLEKHG5
SE_02_125400053 chr1:6246219-6354570 Sample_02_1254 Bladder Bladder tumor Basal1 53 28 3478 282 3 242 2476 GPR153,ACOT7,RNF207,ICMT,RPL22,LOC102724450,LINC00337,HES3
SE_02_021600663 chr1:6247666-6268860 Sample_02_0216 Skin NHEK_scramble 663 5 665 44 1 154 1597 GPR153,ACOT7,RNF207,ICMT,RPL22,HES3
SE_01_011500103 chr1:6248755-6355082 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 103 26 3409 277 3 231 2124 GPR153,ACOT7,RNF207,ICMT,RPL22,LOC102724450,LINC00337,HES3,PLEKHG5
SE_02_155300911 chr1:6248823-6277249 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 911 11 960 53 1 161 1329 GPR153,ACOT7,RNF207,ICMT,RPL22,LOC102724450,LINC00337,HES3
SE_02_061100594 chr1:6249473-6300407 Sample_02_0611 Liposarcoma DDLPS_T1 594 20 1633 113 2 171 1433 GPR153,ACOT7,RNF207,ICMT,RPL22,LOC102724450,LINC00337,HES3
SE_02_035900217 chr1:6256095-6292331 Sample_02_0359 Colon Colo741 217 3 1175 83 1 75 544 GPR153,ACOT7,RNF207,ICMT,HES3
SE_01_007900840 chr1:6258220-6283736 Sample_01_0079 Peyers patch Peyers-patch 840 4 881 48 0 73 544 GPR153,ACOT7,ICMT,HES3
SE_02_036900484 chr1:6259400-6277410 Sample_02_0369 Skeletal muscle RD 484 3 623 30 0 63 346 GPR153,ACOT7,ICMT,HES3
SE_02_037900484 chr1:6259400-6277410 Sample_02_0379 Skeletal muscle RD-Fusion-Negative-Rhabdomyosarcoma 484 3 623 30 0 63 346 GPR153,ACOT7,ICMT,HES3
SE_02_097100874 chr1:6259659-6277112 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 874 6 611 30 0 63 346 GPR153,ACOT7,ICMT,LINC00337,HES3
SE_02_044600451 chr1:6259701-6332101 Sample_02_0446 Bone osteosarcoma tumor P2 451 18 2320 196 1 98 801 GPR153,ACOT7,ICMT,LINC00337,HES3
SE_02_079800072 chr1:6260259-6277604 Sample_02_0798 Brain 1919 72 6 606 28 0 56 346 GPR153,ACOT7,ICMT,LINC00337,HES3
SE_00_004300793 chr1:6260280-6292241 Sample_00_0043 Stomach stomach_96d 793 5 1062 66 1 67 544 GPR153,ACOT7,ICMT,HES3
SE_01_002100724 chr1:6260318-6277486 Sample_01_0021 Skin bipolar-neuron 724 3 599 28 0 56 346 GPR153,ACOT7,ICMT,HES3
SE_02_043900079 chr1:6260391-6332117 Sample_02_0439 Bone Hu09 79 20 2299 194 1 91 801 GPR153,ACOT7,ICMT,LINC00337,HES3
SE_02_036400523 chr1:6261098-6277573 Sample_02_0364 Skeletal muscle CTR 523 2 587 25 0 39 182 ACOT7,ICMT,HES3,GPR153
SE_02_037500097 chr1:6261146-6300605 Sample_02_0375 Skeletal muscle RMS216 97 9 1280 85 1 55 452 ACOT7,ICMT,HES3,GPR153
SE_00_001001076 chr1:6261154-6277184 Sample_00_0010 Embryo endodermal-cell 1076 4 571 24 0 39 170 ACOT7,ICMT,HES3,GPR153
SE_02_106100704 chr1:6261169-6277026 Sample_02_1061 Bone TC71_WT 704 4 567 24 0 39 170 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_148800703 chr1:6261169-6277026 Sample_02_1488 Bone TC-71 703 4 567 24 0 39 170 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_074100051 chr1:6261205-6330990 Sample_02_0741 Muscle RH30 51 15 2236 184 1 74 625 ACOT7,ICMT,GPR153,LINC00337,HES3
SE_02_148500525 chr1:6261854-6277588 Sample_02_1485 Bone SK-ES-1 525 3 570 24 0 38 170 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_108000809 chr1:6261925-6276939 Sample_02_1080 Muscle JR1 shCtrl 809 8 547 24 0 38 170 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_044500949 chr1:6261936-6332246 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 949 29 2268 190 1 73 625 ACOT7,ICMT,GPR153,LINC00337,HES3
SE_02_021101369 chr1:6262119-6277124 Sample_02_0211 Lung MRC-5_NFD_1DPT 1369 3 552 24 0 38 170 ACOT7,ICMT,HES3,GPR153
SE_02_044100761 chr1:6262224-6288822 Sample_02_0441 Bone M112 761 9 915 49 1 49 368 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_155900716 chr1:6262288-6292039 Sample_02_1559 Gastrointestinal Stromal GIST-8_PDGFRA e18 716 13 1014 62 1 49 368 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_066300689 chr1:6262603-6277547 Sample_02_0663 Thyroid TT 689 2 553 22 0 33 170 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_097000382 chr1:6262665-6303793 Sample_02_0970 Brain H3.3K27M_XHSJ019-X1-1-Rx_xenograft 382 13 1354 94 1 60 448 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_143201509 chr1:6262679-6307269 Sample_02_1432 Bone A673 STAG2 WT 1509 24 1459 99 1 60 448 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_114200380 chr1:6262889-6281216 Sample_02_1142 Peripheral nerve MPNST642_PRC2 mutant 380 9 688 28 0 36 241 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_042300424 chr1:6263331-6280851 Sample_02_0423 Skin A375 424 4 663 27 0 31 170 ACOT7,ICMT,HES3,GPR153
SE_02_114500897 chr1:6263765-6281823 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 897 11 690 27 0 36 289 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_069000081 chr1:6264901-6277033 Sample_02_0690 Lung NCI-H510A_no infection 81 6 473 18 0 18 0 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_123800110 chr1:6265743-6280500 Sample_02_1238 Skin MS1_virus_positive 110 4 569 17 0 18 0 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_110500275 chr1:6265981-6278042 Sample_02_1105 Brain NBL-S 275 1 467 12 0 17 0 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_01_005800017 chr1:6266463-6351195 Sample_01_0058 Prostate PC-3 17 9 2747 228 2 83 786 ACOT7,GPR153,ICMT,HES3
SE_02_142000094 chr1:6266485-6280677 Sample_02_1420 Brain DIPG007 94 4 555 18 0 16 0 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_006800285 chr1:6266567-6275123 Sample_02_0068 Skin A375_DMSO 285 2 328 8 0 14 0 ACOT7,ICMT,HES3,GPR153
SE_02_124200098 chr1:6267396-6349442 Sample_02_1242 Skin UISO_virus_negative 98 24 2653 220 1 78 664 ACOT7,ICMT,HES3,GPR153,LINC00337
SE_02_123900468 chr1:6268151-6278944 Sample_02_1239 Skin Waga_virus_positive 468 4 429 15 0 16 0 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_110600422 chr1:6268327-6278032 Sample_02_1106 Brain NGP 422 1 386 12 0 16 0 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_077502250 chr1:6268551-6273129 Sample_02_0775 Pancreas EndoC-BH1_SE 2250 1 179 5 0 14 0 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_046200155 chr1:6268896-6279801 Sample_02_0462 Lung NCI-H2171 cells 155 5 432 14 0 16 0 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_096000592 chr1:6269287-6276389 Sample_02_0960 Brain H3.3K27M_Tumor-derived cell-line_BT869p21-Rx_cells 592 4 269 9 0 14 0 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_129300040 chr1:6269453-6288562 Sample_02_1293 Lung JHU-LX22-SCLC PDX 40 4 662 36 1 27 198 ACOT7,ICMT,LINC00337,HES3,GPR153
SE_02_012400994 chr1:6272414-6310881 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 994 4 1241 93 1 29 278 ACOT7,ICMT,HES3,GPR153
SE_02_087501166 chr1:6277776-6323289 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 1166 18 1401 131 1 32 349 ACOT7,ICMT,GPR153,LINC00337,HES3,RPL22,PLEKHG5,THAP3,RNF207
SE_02_021600576 chr1:6286996-6318679 Sample_02_0216 Skin NHEK_scramble 576 8 983 92 0 22 137 ACOT7,HES3,GPR153
SE_02_047900723 chr1:6289381-6326583 Sample_02_0479 Head and neck SCC25 723 17 1142 116 0 21 151 ACOT7,HES3,GPR153
SE_02_127500128 chr1:6292259-6322057 Sample_02_1275 Prostate PC3_Vorinostat 128 21 914 89 0 21 151 ACOT7,HES3,GPR153,RPL22,ICMT,PLEKHG5,RNF207
SE_02_153700649 chr1:6293542-6303173 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 649 2 281 32 0 5 80 ACOT7,HES3,GPR153
SE_02_113100692 chr1:6293581-6304299 Sample_02_1131 Pancreas T3M4 wt 692 6 316 33 0 16 80 ACOT7,HES3,GPR153
SE_02_065201025 chr1:6293714-6303184 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1025 3 274 32 0 5 80 ACOT7,HES3,GPR153
SE_02_127400293 chr1:6293750-6318503 Sample_02_1274 Prostate PC3_DMSO 293 12 772 77 0 20 108 ACOT7,HES3,GPR153,RPL22,ICMT,PLEKHG5,RNF207
SE_02_042300457 chr1:6294915-6321044 Sample_02_0423 Skin A375 457 11 808 84 0 20 114 ACOT7,GPR153
SE_02_018000362 chr1:6298633-6319174 Sample_02_0180 melanoma CJM 362 4 664 64 0 16 71 ACOT7,GPR153
SE_02_006800226 chr1:6298656-6319129 Sample_02_0068 Skin A375_DMSO 226 8 661 64 0 16 71 ACOT7,GPR153
Genomic distribution of SEs associated with GPR153
Genome Browser

The strength of the tissue affected by the gene

Expression of GPR153

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)