SEdb 2.0
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Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000149201
Gene: CCDC81 Gene type: protein_coding
Strand: + External links:
Genomic region: chr11:86374736-86423109 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_108400045 chr11:86327907-86360762 Sample_02_1084 Blood KBM7-derived near haploid cells 45 15 862 102 3 29 134 C11ORF73,MIR6755,CCDC81
SE_02_075500309 chr11:86411140-86426031 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 309 3 370 31 1 20 314 CCDC81
SE_02_075200346 chr11:86411647-86426759 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 346 3 376 32 1 20 314 CCDC81
SE_02_086700340 chr11:86438680-86524857 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 340 34 2371 251 7 255 976 ME3,CCDC81
SE_02_049200068 chr11:86438805-86526743 Sample_02_0492 Pharyng Detroit 562_LPS 68 32 2463 261 7 256 976 ME3,CCDC81
SE_02_142800653 chr11:86439598-86525480 Sample_02_1428 Shoulder fibroblast_316 653 17 2375 251 7 256 976 ME3,CCDC81
SE_02_053300570 chr11:86439814-86498147 Sample_02_0533 Blood vessel Circle of Willis_54y 570 24 1603 173 3 170 895 ME3,CCDC81
SE_02_059400472 chr11:86440722-86525469 Sample_02_0594 iPSC-derived neural progenitors 472 22 2351 244 7 253 976 ME3,CCDC81
SE_02_047500331 chr11:86440941-86487319 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 331 14 1272 145 3 132 754 ME3,CCDC81
SE_02_102500400 chr11:86441275-86526794 Sample_02_1025 Esophagus KYSE150 400 23 2410 251 7 250 927 ME3,CCDC81
SE_02_094800355 chr11:86441621-86498154 Sample_02_0948 Pharyng Detroit562 355 8 1563 167 3 162 795 ME3,CCDC81
SE_02_083200113 chr11:86442671-86525746 Sample_02_0832 Umblical vein HUVECs_TNF30min 113 34 2303 241 7 246 868 ME3,CCDC81
SE_02_049100054 chr11:86442718-86526814 Sample_02_0491 Pharyng Detroit 562-Control 54 20 2359 245 7 246 862 ME3,CCDC81
SE_02_083100098 chr11:86449842-86525852 Sample_02_0831 Umblical vein HUVECs_TNF0min 98 28 2127 214 7 220 526 ME3,CCDC81
SE_02_058500086 chr11:86449860-86526109 Sample_02_0585 Umbilical vein HUVEC 0hour 86 29 2141 216 7 220 525 ME3,CCDC81
SE_02_002700044 chr11:86455517-86525957 Sample_02_0027 Umbilical vein HUVEC_VEGF_4h 44 11 1982 197 7 205 413 ME3,CCDC81
SE_02_130800251 chr11:86455588-86486160 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 251 3 851 92 3 84 176 ME3,CCDC81
SE_02_136200092 chr11:86455659-86553549 Sample_02_1362 Bladder UMUC1_sonic_pSIN-puro H1146A/E1148A-mutant UTX 92 22 2894 312 8 237 413 ME3,CCDC81
SE_02_094600495 chr11:86455760-86486142 Sample_02_0946 Tongue HN12 495 6 845 92 3 84 176 ME3,CCDC81
SE_02_130900618 chr11:86455952-86486206 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 618 4 841 91 3 84 176 ME3,CCDC81
SE_02_055700020 chr11:86455974-86537738 Sample_02_0557 iPSCs WT hiPSC#1 20 19 2405 256 7 213 413 ME3,CCDC81
SE_02_124000706 chr11:86456042-86498345 Sample_02_1240 Skin MCC13_virus_negative 706 9 1185 119 3 122 363 ME3,CCDC81
SE_02_151900536 chr11:86456189-86526442 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 536 30 1997 198 7 205 413 ME3,CCDC81
SE_02_156900085 chr11:86456256-86525942 Sample_02_1569 Endothelial Endothelial cells 85 13 1960 194 7 205 413 ME3,CCDC81
SE_02_011200193 chr11:86456257-86525595 Sample_02_0112 Connective tissue HT1080_untreated 193 10 1945 193 7 205 413 ME3,CCDC81
SE_02_052400515 chr11:86456265-86493629 Sample_02_0524 Pancreas iPS derived pancreatic precursor cells_Lane2 515 12 1044 104 3 103 249 ME3,CCDC81
SE_02_146900744 chr11:86456270-86525818 Sample_02_1469 Umbilical Vein HUVEC 744 15 1955 194 7 205 413 ME3,CCDC81
SE_02_147100450 chr11:86456309-86526810 Sample_02_1471 Blood Outgrowth Endothelia BOEC 450 17 2007 200 7 202 413 ME3,CCDC81
SE_02_144900050 chr11:86456392-86526509 Sample_02_1449 Adipose SW872_YAP_TFE3 50 16 1992 199 7 202 413 ME3,CCDC81
SE_02_050001256 chr11:86456401-86498241 Sample_02_0500 Fetal lung IMR90_#2 1256 9 1169 116 3 117 347 ME3,CCDC81
SE_02_113800345 chr11:86456411-86526612 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 345 18 1997 200 7 202 413 ME3,CCDC81
SE_02_061900351 chr11:86456429-86498737 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 351 18 1186 119 3 120 363 ME3,CCDC81
SE_02_052500409 chr11:86456443-86493600 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 409 10 1036 104 3 100 249 ME3,CCDC81
SE_02_126600141 chr11:86456516-86525764 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 141 11 1945 194 7 202 413 ME3,CCDC81
SE_02_093600167 chr11:86458415-86525546 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 167 14 1884 189 7 196 318 ME3,CCDC81
SE_02_071500400 chr11:86459582-86486096 Sample_02_0715 Pancreas SUIT2_TP63dN 400 8 742 84 3 75 81 ME3,CCDC81
SE_02_004900703 chr11:86467803-86478316 Sample_02_0049 Embryo endodermal CyT49_GTtoH 703 2 296 33 1 15 0 ME3,CCDC81
SE_00_005300613 chr11:86468861-86497848 Sample_00_0053 Embryo trophoblast cell originated from H1 613 10 815 84 2 58 87 ME3,CCDC81
SE_02_062000869 chr11:86473565-86485337 Sample_02_0620 Aortic Aortic Endothelial Cells_DF 869 10 316 42 2 27 0 ME3,CCDC81
SE_02_108500132 chr11:86473924-86526009 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 132 17 1469 147 6 148 237 ME3,CCDC81
SE_02_137900488 chr11:86473962-86525172 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 488 12 1431 143 6 148 237 ME3,CCDC81
SE_02_072400012 chr11:86474920-86526946 Sample_02_0724 Pancreatic duct AsPC1_GFP_DOX 12 14 1490 150 6 141 237 ME3,CCDC81
SE_02_083900171 chr11:86475119-86525242 Sample_02_0839 Embryo hNPCs_K755R/+ 171 16 1402 140 6 141 237 ME3,CCDC81
SE_01_002600774 chr11:86476043-86486278 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 774 2 285 35 2 20 0 ME3,CCDC81
SE_02_139900318 chr11:86479866-86526739 Sample_02_1399 Bone U2OS_siMLL3.1 318 16 1349 132 5 140 237 ME3,CCDC81
SE_02_050700446 chr11:86482546-86498035 Sample_02_0507 Esophagus TE7_1 446 5 443 43 0 48 123 ME3,CCDC81
SE_02_071600623 chr11:86482567-86486307 Sample_02_0716 Pancreas SUIT2_GFP 623 2 113 18 0 18 0 ME3,CCDC81
SE_02_070600289 chr11:86482778-86486225 Sample_02_0706 Pancreas SUIT2 WT 289 2 101 15 0 18 0 ME3,CCDC81
SE_02_063800660 chr11:86482867-86525710 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 660 14 1211 119 4 139 237 ME3,CCDC81
SE_02_016700440 chr11:86483156-86525821 Sample_02_0167 Mammary gland HCC1954_LCC2 440 6 1212 120 4 139 237 ME3,CCDC81
SE_02_137100683 chr11:86499488-86526156 Sample_02_1371 Pancreas Patu899S-untreated 683 8 760 76 4 80 50 ME3,CCDC81
SE_02_152300518 chr11:86500039-86525709 Sample_02_1523 Lung A549 DMSO 518 5 724 72 4 77 50 ME3,CCDC81
SE_02_071901030 chr11:86500445-86526295 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 1030 7 752 75 3 76 50 ME3,CCDC81,EED
SE_02_130800877 chr11:86500660-86525472 Sample_02_1308 Artery Pulmonary artery endothelial cells_caMEK5 877 6 703 70 3 76 50 ME3,CCDC81
SE_02_130900933 chr11:86503149-86525702 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 933 5 654 68 3 67 50 ME3,CCDC81
SE_02_047500502 chr11:86507084-86525303 Sample_02_0475 Induced hepatocyte-like cells hepatocyte-like cells 502 3 542 60 2 53 50 ME3,CCDC81
SE_01_001800469 chr11:86508047-86525989 Sample_01_0018 Submandibular Salivary Gland ACC112 469 4 546 59 2 52 50 ME3,CCDC81
SE_02_071500419 chr11:86508310-86525891 Sample_02_0715 Pancreas SUIT2_TP63dN 419 8 535 59 2 51 50 ME3,CCDC81,EED
SE_02_070600295 chr11:86508354-86525856 Sample_02_0706 Pancreas SUIT2 WT 295 6 530 59 2 51 50 ME3,CCDC81,EED
SE_02_019600502 chr11:86508375-86511273 Sample_02_0196 Stomach NCC59 502 1 87 9 1 8 50 ME3,CCDC81
SE_02_111000708 chr11:86510584-86525341 Sample_02_1110 Other HGrC1 708 8 440 50 1 43 0 ME3,CCDC81
SE_02_071600649 chr11:86511343-86526731 Sample_02_0716 Pancreas SUIT2_GFP 649 6 487 56 1 43 0 ME3,CCDC81
SE_02_075501485 chr11:86511941-86525196 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1485 4 388 44 1 43 0 ME3,CCDC81
SE_00_005300885 chr11:86513403-86525231 Sample_00_0053 Embryo trophoblast cell originated from H1 885 6 350 38 1 43 0 ME3,CCDC81
SE_01_002600364 chr11:86514711-86525774 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 364 2 341 36 1 43 0 ME3,CCDC81
SE_01_001900887 chr11:86515251-86525774 Sample_01_0019 Brain and spinal cord astrocyte 887 3 321 36 1 43 0 ME3,CCDC81
SE_02_070800232 chr11:86515297-86525566 Sample_02_0708 Pancreas hF3 organoid 232 4 313 35 1 43 0 ME3,CCDC81
SE_02_052500591 chr11:86515539-86525818 Sample_02_0525 Pancreas iPS derived pancreatic precursor cells_Lane1 591 7 322 36 1 43 0 ME3,CCDC81
SE_02_075400932 chr11:86515743-86525937 Sample_02_0754 Embryo ES-derived progenitors Pancreatic Progenitors 1 WT 932 3 320 32 1 43 0 ME3,CCDC81
Genomic distribution of SEs associated with CCDC81
Genome Browser

The strength of the tissue affected by the gene

Expression of CCDC81

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)