Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000125703 |
| Gene: | ATG4C | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr1:62784132-62865516 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_057601148 | chr1:62759580-62801583 |
Sample_02_0576 | Blood | HEL_sgLKB1e2 | 1148 | 8 | 1031 | 102 | 0 | 0 | 85 | ATG4C |
| SE_02_058001162 | chr1:62759603-62801636 |
Sample_02_0580 | Blood | HEL_sgSIK3e4 | 1162 | 8 | 1032 | 101 | 0 | 0 | 85 | ATG4C |
| SE_02_082200701 | chr1:62774305-62801677 |
Sample_02_0822 | Haematopoietic and lymphoid tissue | SET-2_insR_DMSO | 701 | 5 | 650 | 54 | 0 | 0 | 85 | ATG4C |
| SE_02_147501014 | chr1:62779899-62787453 |
Sample_02_1475 | Bone | CHLA-25 | 1014 | 2 | 198 | 21 | 0 | 0 | 85 | ATG4C |
| SE_02_072800384 | chr1:62783779-62812329 |
Sample_02_0728 | Lymphoma | I10_Mantle cell lymphoma tissue_DMSO | 384 | 7 | 685 | 61 | 3 | 5 | 122 | ATG4C |
| SE_02_073100366 | chr1:62783783-62812184 |
Sample_02_0731 | Lymphoma | J4_Mantle cell lymphoma tissue_THZ1 | 366 | 6 | 678 | 59 | 3 | 5 | 122 | ATG4C |
| SE_02_073000326 | chr1:62783789-62812475 |
Sample_02_0730 | Lymphoma | J4_Mantle cell lymphoma tissue_DMSO | 326 | 5 | 690 | 62 | 3 | 5 | 122 | ATG4C |
| SE_02_073300455 | chr1:62783798-62812350 |
Sample_02_0733 | Lymphoma | L20_Mantle cell lymphoma tissue_THZ1 | 455 | 6 | 686 | 62 | 3 | 5 | 122 | ATG4C |
| SE_02_073200455 | chr1:62783810-62812203 |
Sample_02_0732 | Lymphoma | L20_Mantle cell lymphoma tissue_DMSO | 455 | 8 | 678 | 59 | 3 | 5 | 122 | ATG4C |
| SE_02_152200177 | chr1:62870136-62893859 |
Sample_02_1522 | Skin | A375 RTKi | 177 | 5 | 498 | 49 | 0 | 186 | 0 | ATG4C |
| SE_02_085800526 | chr1:62872412-62893548 |
Sample_02_0858 | Glioblastoma | Glioblastoma neurosphere cell_HF-3177 | 526 | 5 | 449 | 43 | 0 | 186 | 0 | ATG4C |
| SE_02_118500982 | chr1:62872565-62898163 |
Sample_02_1185 | Brain | GBM14 | 982 | 10 | 558 | 43 | 0 | 217 | 0 | ATG4C |
| SE_02_118900411 | chr1:62872950-62905462 |
Sample_02_1189 | Brain | GBM22 | 411 | 11 | 732 | 52 | 2 | 345 | 0 | ATG4C |
| SE_02_129000414 | chr1:62875268-62906336 |
Sample_02_1290 | Lung | NCI-H69_p8-15 | 414 | 9 | 717 | 46 | 2 | 356 | 0 | ATG4C |
| SE_02_148100306 | chr1:62903185-62932648 |
Sample_02_1481 | Bone | MIC | 306 | 7 | 789 | 15 | 3 | 258 | 0 | ATG4C |
| SE_02_070100472 | chr1:62903710-62927859 |
Sample_02_0701 | Bone | David_TC32 | 472 | 10 | 634 | 15 | 3 | 206 | 0 | ATG4C |
| SE_02_147500280 | chr1:62903869-62932399 |
Sample_02_1475 | Bone | CHLA-25 | 280 | 3 | 761 | 14 | 3 | 255 | 0 | ATG4C |
| SE_02_143201317 | chr1:62905040-62937713 |
Sample_02_1432 | Bone | A673 STAG2 WT | 1317 | 11 | 889 | 16 | 3 | 163 | 0 | ATG4C |
| SE_02_148400188 | chr1:62908596-62933608 |
Sample_02_1484 | Bone | Rh1 | 188 | 5 | 690 | 13 | 3 | 128 | 0 | ATG4C |
| SE_02_143301353 | chr1:62916099-62934081 |
Sample_02_1433 | Bone | A673 STAG2 null | 1353 | 9 | 533 | 12 | 3 | 116 | 0 | ATG4C |
| SE_02_105900958 | chr1:62917126-62933182 |
Sample_02_1059 | Bone | A673_WT | 958 | 6 | 468 | 11 | 3 | 107 | 0 | ATG4C |
| SE_02_147300965 | chr1:62917126-62933182 |
Sample_02_1473 | Bone | A-673 | 965 | 6 | 468 | 11 | 3 | 107 | 0 | ATG4C |
| SE_02_148200606 | chr1:62917628-62929987 |
Sample_02_1482 | Bone | POE | 606 | 4 | 360 | 11 | 3 | 83 | 0 | ATG4C |
| SE_02_106000328 | chr1:62917941-62932829 |
Sample_02_1060 | Bone | TC71_SA2 KO | 328 | 6 | 438 | 11 | 3 | 86 | 0 | ATG4C |
| SE_02_148000811 | chr1:62918554-62932732 |
Sample_02_1480 | Bone | MHH-ES-1 | 811 | 5 | 421 | 10 | 3 | 85 | 0 | ATG4C |
| SE_02_074000893 | chr1:62952143-62965092 |
Sample_02_0740 | Muscle | RH3 | 893 | 5 | 366 | 1 | 0 | 65 | 0 | ATG4C |
| SE_02_152200305 | chr1:62992348-63024627 |
Sample_02_1522 | Skin | A375 RTKi | 305 | 7 | 1031 | 28 | 10 | 363 | 0 | ATG4C |
| SE_02_057000807 | chr1:63004635-63016257 |
Sample_02_0570 | Brain | LN229_10_mM_glucose | 807 | 8 | 364 | 15 | 6 | 86 | 0 | ATG4C |
| SE_02_085800809 | chr1:63005391-63027494 |
Sample_02_0858 | Glioblastoma | Glioblastoma neurosphere cell_HF-3177 | 809 | 6 | 737 | 25 | 8 | 136 | 0 | ATG4C |
Genomic distribution of SEs associated with ATG4C