Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000108602 |
| Gene: | ALDH3A1 | Gene type: | protein_coding |
| Strand: | - | External links: |
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| Genomic region: | chr17:19737984-19748943 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_044300231 | chr17:19699909-19770683 |
Sample_02_0443 | Bone | MG63 | 231 | 29 | 2241 | 168 | 3 | 85 | 3198 | SLC47A2,ALDH3A1 |
| SE_02_050500005 | chr17:19700349-19767187 |
Sample_02_0505 | Esophagus | KYSE70_1 | 5 | 19 | 2137 | 163 | 3 | 85 | 3194 | SLC47A2,ALDH3A1 |
| SE_02_051600005 | chr17:19700349-19767187 |
Sample_02_0516 | Esophagus | KYSE70 | 5 | 20 | 2137 | 163 | 3 | 85 | 3194 | SLC47A2,ALDH3A1 |
| SE_02_074501316 | chr17:19702579-19705559 |
Sample_02_0745 | Embryo | ES derived cardiac progenitor cells_day7 | 1316 | 1 | 77 | 3 | 0 | 2 | 335 | SLC47A2,ALDH3A1 |
| SE_02_074400697 | chr17:19702771-19705451 |
Sample_02_0744 | Embryo | ES derived cardiac mesoderm_day5 | 697 | 1 | 69 | 2 | 0 | 2 | 291 | SLC47A2,ALDH3A1 |
| SE_02_039600350 | chr17:19702994-19772288 |
Sample_02_0396 | Skin | NHEK-D | 350 | 24 | 2210 | 170 | 3 | 85 | 3354 | SLC47A2,ALDH3A1,ULK2 |
| SE_01_006100018 | chr17:19703093-19766813 |
Sample_01_0061 | Prostate | RWPE1 | 18 | 15 | 2050 | 158 | 3 | 84 | 3109 | ALDH3A1,SLC47A2 |
| SE_02_104600331 | chr17:19703173-19788864 |
Sample_02_1046 | Peripheral blood | CD4+ cells_CTCL1145 | 331 | 38 | 2621 | 200 | 3 | 172 | 4061 | SLC47A2,ALDH3A1,ULK2 |
| SE_02_078800039 | chr17:19703227-19766377 |
Sample_02_0788 | Brain | 3565 | 39 | 18 | 2036 | 157 | 3 | 84 | 3084 | SLC47A2,ALDH3A1 |
| SE_02_104700272 | chr17:19703469-19801503 |
Sample_02_1047 | Peripheral blood | CD4+ cells_CTCL1181 | 272 | 36 | 2935 | 212 | 4 | 198 | 4228 | SLC47A2,ALDH3A1,ULK2 |
| SE_02_103200060 | chr17:19704606-19767711 |
Sample_02_1032 | Head and neck | SCC1 JQ1 | 60 | 37 | 2052 | 158 | 3 | 83 | 2946 | SLC47A2,ALDH3A1 |
| SE_02_103100069 | chr17:19704730-19766124 |
Sample_02_1031 | Head and neck | SCC1 contol | 69 | 33 | 1996 | 155 | 3 | 83 | 2923 | SLC47A2,ALDH3A1 |
| SE_02_102600010 | chr17:19705641-19766520 |
Sample_02_1026 | Esophagus | KYSE200 | 10 | 17 | 1978 | 154 | 3 | 83 | 2817 | SLC47A2,ALDH3A1 |
| SE_02_153900049 | chr17:19705927-19762938 |
Sample_02_1539 | Nasopharyngeal | C666-1 | 49 | 13 | 1845 | 150 | 3 | 83 | 2814 | SLC47A2,ALDH3A1 |
| SE_02_154000012 | chr17:19706336-19762573 |
Sample_02_1540 | Nasopharyngeal | HK1 | 12 | 14 | 1813 | 147 | 3 | 83 | 2814 | SLC47A2,ALDH3A1 |
| SE_02_008601003 | chr17:19714314-19755789 |
Sample_02_0086 | Pancreas | CAPAN1 | 1003 | 6 | 1308 | 112 | 1 | 78 | 2185 | ALDH3A1,SLC47A2 |
| SE_02_032400096 | chr17:19715803-19767454 |
Sample_02_0324 | Colon | SW48 | 96 | 7 | 1674 | 133 | 1 | 78 | 1988 | ALDH3A1,SLC47A2 |
| SE_03_001000149 | chr17:19718624-19763583 |
Sample_03_0010 | Lung | A549_dexamethasone_1h | 149 | 6 | 1471 | 123 | 1 | 78 | 1704 | ALDH3A1,SLC47A2 |
| SE_04_000900123 | chr17:19718632-19762662 |
Sample_04_0009 | Lung | A549 | 123 | 8 | 1434 | 122 | 1 | 78 | 1704 | ALDH3A1,SLC47A2,ALDH3A2 |
| SE_03_000500145 | chr17:19718845-19763337 |
Sample_03_0005 | Lung | A549_dexamethasone_0.5h | 145 | 5 | 1461 | 123 | 1 | 78 | 1648 | ALDH3A1,SLC47A2 |
| SE_02_047800468 | chr17:19718857-19754097 |
Sample_02_0478 | Colon | normal colon mucosa | 468 | 12 | 1112 | 99 | 1 | 78 | 1644 | ALDH3A1,SLC47A2 |
| SE_04_000500036 | chr17:19718885-19762668 |
Sample_04_0005 | Lung | A549 FOXA2 overexpressed | 36 | 11 | 1427 | 122 | 1 | 78 | 1644 | ALDH3A1,SLC47A2,ALDH3A2 |
| SE_02_044200280 | chr17:19718964-19766366 |
Sample_02_0442 | Bone | MG63.3 | 280 | 21 | 1548 | 125 | 1 | 78 | 1627 | ALDH3A1,SLC47A2 |
| SE_00_002900778 | chr17:19721269-19736559 |
Sample_00_0029 | Ovary | ovary | 778 | 7 | 463 | 48 | 0 | 15 | 0 | ALDH3A1,SLC47A2 |
| SE_02_056900439 | chr17:19723747-19770941 |
Sample_02_0569 | Periodontal ligament | mesenchymal stem cell | 439 | 18 | 1499 | 114 | 1 | 78 | 1638 | ALDH3A1,ULK2,SLC47A2 |
| SE_02_117300825 | chr17:19724006-19762983 |
Sample_02_1173 | Brain | GBM01 | 825 | 11 | 1243 | 100 | 1 | 78 | 1596 | ALDH3A1,SLC47A2 |
| SE_02_121300804 | chr17:19724037-19762975 |
Sample_02_1213 | Brain | GBM31 | 804 | 9 | 1239 | 100 | 1 | 78 | 1596 | ALDH3A1,SLC47A2 |
| SE_02_101300268 | chr17:19724367-19762681 |
Sample_02_1013 | Brain | Lateral temporal lobe_6T_AD | 268 | 12 | 1218 | 99 | 1 | 78 | 1596 | ALDH3A1,SLC47A2 |
| SE_02_114300028 | chr17:19724430-19762461 |
Sample_02_1143 | Peripheral nerve | MPNST724_PRC2 WT | 28 | 11 | 1204 | 97 | 1 | 78 | 1596 | ALDH3A1,SLC47A2 |
| SE_00_002600830 | chr17:19726254-19729239 |
Sample_00_0026 | Muscle of trunk | muscle-of-trunk | 830 | 1 | 90 | 14 | 0 | 15 | 0 | ALDH3A1,SLC47A2 |
| SE_01_001200082 | chr17:19726839-19763305 |
Sample_01_0012 | Lung | A549_dexamethasone_1h | 82 | 4 | 1177 | 87 | 1 | 78 | 1596 | ALDH3A1,SLC47A2 |
| SE_02_029500087 | chr17:19727345-19756143 |
Sample_02_0295 | Lung | A549_TGFBeta_72h | 87 | 5 | 885 | 67 | 1 | 78 | 1596 | ALDH3A1,SLC47A2 |
| SE_02_101000112 | chr17:19727899-19737638 |
Sample_02_1010 | Brain | Lateral temporal lobe_3T_AD | 112 | 3 | 286 | 24 | 0 | 14 | 0 | ALDH3A1,SLC47A2 |
| SE_02_051700040 | chr17:19734126-19758381 |
Sample_02_0517 | Esophagus | TE5 | 40 | 1 | 767 | 51 | 1 | 63 | 1596 | ALDH3A1,SLC47A2 |
| SE_02_050600043 | chr17:19734127-19758404 |
Sample_02_0506 | Esophagus | TE5_1 | 43 | 1 | 769 | 51 | 1 | 63 | 1596 | ALDH3A1,SLC47A2 |
| SE_02_087200309 | chr17:19736986-19760484 |
Sample_02_0872 | Colon | HCT116_siCtrl-5FU | 309 | 9 | 751 | 52 | 1 | 63 | 1596 | ALDH3A1,SLC47A2 |
| SE_02_102900526 | chr17:19737737-19766271 |
Sample_02_1029 | Colon | HCT116 | 526 | 9 | 939 | 62 | 1 | 63 | 1596 | ALDH3A1,SLC47A2 |
| SE_02_101400168 | chr17:19741310-19753294 |
Sample_02_1014 | Brain | Lateral temporal lobe_7T_AD | 168 | 4 | 363 | 26 | 1 | 41 | 1011 | ALDH3A1,SLC47A2 |
| SE_01_000600082 | chr17:19742195-19763674 |
Sample_01_0006 | Lung | A549_ethanol_1h | 82 | 2 | 709 | 48 | 1 | 28 | 918 | ALDH3A1,SLC47A2 |
| SE_03_000800224 | chr17:19742442-19763471 |
Sample_03_0008 | Lung | A549_dexamethasone_7h | 224 | 2 | 699 | 47 | 1 | 27 | 866 | ALDH3A1,SLC47A2 |
| SE_03_001300206 | chr17:19742616-19757944 |
Sample_03_0013 | Lung | A549 | 206 | 1 | 484 | 29 | 1 | 26 | 830 | ALDH3A1,SLC47A2 |
| SE_02_087300431 | chr17:19742844-19757786 |
Sample_02_0873 | Colon | HCT116_siGLIS2.1-5FU | 431 | 6 | 460 | 27 | 1 | 25 | 785 | ALDH3A1,SLC47A2 |
| SE_03_001500196 | chr17:19743158-19766865 |
Sample_03_0015 | Lung | A549_dexamethasone_8h | 196 | 3 | 777 | 48 | 1 | 25 | 712 | ALDH3A1,SLC47A2 |
| SE_03_000700174 | chr17:19743461-19763068 |
Sample_03_0007 | Lung | A549_dexamethasone_12h | 174 | 2 | 643 | 44 | 1 | 23 | 647 | ALDH3A1,SLC47A2 |
| SE_03_001600226 | chr17:19743496-19757286 |
Sample_03_0016 | Lung | A549_dexamethasone_6h | 226 | 1 | 419 | 26 | 1 | 23 | 639 | ALDH3A1,SLC47A2 |
| SE_01_010700849 | chr17:19743586-19755442 |
Sample_01_0107 | Esophagus | esophagus squamous epithelium | 849 | 1 | 348 | 22 | 1 | 23 | 608 | ALDH3A1,SLC47A2 |
| SE_03_001400271 | chr17:19743608-19757131 |
Sample_03_0014 | Lung | A549_dexamethasone_2h | 271 | 1 | 409 | 26 | 1 | 23 | 603 | ALDH3A1,SLC47A2 |
| SE_04_000600071 | chr17:19743876-19756301 |
Sample_04_0006 | Lung | A549 GFP control | 71 | 2 | 366 | 24 | 1 | 23 | 516 | ALDH3A1,SLC47A2,ALDH3A2 |
| SE_03_000900269 | chr17:19743974-19763187 |
Sample_03_0009 | Lung | A549_dexamethasone_3h | 269 | 2 | 630 | 43 | 1 | 23 | 489 | ALDH3A1,SLC47A2 |
| SE_03_000400258 | chr17:19744078-19756887 |
Sample_03_0004 | Lung | A549_dexamethasone_4h | 258 | 1 | 383 | 25 | 1 | 23 | 483 | ALDH3A1,SLC47A2 |
| SE_02_002100492 | chr17:19744134-19754438 |
Sample_02_0021 | Colon | V429 | 492 | 1 | 291 | 19 | 1 | 23 | 476 | ALDH3A1,SLC47A2 |
| SE_03_001100132 | chr17:19744302-19757036 |
Sample_03_0011 | Lung | A549_dexamethasone_5h | 132 | 1 | 385 | 25 | 1 | 23 | 444 | ALDH3A1,SLC47A2 |
| SE_00_001100787 | chr17:19744407-19754178 |
Sample_00_0011 | Esophagus | esophagus | 787 | 2 | 280 | 19 | 1 | 23 | 430 | ALDH3A1,SLC47A2 |
| SE_02_094500088 | chr17:19744432-19754801 |
Sample_02_0945 | Brain | SF767 | 88 | 2 | 304 | 21 | 1 | 23 | 427 | ALDH3A1,SLC47A2 |
| SE_04_000800073 | chr17:19744435-19754849 |
Sample_04_0008 | Lung | A549 shRNA control | 73 | 1 | 304 | 21 | 1 | 23 | 427 | ALDH3A1,SLC47A2,ALDH3A2 |
| SE_04_001000393 | chr17:19744494-19762584 |
Sample_04_0010 | Lung | A549 TGFb | 393 | 3 | 586 | 40 | 1 | 23 | 407 | ALDH3A1,SLC47A2,ALDH3A2 |
| SE_02_133800134 | chr17:19744525-19754976 |
Sample_02_1338 | Esophagus | KYSE180 | 134 | 6 | 304 | 21 | 1 | 23 | 405 | ALDH3A1,SLC47A2 |
| SE_04_000700102 | chr17:19744551-19754997 |
Sample_04_0007 | Lung | A549 FOXA2 shRNA2 | 102 | 2 | 306 | 21 | 1 | 23 | 400 | ALDH3A1,SLC47A2,ALDH3A2 |
| SE_02_040700174 | chr17:19744874-19755794 |
Sample_02_0407 | Brain | BT16 | 174 | 1 | 324 | 23 | 1 | 23 | 301 | ALDH3A1,SLC47A2 |
| SE_02_041000303 | chr17:19744892-19762979 |
Sample_02_0410 | Brain | BT16_NoDox | 303 | 2 | 601 | 43 | 1 | 23 | 300 | ALDH3A1,SLC47A2 |
| SE_02_049100514 | chr17:19745009-19766427 |
Sample_02_0491 | Pharyng | Detroit 562-Control | 514 | 2 | 709 | 43 | 1 | 22 | 264 | ALDH3A1,SLC47A2 |
| SE_02_094801001 | chr17:19746570-19754821 |
Sample_02_0948 | Pharyng | Detroit562 | 1001 | 1 | 253 | 16 | 1 | 22 | 108 | ALDH3A1,SLC47A2 |
| SE_02_102700355 | chr17:19746602-19763074 |
Sample_02_1027 | Esophagus | KYSE180_1 | 355 | 11 | 562 | 38 | 1 | 22 | 108 | ALDH3A1,SLC47A2 |
| SE_02_152600222 | chr17:19746669-19755427 |
Sample_02_1526 | Lung | PC9 DMSO | 222 | 2 | 268 | 16 | 1 | 22 | 108 | ALDH3A1,SLC47A2 |
| SE_02_124800286 | chr17:19746822-19755087 |
Sample_02_1248 | Bladder | RT4 | 286 | 2 | 243 | 16 | 1 | 22 | 108 | ALDH3A1,SLC47A2 |
| SE_02_049200644 | chr17:19746877-19756327 |
Sample_02_0492 | Pharyng | Detroit 562_LPS | 644 | 2 | 286 | 19 | 1 | 22 | 108 | ALDH3A1,SLC47A2 |
| SE_02_035500350 | chr17:19747081-19754361 |
Sample_02_0355 | Colon | HCT15 | 350 | 2 | 208 | 14 | 1 | 22 | 108 | ALDH3A1,SLC47A2 |
| SE_01_005900335 | chr17:19747096-19754689 |
Sample_01_0059 | Lung | PC-9 | 335 | 1 | 224 | 15 | 1 | 22 | 108 | ALDH3A1,SLC47A2 |
| SE_02_094100135 | chr17:19747136-19755520 |
Sample_02_0941 | Brain | T98G | 135 | 2 | 248 | 16 | 1 | 22 | 108 | ALDH3A1,SLC47A2,ALDH3A2,AKAP10,SLC47A1 |
| SE_02_001100674 | chr17:19749478-19757420 |
Sample_02_0011 | Kidney | A-498_wtVHL | 674 | 4 | 250 | 11 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_02_017700601 | chr17:19749822-19772839 |
Sample_02_0177 | Urinary bladder | J82 | 601 | 2 | 750 | 44 | 0 | 9 | 306 | ULK2,ALDH3A1,SLC47A2 |
| SE_02_103700409 | chr17:19750002-19754232 |
Sample_02_1037 | Pharynx | FaDu Control | 409 | 2 | 117 | 3 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_02_026800862 | chr17:19750068-19755131 |
Sample_02_0268 | Kidney | A-498 | 862 | 1 | 149 | 5 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_02_142600998 | chr17:19750652-19770831 |
Sample_02_1426 | Shoulder | fibroblast_341 | 998 | 6 | 665 | 37 | 0 | 9 | 31 | ULK2,ALDH3A1,SLC47A2 |
| SE_02_154900657 | chr17:19750682-19755163 |
Sample_02_1549 | Gastrointestinal Stromal | GIST-430B | 657 | 3 | 131 | 5 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_02_060200536 | chr17:19750710-19754756 |
Sample_02_0602 | Mammary gland | MCF10A_p63shRNA_DMSO | 536 | 1 | 117 | 4 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_02_060000563 | chr17:19750756-19754815 |
Sample_02_0600 | Mammary gland | MCF10A_p53shRNA_DMSO | 563 | 1 | 117 | 5 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_02_060300537 | chr17:19750788-19754725 |
Sample_02_0603 | Mammary gland | MCF10A_p63shRNA_Nutlin3A | 537 | 1 | 115 | 4 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_02_123200558 | chr17:19750850-19754042 |
Sample_02_1232 | Lung | PC9_siMED13L-2 | 558 | 2 | 90 | 3 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_02_072500577 | chr17:19750944-19754649 |
Sample_02_0725 | Mammary gland | MCF10A-YAP5SA_ctrl | 577 | 5 | 106 | 4 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_02_123100557 | chr17:19750962-19754017 |
Sample_02_1231 | Lung | PC9_siMED13L-1 | 557 | 2 | 87 | 3 | 0 | 9 | 0 | ALDH3A1,SLC47A2 |
| SE_04_000300224 | chr17:19751118-19754797 |
Sample_04_0003 | Lung | A549 TEAD4 shRNA TGFb | 224 | 2 | 112 | 5 | 0 | 9 | 0 | ALDH3A1,SLC47A2,ALDH3A2 |
| SE_02_104800988 | chr17:19753834-19787476 |
Sample_02_1048 | Peripheral blood | CD4+ cell_UNTREATED | 988 | 13 | 999 | 69 | 0 | 88 | 967 | ULK2,ALDH3A1,SLC47A2 |
| SE_02_104902054 | chr17:19761936-19783878 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 2054 | 15 | 615 | 40 | 0 | 83 | 882 | ULK2,ALDH3A1,SLC47A2 |
Genomic distribution of SEs associated with ALDH3A1