SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000178562
Gene: CD28 Gene type: protein_coding
Strand: + External links:
Genomic region: chr2:203706475-203738912 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_147900475 chr2:203619195-203652261 Sample_02_1479 Bone EW-7 475 10 840 13 2 120 0 CD28
SE_02_144500938 chr2:203619398-203652579 Sample_02_1445 Adipose SW872_TAZ4SA 938 14 846 13 2 115 0 CD28
SE_02_044600437 chr2:203621697-203713926 Sample_02_0446 Bone osteosarcoma tumor P2 437 43 2364 42 5 263 72 CD28
SE_02_028000071 chr2:203622520-203693017 Sample_02_0280 Mammary gland SUM159_DMSO_24h 71 7 1826 18 4 227 0 CD28
SE_02_058600041 chr2:203622549-203710680 Sample_02_0586 Chordal patient-derived chordoma MGH_4 41 23 2274 34 5 249 72 CD28
SE_02_040100250 chr2:203622628-203691435 Sample_02_0401 Mammary gland SUM159PT-T47D 250 10 1790 17 4 213 0 CD28
SE_02_059400833 chr2:203622747-203689877 Sample_02_0594 iPSC-derived neural progenitors 833 11 1734 17 4 208 0 CD28
SE_02_034800170 chr2:203622996-203749182 Sample_02_0348 Peripheral blood CUTLL1_wild-type 170 15 3203 111 16 370 663 CD28
SE_02_034900134 chr2:203623060-203760043 Sample_02_0349 Peripheral blood CUTLL1_dimer-mutant 134 13 3498 126 16 370 663 CD28
SE_02_132800444 chr2:203623367-203652627 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 444 12 727 8 2 97 0 CD28
SE_02_003100167 chr2:203623432-203723440 Sample_02_0031 Haematopoietic and lymphoid tissue blood Jurkat 167 11 2531 57 7 278 72 CD28
SE_02_044700032 chr2:203623461-203721662 Sample_02_0447 Lung lung metastasis from primary osteosarcoma tumor M2 32 38 2487 52 6 278 72 CD28
SE_02_141001348 chr2:203623648-203665483 Sample_02_1410 Brain GSC6 1348 6 1080 14 3 110 0 CD28
SE_02_061400614 chr2:203623716-203657614 Sample_02_0614 Liposarcoma MLPS_T2 614 11 871 9 2 103 0 CD28
SE_02_044400753 chr2:203627405-203695306 Sample_02_0444 Bone osteosarcoma tumor P10 753 23 1731 16 4 211 0 CD28
SE_02_014400673 chr2:203636664-203689959 Sample_02_0144 Peripheral blood MV411_DMSO 673 5 1374 11 2 151 0 CD28
SE_02_066000225 chr2:203636774-203688954 Sample_02_0660 Mammary gland MCF10DCIS 225 14 1343 11 2 149 0 CD28
SE_02_102100083 chr2:203637113-203689921 Sample_02_1021 Mammary gland SUM159R 83 12 1364 11 2 151 0 CD28
SE_02_131700541 chr2:203637448-203674511 Sample_02_1317 Brain hMGLs_SORL1-KO 541 8 961 10 1 73 0 CD28
SE_02_032200259 chr2:203646133-203714037 Sample_02_0322 Colon Caco-2 259 10 1715 33 3 179 72 CD28
SE_02_151300863 chr2:203647914-203684622 Sample_02_1513 Lung Transitional AT2->1 cells 863 9 946 11 2 98 0 CD28
SE_02_059600509 chr2:203649095-203689435 Sample_02_0596 Mammary gland MCF10A_ DMSO 509 7 1046 9 2 125 0 CD28
SE_02_149400571 chr2:203649934-203660742 Sample_02_1494 Other monocyte-derived dendritic cells_0h 571 10 297 3 0 22 0 CD28
SE_02_151500209 chr2:203650005-203689541 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 209 11 1026 9 2 120 0 CD28
SE_02_071200460 chr2:203651177-203688855 Sample_02_0712 Pancreas BxPC3_sgNEG 460 12 980 9 2 114 0 CD28
SE_02_122700219 chr2:203651289-203721848 Sample_02_1227 Bone marrow U266 219 21 1795 45 5 190 72 CD28
SE_02_014600035 chr2:203651373-203746064 Sample_02_0146 Bone marrow LP-1_SGC-CBP30 35 27 2411 98 12 280 663 CD28
SE_02_071300977 chr2:203651749-203688727 Sample_02_0713 Pancreas BxPC3_sgTP63 977 10 970 9 2 112 0 CD28
SE_02_012600016 chr2:203654592-203911795 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 16 34 6636 337 56 741 1048 CD28,CTLA4,ICOS
SE_02_013200008 chr2:203654592-203911795 Sample_02_0132 Lung 1015_CL 8 34 6636 337 56 741 1048 CD28,CTLA4,ICOS
SE_02_017600162 chr2:203667128-203723723 Sample_02_0176 Peripheral blood LOUCY 162 5 1397 43 4 165 72 CD28
SE_02_143701198 chr2:203669475-203692490 Sample_02_1437 Liver LSEC-TNF 1198 8 582 2 1 109 0 CD28
SE_02_143801399 chr2:203669478-203691230 Sample_02_1438 Liver LSEC 1399 8 561 2 1 97 0 CD28
SE_02_127901458 chr2:203670144-203691101 Sample_02_1279 Bone Mesenchymal stem cells 1458 7 540 2 1 97 0 CD28
SE_02_132800276 chr2:203670567-203689862 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 276 8 493 2 1 92 0 CD28
SE_02_131000382 chr2:203670870-203694600 Sample_02_1310 Bone marrow ASMSCs 382 5 603 3 1 115 0 CD28
SE_02_151700120 chr2:203671993-203689352 Sample_02_1517 Mammary gland non-transformed human mammary epithelial cell 120 4 436 1 1 92 0 CD28
SE_02_044500944 chr2:203672205-203695582 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 944 13 583 2 1 116 0 CD28
SE_02_151600105 chr2:203672211-203692022 Sample_02_1516 Non-transformed mammary epithelial IMEC MYC 105 10 501 1 1 97 0 CD28
SE_02_043900600 chr2:203672302-203689473 Sample_02_0439 Bone Hu09 600 9 434 1 1 92 0 CD28
SE_02_044000309 chr2:203672315-203689399 Sample_02_0440 Bone LM7 309 9 433 1 1 92 0 CD28
SE_02_085800440 chr2:203672952-203689793 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 440 3 432 1 1 92 0 CD28
SE_02_036600327 chr2:203673082-203693653 Sample_02_0366 Skeletal muscle NCI0082 327 2 528 1 1 113 0 CD28
SE_02_089500382 chr2:203673329-203692940 Sample_02_0895 Heart left ventricle_LV1259 382 9 502 1 1 111 0 CD28
SE_02_122100209 chr2:203673375-203718843 Sample_02_1221 Bone marrow KMS11 209 11 1134 30 3 149 72 CD28
SE_02_089201427 chr2:203673414-203693893 Sample_02_0892 Heart left ventricle_LV1215 1427 13 525 1 1 113 0 CD28
SE_02_088901454 chr2:203673443-203694644 Sample_02_0889 Heart left ventricle_LV1183 1454 8 538 2 1 115 0 CD28
SE_02_091500505 chr2:203673480-203694699 Sample_02_0915 Heart left ventricle_DCM_LV1371 505 10 537 2 1 116 0 CD28
SE_02_090000735 chr2:203673595-203694590 Sample_02_0900 Heart left ventricle_LV1452 735 11 531 2 1 115 0 CD28
SE_02_089301039 chr2:203673599-203694101 Sample_02_0893 Heart left ventricle_LV1226 1039 10 519 2 1 113 0 CD28
SE_02_089601057 chr2:203673674-203694848 Sample_02_0896 Heart left ventricle_LV1294 1057 7 530 2 1 116 0 CD28
SE_02_089701026 chr2:203673683-203694294 Sample_02_0897 Heart left ventricle_LV1325 1026 12 518 2 1 115 0 CD28
SE_02_090800928 chr2:203673729-203695118 Sample_02_0908 Heart left ventricle_DCM_LV1262 928 7 541 2 1 116 0 CD28
SE_02_091800485 chr2:203673868-203694276 Sample_02_0918 Heart left ventricle_DCM_LV1437 485 9 513 2 1 113 0 CD28
SE_02_091200790 chr2:203673904-203694813 Sample_02_0912 Heart left ventricle_DCM_LV1300 790 8 526 2 1 112 0 CD28
SE_02_091900828 chr2:203673919-203694782 Sample_02_0919 Heart left ventricle_DCM_LV1532 828 13 526 2 1 111 0 CD28
SE_02_113801118 chr2:203673987-203689044 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 1118 6 385 1 1 86 0 CD28
SE_02_087600419 chr2:203673992-203695537 Sample_02_0876 Muscle SMS-CTR_CASZ1b_Ctrl 419 10 543 2 1 110 0 CD28
SE_02_093800414 chr2:203673998-203686823 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 414 2 325 1 1 76 0 CD28
SE_02_090701370 chr2:203674021-203694602 Sample_02_0907 Heart left ventricle_DCM_LV1223 1370 10 521 2 1 108 0 CD28
SE_02_090600800 chr2:203674045-203694371 Sample_02_0906 Heart left ventricle_DCM_LV1072 800 9 513 2 1 108 0 CD28
SE_02_090501165 chr2:203674074-203694831 Sample_02_0905 Heart left ventricle_DCM_LV1033 1165 7 522 2 1 109 0 CD28
SE_02_092000536 chr2:203674088-203694249 Sample_02_0920 Heart left ventricle_DCM_LV1535 536 7 509 2 1 108 0 CD28
SE_02_113701097 chr2:203674119-203688925 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 1097 4 377 1 1 81 0 CD28
SE_02_091001022 chr2:203674205-203694245 Sample_02_0910 Heart left ventricle_DCM_LV1275 1022 9 506 2 1 101 0 CD28
SE_02_057100587 chr2:203674227-203687240 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 587 5 330 1 1 72 0 CD28
SE_02_057200420 chr2:203674244-203687788 Sample_02_0572 Brain LN229_1_mM_glucose 420 7 344 1 1 72 0 CD28
SE_02_091101196 chr2:203674337-203693820 Sample_02_0911 Heart left ventricle_DCM_LV1290 1196 12 497 1 1 99 0 CD28
SE_02_057000317 chr2:203674338-203689185 Sample_02_0570 Brain LN229_10_mM_glucose 317 7 381 1 1 78 0 CD28
SE_02_091400374 chr2:203674359-203694749 Sample_02_0914 Heart left ventricle_DCM_LV1342 374 12 514 2 1 102 0 CD28
SE_02_089000969 chr2:203674362-203693608 Sample_02_0890 Heart left ventricle_LV1200 969 6 493 1 1 99 0 CD28
SE_02_113901231 chr2:203674367-203687815 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 1231 4 340 1 1 72 0 CD28
SE_02_111500789 chr2:203674757-203687303 Sample_02_1115 Liver HepG2 789 3 317 1 1 70 0 CD28
SE_02_126300622 chr2:203674792-203689025 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 622 4 362 1 1 76 0 CD28
SE_02_088801075 chr2:203675496-203693041 Sample_02_0888 Heart left ventricle_LV1160 1075 5 449 1 0 95 0 CD28
SE_02_088701014 chr2:203676358-203694047 Sample_02_0887 Heart left ventricle_LV1121 1014 7 443 1 0 92 0 CD28
SE_02_153200608 chr2:203679027-203689644 Sample_02_1532 Mammary gland MCF10A 608 3 267 1 0 67 0 CD28
SE_02_126700603 chr2:203679381-203687385 Sample_02_1267 Bone Im-GCT-4072_G34W 603 2 195 1 0 61 0 CD28
SE_02_090900920 chr2:203680720-203694526 Sample_02_0909 Heart left ventricle_DCM_LV1264 920 6 349 1 0 85 0 CD28
SE_02_112900913 chr2:203680752-203691642 Sample_02_1129 Adipose visceral adipose_CTL_HCTR13 913 7 283 0 0 67 0 CD28
SE_02_126501497 chr2:203681218-203687517 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 1497 2 152 0 0 56 0 CD28
SE_00_000301239 chr2:203681306-203704885 Sample_00_0003 Adrenal gland adrenal-gland_97d 1239 5 583 4 0 86 0 CD28
SE_02_091600530 chr2:203681334-203694563 Sample_02_0916 Heart left ventricle_DCM_LV1392 530 7 324 1 0 85 0 CD28
SE_02_062000136 chr2:203681518-203692875 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 136 7 278 0 0 80 0 CD28
SE_02_089900755 chr2:203681527-203694006 Sample_02_0899 Heart left ventricle_LV1400 755 7 306 0 0 82 0 CD28
SE_02_062100141 chr2:203682227-203685912 Sample_02_0621 Aortic Aortic Endothelial Cells_UF 141 5 88 0 0 50 0 CD28
SE_02_065600188 chr2:203682329-203686810 Sample_02_0656 Tracheobronchial epithelial HTBE_H5N1_mock 188 4 102 0 0 51 0 CD28
SE_02_070700987 chr2:203682672-203687973 Sample_02_0707 Pancreas BxPC3 WT 987 3 126 0 0 53 0 CD28
SE_02_122000372 chr2:203687965-203719002 Sample_02_1220 Bone marrow JJN3 372 8 764 30 2 63 72 CD28
SE_01_004300077 chr2:203688360-203751106 Sample_01_0043 Blood KOPT-K1 77 7 1569 97 12 168 663 CD28
SE_01_004800170 chr2:203688371-203732296 Sample_01_0048 Peripheral blood MM.1S 170 6 1085 63 8 105 193 CD28
SE_02_111200618 chr2:203689031-203721696 Sample_02_1112 T lymphocyte THP-6 T-ALL 618 7 806 35 2 72 72 CD28
SE_02_006000165 chr2:203689485-203723397 Sample_02_0060 Haematopoietic and lymphoid tissue blood WT-11bp/Jurkat 165 3 834 40 3 72 72 CD28
SE_02_104900729 chr2:203698953-203786155 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 729 40 2392 165 18 176 663 CD28
SE_02_104500218 chr2:203700535-203749065 Sample_02_1045 Peripheral blood CD4+ CD7- cells_CTCL992 218 32 1223 90 12 138 663 CD28
SE_01_004400848 chr2:203703359-203722885 Sample_01_0044 Haematopoietic and lymphoid tissue Loucy 848 3 479 36 3 48 72 CD28
SE_02_005900180 chr2:203703376-203723087 Sample_02_0059 Haematopoietic and lymphoid tissue blood WT/Jurkat 180 2 481 36 3 48 72 CD28
SE_02_023400091 chr2:203703376-203766346 Sample_02_0234 Tonsil Th17 91 8 1649 116 15 148 663 CD28
SE_02_022200321 chr2:203703413-203744553 Sample_02_0222 Blood DU-528 321 4 1037 79 9 133 663 CD28
SE_02_005800230 chr2:203703426-203723208 Sample_02_0058 Haematopoietic and lymphoid tissue blood WT/Jurkat-11bp 230 2 483 36 3 48 72 CD28
SE_02_022100346 chr2:203703509-203722860 Sample_02_0221 Blood CCRF-CEM 346 3 476 36 3 48 72 CD28
SE_00_000800154 chr2:203703525-203742848 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 154 4 980 76 9 127 663 CD28
SE_02_022500381 chr2:203703592-203723241 Sample_02_0225 Haematopoietic and lymphoid tissue PF-382 381 4 482 36 3 48 72 CD28
SE_00_004400186 chr2:203703629-203766158 Sample_00_0044 Cord blood T-cell 186 8 1640 115 15 148 663 CD28
SE_00_000700136 chr2:203703823-203745415 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 136 4 1049 84 9 134 663 CD28
SE_02_023300056 chr2:203703925-203766115 Sample_02_0233 Tonsil Th1 56 13 1633 115 15 148 663 CD28
SE_00_000900988 chr2:203703974-203742780 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 988 4 967 76 9 127 663 CD28
SE_00_004500199 chr2:203704019-203764464 Sample_00_0045 Thymus thymus 199 8 1571 114 14 146 663 CD28
SE_02_140200050 chr2:203704044-203718440 Sample_02_1402 Blood MM.1S_GNE-781 50 2 348 23 2 31 72 CD28
SE_02_045500241 chr2:203704050-203749016 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 241 19 1132 90 12 138 663 CD28
SE_02_045400287 chr2:203704104-203743639 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 287 12 992 77 9 131 663 CD28
SE_00_004700239 chr2:203704125-203723183 Sample_00_0047 Blood effector memory CD4+ alpha-beta T cell 239 13 467 36 3 48 72 CD28
SE_02_045600276 chr2:203704146-203748527 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 276 12 1115 89 12 138 663 CD28
SE_02_002600090 chr2:203704327-203742774 Sample_02_0026 Blood CD4donorE 90 12 959 76 9 127 663 CD28
SE_02_014800627 chr2:203705138-203720749 Sample_02_0148 Blood CD8_T_cells 627 2 378 27 2 47 72 CD28
SE_02_045700159 chr2:203705634-203748848 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 159 13 1083 86 11 136 663 CD28
SE_02_059300626 chr2:203705900-203723051 Sample_02_0593 Fetal spleenocytes fetal naive T cells 626 11 419 32 2 46 72 CD28
SE_02_135000681 chr2:203706183-203764036 Sample_02_1350 Leukophereses leukophereses_p456 681 13 1500 107 12 144 663 CD28
SE_02_139300450 chr2:203707426-203741764 Sample_02_1393 Lymph node anaplastic large cell lymphoma cells_ALK+#54 450 7 858 66 8 119 591 CD28
SE_02_104000409 chr2:203708774-203765048 Sample_02_1040 Peripheral blood CD4+ cells_CTCL1126 409 22 1465 105 13 139 591 CD28
SE_02_104200441 chr2:203708844-203760232 Sample_02_1042 Peripheral blood CD4+ cells_CTCL1137 441 18 1307 95 11 131 591 CD28
SE_02_138800289 chr2:203717489-203749872 Sample_02_1388 Peripheral blood JB6_ALK+ 289 8 819 70 10 109 591 CD28
SE_02_138900253 chr2:203718103-203759756 Sample_02_1389 Peripheral blood SUP-M2_ALK+ 253 10 1088 82 10 109 591 CD28
SE_02_141300751 chr2:203721034-203744214 Sample_02_1413 Muscle RH4_sgBRG1 751 10 603 49 7 86 591 CD28
SE_02_074000421 chr2:203721282-203744149 Sample_02_0740 Muscle RH3 421 11 592 49 7 85 591 CD28
SE_02_102100429 chr2:203722771-203760920 Sample_02_1021 Mammary gland SUM159R 429 8 1003 69 9 90 591 CD28
SE_02_127900090 chr2:203724354-203816299 Sample_02_1279 Bone Mesenchymal stem cells 90 15 2507 143 18 226 591 CD28
SE_02_151501008 chr2:203729980-203760629 Sample_02_1515 Non-transformed mammary epithelial IMEC WT 1008 8 804 50 4 75 470 CD28
SE_02_058600077 chr2:203733182-203824038 Sample_02_0586 Chordal patient-derived chordoma MGH_4 77 26 2479 127 13 212 470 CD28,CTLA4
SE_02_031700159 chr2:203736877-203815771 Sample_02_0317 Neuroblastoma GICAN 159 9 2175 118 13 184 189 CD28
SE_02_111200785 chr2:203738660-203744063 Sample_02_1112 T lymphocyte THP-6 T-ALL 785 1 135 12 1 36 32 CD28
SE_02_008700145 chr2:203756301-203820903 Sample_02_0087 Pancreas MiaPaca2 145 2 1792 87 9 147 0 CTLA4,CD28
SE_02_113700057 chr2:203757641-203815358 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 57 19 1616 79 9 132 0 CD28
SE_02_113800113 chr2:203758269-203814527 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 113 11 1582 79 9 132 0 CD28
SE_02_088200139 chr2:203774276-203815364 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 139 10 1093 43 4 119 0 CTLA4,CD28
SE_02_088300212 chr2:203774404-203815327 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 212 8 1090 43 4 119 0 CTLA4,CD28
SE_02_087900151 chr2:203774453-203814476 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 151 10 1067 43 4 119 0 CTLA4,CD28
SE_02_088000123 chr2:203774647-203813319 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 123 9 1026 41 4 115 0 CTLA4,CD28
SE_02_087800132 chr2:203774668-203813768 Sample_02_0878 Ovary SVOG3e cells_noDox_control 132 7 1045 42 4 116 0 CTLA4,CD28
SE_02_059400202 chr2:203774687-203816392 Sample_02_0594 iPSC-derived neural progenitors 202 9 1111 43 4 123 0 CTLA4,CD28
SE_02_157100172 chr2:203775018-203812686 Sample_02_1571 Fibroblast Fibroblast cells 172 8 998 40 4 115 0 CTLA4,CD28
SE_02_044500760 chr2:203775229-203820770 Sample_02_0445 Lung lung metastasis from primary osteosarcoma tumor M10 760 22 1198 48 4 134 0 CTLA4,CD28
SE_02_084600197 chr2:203775364-203815034 Sample_02_0846 Mammary gland MDA-MB-231_untreat 197 12 1053 43 4 119 0 CTLA4,CD28
SE_02_143600581 chr2:203775461-203813063 Sample_02_1436 Liver LSEC-Ctrl 581 11 996 41 4 115 0 CTLA4,CD28
SE_02_143800585 chr2:203775499-203815143 Sample_02_1438 Liver LSEC 585 12 1055 43 4 119 0 CTLA4,CD28
SE_02_072300246 chr2:203779980-203816150 Sample_02_0723 Pancreas MIAPaca2 WT 246 7 932 31 4 123 0 CTLA4,CD28
SE_02_048100318 chr2:203780277-203815372 Sample_02_0481 Mammary gland MDA-MB231 318 8 902 31 4 119 0 CTLA4,CD28
SE_02_028000150 chr2:203780350-203816365 Sample_02_0280 Mammary gland SUM159_DMSO_24h 150 4 928 31 4 123 0 CTLA4,CD28
SE_02_099200289 chr2:203780722-203813742 Sample_02_0992 Mammary gland MDA-MB-231_Par 289 11 850 30 4 116 0 CTLA4,CD28
SE_02_045100291 chr2:203780977-203815273 Sample_02_0451 Skin in vitro transformedskin fibroblasts_tumourigenic 291 7 879 31 4 119 0 CTLA4,CD28
SE_02_126300100 chr2:203781021-203815833 Sample_02_1263 Bone Im-GCT-4072_G34W unedited 100 4 894 31 4 121 0 CTLA4,CD28
SE_02_158400358 chr2:203781030-203816492 Sample_02_1584 Brain U87 GBM_Mock 358 6 910 31 4 123 0 CTLA4,CD28
SE_02_113900223 chr2:203781162-203815787 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 223 8 884 31 4 121 0 CTLA4,CD28
SE_02_132800065 chr2:203781218-203816064 Sample_02_1328 Non-mineralized aortic valves aortic valve interstitial cells 65 10 895 31 4 123 0 CTLA4,CD28
SE_02_044000286 chr2:203781234-203815245 Sample_02_0440 Bone LM7 286 19 872 31 4 119 0 CTLA4,CD28
SE_02_143700866 chr2:203781438-203813860 Sample_02_1437 Liver LSEC-TNF 866 8 834 30 4 118 0 CTLA4,CD28
SE_02_155200410 chr2:203781695-203816055 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 410 17 886 29 4 122 0 CTLA4,CD28
SE_02_141300351 chr2:203781735-203816115 Sample_02_1413 Muscle RH4_sgBRG1 351 10 885 29 4 122 0 CTLA4,CD28
SE_02_141000929 chr2:203781847-203815699 Sample_02_1410 Brain GSC6 929 8 870 29 4 119 0 CTLA4,CD28
SE_02_061100567 chr2:203782599-203820034 Sample_02_0611 Liposarcoma DDLPS_T1 567 24 965 32 4 131 0 CTLA4,CD28
SE_02_095100387 chr2:203801079-203814965 Sample_02_0951 HMSCs hMSCs 387 5 346 6 1 40 0 CTLA4,CD28
SE_02_015100486 chr2:203801473-203813927 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 486 2 305 5 1 40 0 CTLA4,CD28
SE_02_037000300 chr2:203801473-203820146 Sample_02_0370 Skeletal muscle RH4 300 5 463 11 1 55 0 CTLA4,CD28
SE_02_084700263 chr2:203801512-203813409 Sample_02_0847 Mammary gland LM2-4175 263 8 284 4 1 36 0 CTLA4,CD28
SE_02_126600460 chr2:203801598-203812740 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 460 1 270 4 1 36 0 CTLA4,CD28
SE_02_126500682 chr2:203801638-203816059 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 682 3 358 6 1 44 0 CTLA4,CD28
SE_02_108500484 chr2:203801714-203812836 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 484 4 268 4 1 36 0 CTLA4,CD28
SE_02_093800362 chr2:203801746-203812711 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 362 6 265 4 1 36 0 CTLA4,CD28
SE_02_136800239 chr2:203801895-203813989 Sample_02_1368 Pancreas MIA PaCa-2-untreated 239 9 300 5 1 40 0 CTLA4,CD28
SE_02_126700252 chr2:203802062-203813850 Sample_02_1267 Bone Im-GCT-4072_G34W 252 3 295 5 1 40 0 CTLA4,CD28
SE_02_111500539 chr2:203802196-203812762 Sample_02_1115 Liver HepG2 539 5 260 4 1 36 0 CTLA4,CD28
SE_02_046900340 chr2:203802259-203812183 Sample_02_0469 Kidney 786-O PBRM1 shRNA#2 340 8 241 3 1 36 0 CTLA4,CD28
SE_02_016100435 chr2:203802266-203812365 Sample_02_0161 Brain U87 435 4 247 3 1 36 0 CTLA4,CD28
SE_02_113300520 chr2:203802518-203812482 Sample_02_1133 Liver Hepatic stellate cells 520 3 242 3 1 36 0 CTLA4,CD28
SE_02_099000230 chr2:203802835-203815320 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 230 5 312 6 1 39 0 CTLA4,CD28
SE_02_099100540 chr2:203802930-203815317 Sample_02_0991 Breast cancer cell line lung metastatic variant MDA-MB-231 LM2 540 5 307 6 1 39 0 CTLA4,CD28
Genomic distribution of SEs associated with CD28
Genome Browser

The strength of the tissue affected by the gene

Expression of CD28

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)