SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000162616
Gene: DNAJB4 Gene type: protein_coding
Strand: + External links:
Genomic region: chr1:77979175-78017964 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_091300638 chr1:77972126-78016018 Sample_02_0913 Heart left ventricle_DCM_LV1304 638 12 1038 96 2 8 274 DNAJB4,FUBP1,GIPC2
SE_02_133200336 chr1:77974152-78011234 Sample_02_1332 Blood Monomac6_CTRL 336 9 885 72 2 0 177 DNAJB4,FUBP1,GIPC2
SE_02_038200391 chr1:77974645-78011725 Sample_02_0382 Heart purified cardiomyocyte G296S mutants 391 5 879 71 2 0 177 DNAJB4,FUBP1,GIPC2
SE_01_007600813 chr1:77974675-78015578 Sample_01_0076 Gastrocnemius medialis gastrocnemius-medialis 813 4 961 83 2 8 259 DNAJB4,FUBP1,GIPC2
SE_01_009301262 chr1:77976019-78011859 Sample_01_0093 Aorta ascending aorta 1262 9 842 64 2 0 177 DNAJB4,FUBP1,GIPC2
SE_01_010300178 chr1:77976217-78010997 Sample_01_0103 Pancreas pancreas_37y 178 12 815 63 2 0 177 DNAJB4,FUBP1,GIPC2
SE_00_002000657 chr1:77976706-78011942 Sample_00_0020 Large intestine large-intestine_108d 657 5 825 64 2 0 177 DNAJB4,FUBP1,GIPC2
SE_01_010100374 chr1:77977121-78010256 Sample_01_0101 Pancreas pancreas_54y 374 11 785 61 2 0 177 DNAJB4,FUBP1,GIPC2
SE_02_143000779 chr1:77993203-78006315 Sample_02_1430 Blood Kasumi-3_mock-infected 779 2 306 24 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_058900382 chr1:77999767-78009283 Sample_02_0589 Cervix HeLa Kyoto_Luci siRNA 382 6 190 13 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_137801023 chr1:78000089-78019610 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 1023 8 379 36 1 26 238 DNAJB4,GIPC2,FUBP1
SE_02_149700653 chr1:78000246-78009574 Sample_02_1497 Brain SHEP-21N 653 5 182 14 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_150301180 chr1:78000281-78008602 Sample_02_1503 Brain SHEP-21N_DOX_2h_NOSPIKE 1180 4 168 12 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_059000576 chr1:78000292-78009216 Sample_02_0590 Cervix HeLa Kyoto_Luci PWWP2A siRNA 576 4 178 13 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_058800382 chr1:78000310-78010552 Sample_02_0588 Cervix HeLa Kyoto_untreated 382 6 195 14 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_127900817 chr1:78000318-78023954 Sample_02_1279 Bone Mesenchymal stem cells 817 13 472 43 1 26 238 DNAJB4,GIPC2,FUBP1
SE_02_143801528 chr1:78000357-78022881 Sample_02_1438 Liver LSEC 1528 6 445 38 1 26 238 DNAJB4,GIPC2,FUBP1
SE_02_094901127 chr1:78000376-78012081 Sample_02_0949 Umbilical artery HUAEC_WT 1127 7 225 16 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_148300467 chr1:78000883-78010090 Sample_02_1483 Bone RD-ES 467 3 175 14 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_148500978 chr1:78001028-78011149 Sample_02_1485 Bone SK-ES-1 978 5 193 15 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_146800387 chr1:78001286-78009163 Sample_02_1468 Blood HUDEP-2_WT 387 2 153 12 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_106000475 chr1:78001398-78011081 Sample_02_1060 Bone TC71_SA2 KO 475 5 184 15 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_147700699 chr1:78001404-78008037 Sample_02_1477 Bone EW-22 699 2 137 9 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_017200992 chr1:78001624-78011572 Sample_02_0172 Lung IMR-90_quiescent 992 1 187 14 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_151600570 chr1:78002109-78007304 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 570 1 111 7 1 0 58 DNAJB4,GIPC2,FUBP1
SE_01_002600612 chr1:78002484-78011312 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 612 1 165 11 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_032700980 chr1:78002514-78007432 Sample_02_0327 Liver hepatocytes_d6 980 1 105 6 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_021200121 chr1:78002658-78007238 Sample_02_0212 Burkitts lymphoma of the left maxilla Raji_DMSO 121 1 100 6 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_032601005 chr1:78002681-78007671 Sample_02_0326 Liver hepatocytes_d3 1005 1 107 6 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_130800589 chr1:78002694-78011330 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 589 2 164 11 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_130900868 chr1:78002695-78009497 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 868 2 128 8 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_145201103 chr1:78002776-78006821 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 1103 1 91 6 1 0 58 DNAJB4,GIPC2,FUBP1
SE_02_143601482 chr1:78002804-78022683 Sample_02_1436 Liver LSEC-Ctrl 1482 8 390 33 1 26 238 DNAJB4,GIPC2,FUBP1
SE_02_113700873 chr1:78059016-78105121 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 873 10 1031 98 3 59 91 GIPC2,DNAJB4
SE_02_045200822 chr1:78061157-78114425 Sample_02_0452 Skin hTERT immortalised human skin fibroblasts_Non-tumourigenic 822 14 1210 117 3 64 91 GIPC2,DNAJB4
SE_02_011100639 chr1:78078976-78105284 Sample_02_0111 Ovaries IOE4 639 4 591 60 2 32 91 GIPC2,DNAJB4
SE_02_156800438 chr1:78094358-78114585 Sample_02_1568 Heart Cardiac progenitor cells 438 5 487 38 1 25 56 GIPC2,DNAJB4
SE_02_127200191 chr1:78094821-78112408 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 191 10 419 23 1 23 45 GIPC2,DNAJB4
SE_02_135501164 chr1:78095064-78105479 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 1164 2 247 13 1 18 21 GIPC2,DNAJB4
SE_02_093601052 chr1:78095163-78105097 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 1052 2 232 13 1 18 7 GIPC2,DNAJB4
SE_02_009000238 chr1:78095196-78103361 Sample_02_0090 Umbilical cord umbilical-cord-derived-mesenchymal-stem-cells_SGA_cycle_6 238 2 183 12 1 13 2 GIPC2,DNAJB4
SE_02_093801321 chr1:78095398-78105192 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 1321 3 231 13 1 18 0 GIPC2,DNAJB4
SE_02_003801141 chr1:78198640-78217087 Sample_02_0038 Embryo DE 1141 3 489 51 2 0 0 MGC27382,DNAJB4
Genomic distribution of SEs associated with DNAJB4
Genome Browser

The strength of the tissue affected by the gene

Expression of DNAJB4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)