SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000135063
Gene: FAM189A2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr9:69324567-69392558 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_038200080 chr9:69292508-69394365 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 80 15 2591 193 10 198 1108 FAM189A2
SE_02_038100073 chr9:69294545-69394441 Sample_02_0381 Heart purified cardiomyocyte WT 73 15 2535 186 10 193 1108 FAM189A2
SE_01_002300119 chr9:69294632-69310545 Sample_01_0023 Embryo cardiac-muscle-cell 119 3 381 15 1 20 251 FAM189A2
SE_02_092100114 chr9:69294875-69398199 Sample_02_0921 Heart embryonic heart_CS22 114 52 2648 194 10 212 1108 BANCR,FAM189A2
SE_02_092300141 chr9:69295258-69397833 Sample_02_0923 Heart fetal heart_PCW10_12522 141 27 2634 194 10 212 1108 BANCR,FAM189A2
SE_02_092500129 chr9:69295345-69398297 Sample_02_0925 Heart fetal heart_PCW17_12570 129 28 2641 194 10 212 1108 BANCR,FAM189A2
SE_02_074600075 chr9:69295355-69397913 Sample_02_0746 Embryo ES derived primitive cardiomyocite_day15 75 46 2630 194 10 212 1108 BANCR,FAM189A2
SE_02_092400323 chr9:69295434-69340095 Sample_02_0924 Heart fetal heart_PCW10_12569 323 11 1081 70 8 96 432 BANCR,FAM189A2
SE_02_074700200 chr9:69295923-69398141 Sample_02_0747 Embryo ES derived ventricular cardiomyocyte_day80 200 53 2615 193 10 211 1108 BANCR,FAM189A2
SE_02_156700746 chr9:69306400-69340234 Sample_02_1567 iPSCs CiPSC 746 4 824 58 8 90 284 BANCR,FAM189A2
SE_02_157000906 chr9:69306574-69340153 Sample_02_1570 iPSCs EiPSC 906 4 815 58 8 90 277 BANCR,FAM189A2
SE_00_001300421 chr9:69307234-69309406 Sample_00_0013 Embryo H9 421 1 61 1 1 12 0 FAM189A2
SE_02_107800506 chr9:69317765-69332018 Sample_02_1078 Muscle RMS235_PAX3-NCOA1 506 6 345 27 3 49 152 FAM189A2,BANCR
SE_02_091300596 chr9:69322097-69398703 Sample_02_0913 Heart left ventricle_DCM_LV1304 596 26 2010 160 4 170 857 FAM189A2,BANCR
SE_02_089800528 chr9:69322132-69398323 Sample_02_0898 Heart left ventricle_LV1356 528 25 1999 159 4 170 857 FAM189A2,BANCR
SE_01_002300274 chr9:69323338-69394221 Sample_01_0023 Embryo cardiac-muscle-cell 274 11 1832 148 4 149 857 FAM189A2
SE_01_007600494 chr9:69324025-69398768 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 494 7 1960 154 4 168 857 FAM189A2
SE_01_009700557 chr9:69324070-69398326 Sample_01_0097 Gastrocnemius medialis gastrocnemius medialis_53y 557 24 1948 154 4 168 857 FAM189A2,BANCR
SE_01_009400305 chr9:69325548-69398416 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 305 32 1914 149 4 157 771 FAM189A2,BANCR
SE_02_090400804 chr9:69325573-69398356 Sample_02_0904 Heart left ventricle_DCM_LV1028 804 21 1913 149 4 157 771 FAM189A2,BANCR
SE_02_090100723 chr9:69325579-69398195 Sample_02_0901 Heart left ventricle_LV1471 723 23 1908 149 4 157 771 FAM189A2,BANCR
SE_02_092200598 chr9:69325582-69398223 Sample_02_0922 Heart fetal heart_PCW10_12434 598 19 1908 149 4 157 771 FAM189A2,BANCR
SE_02_088700713 chr9:69325731-69398336 Sample_02_0887 Heart left ventricle_LV1121 713 13 1911 149 4 152 771 FAM189A2,BANCR
SE_02_090700708 chr9:69326336-69398246 Sample_02_0907 Heart left ventricle_DCM_LV1223 708 22 1889 148 4 152 771 FAM189A2,BANCR
SE_02_088900826 chr9:69326418-69398412 Sample_02_0889 Heart left ventricle_LV1183 826 18 1893 147 4 146 771 FAM189A2,BANCR
SE_02_089700523 chr9:69338648-69398496 Sample_02_0897 Heart left ventricle_LV1325 523 22 1596 127 2 115 676 FAM189A2,BANCR
SE_02_089200765 chr9:69339325-69398383 Sample_02_0892 Heart left ventricle_LV1215 765 20 1581 124 2 115 676 FAM189A2,BANCR
SE_02_091200815 chr9:69339838-69398451 Sample_02_0912 Heart left ventricle_DCM_LV1300 815 16 1567 123 2 115 676 FAM189A2,BANCR
SE_02_089300658 chr9:69339920-69398310 Sample_02_0893 Heart left ventricle_LV1226 658 13 1565 123 2 115 676 FAM189A2,BANCR
SE_02_089100943 chr9:69356221-69398337 Sample_02_0891 Heart left ventricle_LV1202 943 14 1115 88 1 91 676 FAM189A2,BANCR
SE_02_092000961 chr9:69356672-69398306 Sample_02_0920 Heart left ventricle_DCM_LV1535 961 14 1108 87 1 91 676 FAM189A2,BANCR
SE_02_090500870 chr9:69356688-69398371 Sample_02_0905 Heart left ventricle_DCM_LV1033 870 14 1109 87 1 91 676 FAM189A2,BANCR
SE_02_090300833 chr9:69356711-69398265 Sample_02_0903 Heart left ventricle_DCM_LV1009 833 13 1106 87 1 91 676 FAM189A2,BANCR
SE_02_091100732 chr9:69356891-69398313 Sample_02_0911 Heart left ventricle_DCM_LV1290 732 17 1104 87 1 91 676 FAM189A2,BANCR
SE_02_091001130 chr9:69357014-69398546 Sample_02_0910 Heart left ventricle_DCM_LV1275 1130 16 1103 87 1 91 676 FAM189A2,BANCR
SE_00_003300576 chr9:69357121-69389636 Sample_00_0033 Psoas muscle psoas-muscle_3y 576 7 831 71 1 65 481 FAM189A2
SE_02_091901067 chr9:69357223-69398310 Sample_02_0919 Heart left ventricle_DCM_LV1532 1067 12 1095 87 1 91 676 FAM189A2
SE_02_152201180 chr9:69369791-69398500 Sample_02_1522 Skin A375 RTKi 1180 6 796 53 1 89 676 FAM189A2
SE_02_036700576 chr9:69375721-69398476 Sample_02_0367 Skeletal muscle NS129 576 6 664 43 1 76 601 FAM189A2
SE_02_143400241 chr9:69376390-69412762 Sample_02_1434 Trophoblast trophoblast stem cells 241 7 1084 66 1 78 566 FAM189A2
SE_02_143500201 chr9:69376410-69410866 Sample_02_1435 Trophoblast trophoblast stem cells_MSX2_KD 201 8 1012 66 1 78 566 FAM189A2
SE_02_075500964 chr9:69397015-69412846 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 964 4 491 26 0 8 0 FAM189A2
SE_02_075200864 chr9:69397429-69412530 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 864 3 471 26 0 8 0 FAM189A2
SE_02_055900804 chr9:69404077-69413433 Sample_02_0559 iPSCs FX52 iPSCs dC-T 804 6 338 13 0 0 0 FAM189A2
SE_02_056000661 chr9:69404401-69411446 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 661 4 234 10 0 0 0 FAM189A2
SE_02_045600115 chr9:69440169-69522603 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 115 17 2106 78 7 251 922 APBA1,FAM189A2
SE_02_045400239 chr9:69454053-69522007 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 239 13 1627 71 3 221 660 APBA1,FAM189A2
SE_02_123900375 chr9:69470406-69513849 Sample_02_1239 Skin Waga_virus_positive 375 13 985 40 2 86 84 APBA1,FAM189A2
SE_02_045700235 chr9:69474191-69505223 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 235 10 756 33 1 72 61 APBA1,FAM189A2
SE_02_139200388 chr9:69476180-69525259 Sample_02_1392 Peripheral blood Mac-2A_ALK- 388 15 1143 59 2 141 336 APBA1,FAM189A2
Genomic distribution of SEs associated with FAM189A2
Genome Browser

The strength of the tissue affected by the gene

Expression of FAM189A2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)