Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000186281 |
| Gene: | GPAT2 | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chr2:96021946-96039451 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_021500105 | chr2:96019715-96038963 |
Sample_02_0215 | Skin | NHEK_siGRHL3 | 105 | 6 | 247 | 13 | 0 | 104 | 2061 | GPAT2,LOC729234 |
| SE_02_021600573 | chr2:96022925-96039484 |
Sample_02_0216 | Skin | NHEK_scramble | 573 | 9 | 139 | 9 | 0 | 85 | 1737 | GPAT2,LOC729234 |
| SE_02_068701092 | chr2:96036097-96072460 |
Sample_02_0687 | Lung | NCI-H146_no infection | 1092 | 10 | 427 | 26 | 0 | 62 | 8 | ANKRD36C,ADRA2B,FAHD2CP,GPAT2 |
| SE_02_117300720 | chr2:96047549-96073524 |
Sample_02_1173 | Brain | GBM01 | 720 | 13 | 465 | 31 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_119800584 | chr2:96047627-96073135 |
Sample_02_1198 | Brain | GBM34 | 584 | 10 | 451 | 30 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_119600862 | chr2:96047661-96073649 |
Sample_02_1196 | Brain | GBM32 | 862 | 12 | 466 | 31 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_121300599 | chr2:96047680-96073774 |
Sample_02_1213 | Brain | GBM31 | 599 | 10 | 471 | 31 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_129200212 | chr2:96047731-96072599 |
Sample_02_1292 | Lung | JHU-LX110-SCLC PDX | 212 | 7 | 429 | 26 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_121100884 | chr2:96047816-96072935 |
Sample_02_1211 | Brain | GBM21 | 884 | 5 | 438 | 28 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_120400814 | chr2:96047833-96073298 |
Sample_02_1204 | Brain | NB2 | 814 | 5 | 456 | 30 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_120301028 | chr2:96048248-96073189 |
Sample_02_1203 | Brain | NB1 | 1028 | 7 | 449 | 29 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_100800134 | chr2:96048265-96072892 |
Sample_02_1008 | Brain | Lateral temporal lobe_1T_AD | 134 | 13 | 434 | 27 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_100500190 | chr2:96048362-96063597 |
Sample_02_1005 | Brain | Lateral temporal lobe_11T_Old | 190 | 9 | 195 | 18 | 0 | 43 | 0 | FAHD2CP,GPAT2 |
| SE_02_101300320 | chr2:96048754-96072736 |
Sample_02_1013 | Brain | Lateral temporal lobe_6T_AD | 320 | 14 | 422 | 25 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_079000088 | chr2:96049155-96063924 |
Sample_02_0790 | Brain | DI28 | 88 | 4 | 194 | 18 | 0 | 43 | 0 | FAHD2CP,GPAT2 |
| SE_02_100000348 | chr2:96049177-96072150 |
Sample_02_1000 | Brain | Lateral temporal lobe_15T_Young | 348 | 5 | 403 | 25 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_100700179 | chr2:96049523-96072664 |
Sample_02_1007 | Brain | Lateral temporal lobe_14T_Old | 179 | 8 | 411 | 25 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_100900408 | chr2:96051402-96072113 |
Sample_02_1009 | Brain | Lateral temporal lobe_2T_AD | 408 | 7 | 388 | 24 | 0 | 57 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_123700044 | chr2:96055763-96074655 |
Sample_02_1237 | Skin | MKL2_virus_positive | 44 | 6 | 411 | 25 | 0 | 50 | 0 | ADRA2B,FAHD2CP,GPAT2 |
| SE_02_123900104 | chr2:96061479-96074574 |
Sample_02_1239 | Skin | Waga_virus_positive | 104 | 6 | 340 | 15 | 0 | 28 | 0 | ADRA2B,GPAT2 |
| SE_02_123600103 | chr2:96061533-96075711 |
Sample_02_1236 | Skin | MKL1_virus_positive | 103 | 5 | 360 | 15 | 0 | 28 | 0 | ADRA2B,GPAT2 |
| SE_02_001900678 | chr2:96063178-96112462 |
Sample_02_0019 | Embryo | Neural crest cells | 678 | 15 | 1189 | 51 | 0 | 75 | 0 | ADRA2B,GPAT2,ASTL,DUSP2 |
| SE_02_074000578 | chr2:96065360-96074642 |
Sample_02_0740 | Muscle | RH3 | 578 | 3 | 249 | 11 | 0 | 13 | 0 | ADRA2B,GPAT2 |
| SE_02_107800351 | chr2:96065368-96074552 |
Sample_02_1078 | Muscle | RMS235_PAX3-NCOA1 | 351 | 6 | 248 | 11 | 0 | 13 | 0 | ADRA2B,GPAT2 |
| SE_02_037400325 | chr2:96067141-96074630 |
Sample_02_0374 | Skeletal muscle | RMS209 | 325 | 3 | 210 | 9 | 0 | 2 | 0 | ADRA2B,GPAT2 |
| SE_02_107900397 | chr2:96067453-96074548 |
Sample_02_1079 | Muscle | RMS246_PAX3-NCOA1 | 397 | 5 | 200 | 8 | 0 | 2 | 0 | ADRA2B,GPAT2 |
Genomic distribution of SEs associated with GPAT2