SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000125810
Gene: CD93 Gene type: protein_coding
Strand: - External links:
Genomic region: chr20:23079360-23086324 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_011200425 chr20:22373728-22395778 Sample_02_0112 Connective tissue HT1080_untreated 425 6 674 27 2 21 0 LOC284788,CD93
SE_02_011300287 chr20:22374188-22391769 Sample_02_0113 Connective tissue HT1080_DOX5d 287 4 537 20 2 1 0 LOC284788,CD93
SE_02_142901246 chr20:22915171-22942917 Sample_02_1429 Blood GM12878_WT 1246 9 785 3 2 14 0 SSTR4,CD93
SE_02_156900273 chr20:23048022-23107691 Sample_02_1569 Endothelial Endothelial cells 273 9 1913 117 33 175 1568 THBD,CD93,LINC00656,SSTR4
SE_02_002700094 chr20:23048170-23108098 Sample_02_0027 Umbilical vein HUVEC_VEGF_4h 94 6 1917 119 33 178 1535 CD93,THBD,SSTR4,LOC200261
SE_02_083200295 chr20:23061105-23107486 Sample_02_0832 Umblical vein HUVECs_TNF30min 295 23 1522 90 29 139 1180 CD93,THBD,LINC00656,SSTR4
SE_01_002600355 chr20:23061266-23107407 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 355 5 1515 90 29 139 1180 CD93,SSTR4,LOC200261,THBD
SE_02_151800159 chr20:23061384-23107015 Sample_02_1518 Umbilical vein HUVEC_Scr 159 16 1500 90 29 139 1180 CD93,THBD,LINC00656,SSTR4
SE_02_152000110 chr20:23061472-23120527 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 110 19 1960 139 38 157 1180 CD93,THBD,LINC00656,SSTR4
SE_02_062000258 chr20:23061479-23107206 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 258 12 1505 90 29 138 1180 CD93,THBD,LINC00656,SSTR4,NXT1,GZF1
SE_02_077501894 chr20:23070293-23110397 Sample_02_0775 Pancreas EndoC-BH1_SE 1894 10 1327 81 25 141 1180 CD93,THBD,LINC00656,SSTR4
SE_02_130800299 chr20:23072785-23107334 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 299 9 1148 68 21 115 1180 CD93,THBD,LINC00656,SSTR4
SE_02_130900163 chr20:23072809-23107472 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 163 8 1152 68 21 114 1180 CD93,THBD,LINC00656,SSTR4
SE_02_151900247 chr20:23073341-23107024 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 247 13 1125 67 21 114 1180 CD93,THBD,LINC00656,SSTR4
SE_02_088700788 chr20:23077121-23120958 Sample_02_0887 Heart left ventricle_LV1121 788 12 1476 111 28 132 1180 CD93,THBD,LINC00656,SSTR4
SE_02_139000389 chr20:23079425-23095606 Sample_02_1390 Peripheral blood SU-DHL-1_ALK+ 389 4 541 19 7 74 1154 CD93,THBD,LINC00656,SSTR4
SE_02_091400556 chr20:23080256-23120966 Sample_02_0914 Heart left ventricle_DCM_LV1342 556 13 1381 106 25 118 1096 CD93,THBD,LINC00656,SSTR4
SE_00_000600625 chr20:23080312-23088787 Sample_00_0006 Blood CD14-positive-monocyte 625 1 295 9 3 56 1093 CD93,SSTR4,LOC200261,THBD
SE_02_095000588 chr20:23080326-23088537 Sample_02_0950 Umbilical vein HUVEC_WT 588 1 289 8 2 55 1093 CD93,THBD,LINC00656,SSTR4
SE_02_088800651 chr20:23080455-23126954 Sample_02_0888 Heart left ventricle_LV1160 651 17 1566 121 31 130 1413 LINC00656,CD93,THBD,SSTR4
SE_02_089600549 chr20:23080550-23126200 Sample_02_0896 Heart left ventricle_LV1294 549 15 1540 118 30 128 1289 LINC00656,CD93,THBD,SSTR4
SE_02_135000414 chr20:23080853-23088154 Sample_02_1350 Leukophereses leukophereses_p456 414 2 260 7 2 55 1024 CD93,THBD,LINC00656,SSTR4
SE_02_018200353 chr20:23081068-23087788 Sample_02_0182 melanoma LOX-IMVI 353 1 240 7 2 54 999 CD93,SSTR4,LOC200261,THBD
SE_02_089801080 chr20:23081348-23121192 Sample_02_0898 Heart left ventricle_LV1356 1080 8 1359 106 25 118 949 CD93,THBD,LINC00656,SSTR4
SE_02_091500430 chr20:23081589-23129468 Sample_02_0915 Heart left ventricle_DCM_LV1371 430 17 1609 132 32 130 1412 LINC00656,CD93,THBD,SSTR4
SE_00_000300679 chr20:23081767-23117889 Sample_00_0003 Adrenal gland adrenal-gland_97d 679 5 1207 89 24 117 872 CD93,SSTR4,LOC200261,THBD
SE_02_134700144 chr20:23081812-23088123 Sample_02_1347 Leukophereses leukophereses_p401 144 3 226 7 2 55 864 CD93,THBD,LINC00656,SSTR4
SE_02_125400661 chr20:23082303-23103161 Sample_02_1254 Bladder Bladder tumor Basal1 661 6 722 41 10 84 803 CD93,THBD,LINC00656,SSTR4
SE_02_138800946 chr20:23082469-23103513 Sample_02_1388 Peripheral blood JB6_ALK+ 946 4 724 40 10 86 776 CD93,THBD,LINC00656,SSTR4
SE_00_001100872 chr20:23082476-23102246 Sample_00_0011 Esophagus esophagus 872 3 696 37 9 80 775 CD93,SSTR4,LOC200261,THBD
SE_02_138600696 chr20:23083071-23095090 Sample_02_1386 Peripheral blood Karpas-299_ALK+ 696 4 413 16 5 66 707 CD93,THBD,LINC00656,SSTR4
SE_02_146900267 chr20:23083604-23088431 Sample_02_1469 Umbilical Vein HUVEC 267 1 189 5 1 48 657 CD93,THBD,LINC00656,SSTR4
SE_00_005100770 chr20:23083632-23126230 Sample_00_0051 Adrenal gland adrenal gland 30y 770 12 1446 116 29 120 876 LINC00656,CD93,THBD,SSTR4
SE_02_064800866 chr20:23136145-23167495 Sample_02_0648 Tracheobronchial epithelial HTBE_H3N2_03h 866 17 1029 59 9 55 0 CD93,LINC00656
SE_02_064701274 chr20:23136505-23161811 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 1274 11 797 49 6 52 0 LINC00656,CD93
SE_02_105200376 chr20:23136549-23162856 Sample_02_1052 Esophagus JH-EsoAd1 376 9 830 52 6 52 0 LINC00656,CD93
SE_02_126301133 chr20:23139404-23160604 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 1133 12 675 37 4 50 0 LINC00656,CD93
SE_02_153700054 chr20:23139563-23162901 Sample_02_1537 Mammary gland MDA-MB-231_ER?_L540Q_45min 54 8 754 47 6 50 0 LINC00656,CD93
SE_02_122800115 chr20:23141080-23162155 Sample_02_1228 Mammary gland MDA-MB-231_2 115 12 690 43 6 50 0 LINC00656,CD93
SE_02_132100602 chr20:23141711-23161451 Sample_02_1321 Connective Tissue HT1080_FUS-DDIT3 602 10 641 37 6 45 0 LINC00656,CD93
SE_02_127901358 chr20:23141900-23167917 Sample_02_1279 Bone Mesenchymal stem cells 1358 6 879 50 9 47 0 LINC00656,CD93
SE_02_153500008 chr20:23141971-23160338 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 8 5 593 31 4 44 0 LINC00656,CD93
SE_02_132200963 chr20:23142062-23161754 Sample_02_1322 Connective Tissue HT1080_WT 963 10 642 38 6 44 0 LINC00656,CD93
SE_02_141600781 chr20:23142436-23181342 Sample_02_1416 Brain SF9402 781 8 1259 72 9 55 0 LINC00656,CD93
SE_02_138000555 chr20:23142501-23161109 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 555 12 603 36 6 41 0 LINC00656,CD93
SE_00_000400301 chr20:23142653-23157027 Sample_00_0004 Aorta aorta 301 10 451 27 4 24 0 LOC200261,CD93
Genomic distribution of SEs associated with CD93
Genome Browser

The strength of the tissue affected by the gene

Expression of CD93

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)