Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | |
| Gene: | C9ORF5 | Gene type: | |
| Strand: | External links: |
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| Genomic region: | :- | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_035400764 | chr9:109081843-109120961 |
Sample_02_0354 | Colon | Colo205 | 764 | 10 | 1081 | 174 | 4 | 102 | 457 | C9ORF5,MIR32,C9ORF4 |
| SE_02_042000288 | chr9:109085995-109120025 |
Sample_02_0420 | Pectoralis major muscle | LHCN-M2_dox_6h | 288 | 7 | 962 | 150 | 3 | 94 | 417 | C9ORF5,MIR32,C9ORF4 |
| SE_02_030101098 | chr9:109092244-109120086 |
Sample_02_0301 | Neuroblastoma | GIMEN | 1098 | 3 | 763 | 125 | 2 | 77 | 303 | C9ORF5,MIR32,C9ORF4 |
| SE_01_008700186 | chr9:109093420-109120480 |
Sample_01_0087 | Thyroid gland | thyroid-gland | 186 | 2 | 750 | 125 | 2 | 79 | 305 | C9ORF5,MIR32,C9ORF4 |
| SE_01_007800638 | chr9:109094364-109120426 |
Sample_01_0078 | Heart left ventricle | heart-left-ventricle | 638 | 2 | 729 | 122 | 2 | 75 | 271 | C9ORF5,MIR32,C9ORF4 |
| SE_01_008100934 | chr9:109094445-109120479 |
Sample_01_0081 | Right atrium auricular region | right-atrium-auricular-region | 934 | 3 | 729 | 123 | 2 | 75 | 271 | C9ORF5,MIR32,C9ORF4 |
| SE_01_007400741 | chr9:109095379-109120423 |
Sample_01_0074 | Esophagus muscularis mucosa | esophagus-muscularis-mucosa | 741 | 2 | 699 | 115 | 2 | 75 | 271 | C9ORF5,MIR32,C9ORF4 |
| SE_01_008300681 | chr9:109095946-109120436 |
Sample_01_0083 | Sigmoid colon | sigmoid-colon | 681 | 2 | 684 | 111 | 2 | 75 | 271 | C9ORF5,MIR32,C9ORF4 |
| SE_01_008801100 | chr9:109096744-109120186 |
Sample_01_0088 | Tibial nerve | tibial-nerve | 1100 | 4 | 656 | 106 | 2 | 73 | 271 | C9ORF5,C9ORF4 |
| SE_01_006800059 | chr9:109096925-109104019 |
Sample_01_0068 | Prostate: derived from metastatic site: vertebral metastasis | VCaP | 59 | 2 | 177 | 31 | 1 | 11 | 0 | C9ORF5 |
| SE_01_007100539 | chr9:109097265-109120130 |
Sample_01_0071 | Pancreas | body-of-pancreas | 539 | 5 | 636 | 101 | 2 | 71 | 268 | C9ORF5,C9ORF4 |
| SE_02_016300416 | chr9:109097285-109102101 |
Sample_02_0163 | Prostate | C4-2B_SR2211_24h | 416 | 4 | 120 | 20 | 1 | 9 | 0 | C9ORF5 |
| SE_01_001200697 | chr9:109097596-109121881 |
Sample_01_0012 | Lung | A549_dexamethasone_1h | 697 | 5 | 665 | 106 | 2 | 74 | 271 | C9ORF5,C9ORF4 |
| SE_02_032501209 | chr9:109097679-109120082 |
Sample_02_0325 | Liver | hepatocytes_d1 | 1209 | 4 | 615 | 95 | 2 | 70 | 258 | C9ORF5,C9ORF4 |
| SE_02_011200631 | chr9:109097727-109120024 |
Sample_02_0112 | Connective tissue | HT1080_untreated | 631 | 5 | 614 | 94 | 2 | 70 | 245 | C9ORF5,C9ORF4 |
| SE_01_004100165 | chr9:109097834-109119996 |
Sample_01_0041 | Skin | keratinocyte | 165 | 5 | 611 | 94 | 2 | 70 | 243 | C9ORF5,C9ORF4 |
| SE_01_003900606 | chr9:109098152-109144525 |
Sample_01_0039 | Haematopoietic and lymphoid tissue bone marrow | K562 | 606 | 9 | 1264 | 211 | 4 | 148 | 534 | C9ORF5,C9ORF4,CTNNAL1,TE245 |
| SE_02_015000619 | chr9:109101246-109121625 |
Sample_02_0150 | Mammary gland | MDA-MB-231_GATA3 | 619 | 3 | 572 | 89 | 1 | 66 | 271 | C9ORF5,C9ORF4 |
| SE_02_011600707 | chr9:109106243-109120078 |
Sample_02_0116 | Mammary gland | MDA-MB-231_untreat | 707 | 1 | 400 | 63 | 1 | 61 | 256 | C9ORF5,C9ORF4 |
| SE_03_001300995 | chr9:109106269-109121324 |
Sample_03_0013 | Lung | A549 | 995 | 1 | 433 | 72 | 1 | 65 | 271 | C9ORF5,C9ORF4 |
| SE_02_015100533 | chr9:109106486-109121367 |
Sample_02_0151 | Mammary gland | MDA-MB-231_TA1del | 533 | 2 | 425 | 71 | 1 | 65 | 263 | C9ORF5,C9ORF4 |
Genomic distribution of SEs associated with C9ORF5