SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000071889
Gene: FAM3A Gene type: protein_coding
Strand: - External links:
Genomic region: chrX:154506159-154516242 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_046600894 chrX:154505240-154545263 Sample_02_0466 Adipose visceral adipocytes 894 16 1015 58 3 115 2489 FAM3A,IKBKG,G6PD,CTAG1B,SLC10A3,PLXNA3,LAGE3,UBL4A,FAM223A
SE_02_152700284 chrX:154505464-154532639 Sample_02_1527 Embryo naive embryonic stem cell 284 9 729 39 0 67 1591 FAM3A,G6PD,IKBKG,SLC10A3,PLXNA3,LAGE3,UBL4A,FAM223A
SE_02_074600783 chrX:154505702-154532189 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 783 10 703 37 0 61 1448 FAM3A,G6PD,IKBKG,SLC10A3,PLXNA3,LAGE3,UBL4A,FAM223A
SE_02_074500594 chrX:154505924-154532223 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 594 8 691 36 0 65 1422 FAM3A,G6PD,IKBKG,SLC10A3,PLXNA3,LAGE3,UBL4A,FAM223A
SE_02_074400721 chrX:154516357-154527180 Sample_02_0744 Embryo ES derived cardiac mesoderm_day5 721 2 309 20 0 2 24 IKBKG,SLC10A3,LAGE3,G6PD,FAM3A,UBL4A,FAM223A
Genomic distribution of SEs associated with FAM3A
Genome Browser

The strength of the tissue affected by the gene

Expression of FAM3A

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)