SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000186567
Gene: CEACAM19 Gene type: protein_coding
Strand: + External links:
Genomic region: chr19:44662278-44684359 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_147000815 chr19:44648026-44695908 Sample_02_1470 Umbilical Vein H441 815 9 1367 115 3 34 2333 MIR4531,PVR,CEACAM19,IGSF23,CEACAM16
SE_02_071300994 chr19:44665420-44696524 Sample_02_0713 Pancreas BxPC3_sgTP63 994 6 886 79 2 24 1163 PVR,CEACAM19,MIR4531,CEACAM16
SE_02_136600874 chr19:44666302-44696224 Sample_02_1366 Pancreas BxPC3-untreated 874 7 860 75 2 24 1026 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_125400602 chr19:44666356-44696176 Sample_02_1254 Bladder Bladder tumor Basal1 602 6 858 74 2 24 1023 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_082700267 chr19:44666796-44696974 Sample_02_0827 Stomach normal gastric 267 7 864 79 2 24 1023 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_099100843 chr19:44676752-44693222 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 843 6 536 53 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
SE_02_047401344 chr19:44676893-44692705 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1344 4 515 50 2 16 640 CEACAM19,MIR4531,PVR,CEACAM16
Genomic distribution of SEs associated with CEACAM19
Genome Browser

The strength of the tissue affected by the gene

Expression of CEACAM19

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)