SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest_active Ensembl ID: ENSG00000151388
Gene: ADAMTS12 Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:33523535-33892019 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_155500420 chr5:33662850-33697849 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 420 10 1039 67 2 40 102 ADAMTS12
SE_02_077000043 chr5:33674589-33863448 Sample_02_0770 Ovary OVCA429_shLuc 43 113 5233 462 9 226 145 ADAMTS12
SE_02_143700037 chr5:33678593-33860104 Sample_02_1437 Liver LSEC-TNF 37 59 5032 452 9 222 145 ADAMTS12
SE_02_155200868 chr5:33679409-33734354 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 868 16 1584 151 2 69 102 ADAMTS12
SE_02_155500064 chr5:33717087-33772577 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 64 29 1528 73 1 94 43 ADAMTS12
SE_02_043800015 chr5:33725447-33859904 Sample_02_0438 Bone HOS 15 72 3645 307 7 165 43 ADAMTS12
SE_02_144900012 chr5:33729634-33861519 Sample_02_1449 Adipose SW872_YAP_TFE3 12 28 3584 309 7 155 43 ADAMTS12
SE_02_076700052 chr5:33743074-33862772 Sample_02_0767 Ovary OVCA429 52 67 3239 300 7 137 43 ADAMTS12
SE_02_144500180 chr5:33753789-33862936 Sample_02_1445 Adipose SW872_TAZ4SA 180 38 2938 286 7 115 0 ADAMTS12
SE_02_076200179 chr5:33753939-33862916 Sample_02_0762 Podocyte podocyte_CTL 179 27 2929 286 7 115 0 ADAMTS12
SE_02_143800201 chr5:33754615-33862326 Sample_02_1438 Liver LSEC 201 29 2899 281 7 109 0 ADAMTS12
SE_02_143600195 chr5:33755042-33859982 Sample_02_1436 Liver LSEC-Ctrl 195 35 2809 275 7 109 0 ADAMTS12
SE_02_031700049 chr5:33760440-33860318 Sample_02_0317 Neuroblastoma GICAN 49 12 2674 264 7 107 0 ADAMTS12
SE_02_048100014 chr5:33760475-33862275 Sample_02_0481 Mammary gland MDA-MB231 14 33 2734 269 7 107 0 ADAMTS12
SE_02_011600007 chr5:33760725-33860310 Sample_02_0116 Mammary gland MDA-MB-231_untreat 7 10 2669 264 7 107 0 ADAMTS12
SE_02_113700093 chr5:33760854-33856732 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 93 29 2551 256 7 107 0 ADAMTS12
SE_02_040100125 chr5:33760904-33862936 Sample_02_0401 Mammary gland SUM159PT-T47D 125 21 2741 271 7 107 0 ADAMTS12
SE_02_076300537 chr5:33761641-33860010 Sample_02_0763 Podocyte podocyte_DEX 537 20 2633 263 7 103 0 ADAMTS12
SE_02_020900315 chr5:33764335-33825215 Sample_02_0209 Lung MRC-5_MRC5_1DPT 315 11 1634 183 4 45 0 ADAMTS12
SE_02_102100107 chr5:33764600-33862882 Sample_02_1021 Mammary gland SUM159R 107 28 2640 270 7 99 0 ADAMTS12
SE_02_030100423 chr5:33764790-33862786 Sample_02_0301 Neuroblastoma GIMEN 423 14 2632 269 7 95 0 ADAMTS12
SE_02_127100105 chr5:33765374-33861204 Sample_02_1271 Leiomyosarcoma SK-LMS-1_WT 105 30 2571 264 7 95 0 ADAMTS12
SE_00_000300183 chr5:33771721-33854091 Sample_00_0003 Adrenal gland adrenal-gland_97d 183 13 2206 241 6 82 0 ADAMTS12
SE_02_026500351 chr5:33771849-33856736 Sample_02_0265 Skeletal muscle 7250-PAX3-FOXO1 351 13 2284 248 7 90 0 ADAMTS12
SE_02_158400853 chr5:33771927-33811279 Sample_02_1584 Brain U87 GBM_Mock 853 11 1086 102 1 33 0 ADAMTS12
SE_02_017100858 chr5:33771989-33856413 Sample_02_0171 Lung IMR-90_proliferating 858 13 2275 248 7 90 0 ADAMTS12
SE_02_017300053 chr5:33772036-33819082 Sample_02_0173 Lung IMR-90_senescent 53 10 1312 142 2 33 0 ADAMTS12
SE_02_113800271 chr5:33772225-33856348 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 271 21 2264 246 7 90 0 ADAMTS12
SE_02_137600827 chr5:33772594-33855042 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 827 24 2202 237 6 88 0 ADAMTS12
SE_02_156800652 chr5:33772606-33856139 Sample_02_1568 Heart Cardiac progenitor cells 652 18 2241 242 6 89 0 ADAMTS12
SE_02_141600687 chr5:33773976-33838848 Sample_02_1416 Brain SF9402 687 16 1741 202 6 40 0 ADAMTS12
SE_02_145900060 chr5:33779621-33833756 Sample_02_1459 Pancreas THP1+PANC1_shCTCF 60 13 1448 182 6 40 0 ADAMTS12
SE_02_041900202 chr5:33780078-33855829 Sample_02_0419 Pectoralis major muscle LHCN-M2_nodox 202 29 2020 224 6 87 0 ADAMTS12
SE_02_153400016 chr5:33780270-33859207 Sample_02_1534 Mammary gland MDA-MB-231_ER?WT_0min 16 19 2134 232 7 88 0 ADAMTS12
SE_02_111500391 chr5:33780293-33794414 Sample_02_1115 Liver HepG2 391 8 387 24 1 9 0 ADAMTS12
SE_02_137800575 chr5:33780533-33855577 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 575 34 1998 222 6 86 0 ADAMTS12
SE_02_153500124 chr5:33780536-33830091 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 124 8 1326 167 5 39 0 ADAMTS12
SE_02_017500098 chr5:33780704-33856144 Sample_02_0175 Lung IMR-90_Etoposide 98 19 2017 225 6 87 0 ADAMTS12
SE_02_126000432 chr5:33780747-33859101 Sample_02_1260 Bone Im-GCT-3504_G34W-repair_4F5 432 19 2117 231 7 88 0 ADAMTS12
SE_02_113900465 chr5:33783629-33856449 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 465 23 1964 221 7 86 0 ADAMTS12
SE_02_084600049 chr5:33786457-33860259 Sample_02_0846 Mammary gland MDA-MB-231_untreat 49 36 2000 222 6 86 0 ADAMTS12
SE_02_007300079 chr5:33786606-33858732 Sample_02_0073 Other 90-8TL_DMSO 79 16 1948 217 6 86 0 ADAMTS12
SE_02_053100024 chr5:33786691-33859175 Sample_02_0531 Mammary gland MDA-MB-231 24 32 1960 219 6 86 0 ADAMTS12
SE_02_018200072 chr5:33786834-33856125 Sample_02_0182 melanoma LOX-IMVI 72 10 1850 213 5 85 0 ADAMTS12
SE_02_010700114 chr5:33786869-33857109 Sample_02_0107 Endometrium EEC16 114 8 1882 214 6 86 0 ADAMTS12
SE_02_139900293 chr5:33786922-33820139 Sample_02_1399 Bone U2OS_siMLL3.1 293 15 928 112 1 29 0 ADAMTS12
SE_02_015100010 chr5:33787008-33860476 Sample_02_0151 Mammary gland MDA-MB-231_TA1del 10 7 1990 221 6 86 0 ADAMTS12
SE_02_127200656 chr5:33787033-33827503 Sample_02_1272 Leiomyosarcoma SK-LMS-1_HDAC4KO 656 18 1093 144 3 36 0 ADAMTS12
SE_02_139800783 chr5:33787055-33817042 Sample_02_1398 Bone U2OS_siNC 783 12 848 97 1 29 0 ADAMTS12
SE_01_001900141 chr5:33787105-33855999 Sample_01_0019 Brain and spinal cord astrocyte 141 10 1843 211 5 85 0 ADAMTS12
SE_02_011000869 chr5:33787433-33856447 Sample_02_0110 Ovaries IOE11 869 10 1851 212 6 86 0 ADAMTS12
SE_02_122800731 chr5:33787453-33829242 Sample_02_1228 Mammary gland MDA-MB-231_2 731 15 1117 153 4 36 0 ADAMTS12
SE_02_081100374 chr5:33787479-33860172 Sample_02_0811 Thyroid BCPAP 374 31 1964 220 6 86 0 ADAMTS12
SE_02_024300263 chr5:33787488-33856247 Sample_02_0243 Foreskin foreskin_HFFs 263 8 1838 212 6 86 0 ADAMTS12
SE_02_153600052 chr5:33787523-33859289 Sample_02_1536 Mammary gland MDA-MB-231_ER?_L540Q_0min 52 19 1936 216 6 86 0 ADAMTS12
SE_02_061500554 chr5:33787574-33859872 Sample_02_0615 Liposarcoma liposarcoma cells_MLS402 554 19 1948 218 6 86 0 ADAMTS12
SE_02_049901063 chr5:33787613-33855784 Sample_02_0499 Fetal lung IMR90 IR Senescence 1063 21 1811 207 5 85 0 ADAMTS12
SE_02_047400629 chr5:33787750-33856103 Sample_02_0474 Fibroblast umbilical cord Fibroblast 629 16 1826 210 5 84 0 ADAMTS12
SE_02_087900492 chr5:33787856-33855863 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 492 16 1814 208 5 83 0 ADAMTS12
SE_02_088100529 chr5:33787949-33855575 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 529 16 1799 207 5 80 0 ADAMTS12
SE_02_087800547 chr5:33788044-33856291 Sample_02_0878 Ovary SVOG3e cells_noDox_control 547 14 1821 211 6 82 0 ADAMTS12
SE_02_144600085 chr5:33788349-33818795 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 85 4 852 105 1 25 0 ADAMTS12
SE_02_077100156 chr5:33788667-33862091 Sample_02_0771 Ovary OVCA429_shGRHL2 156 45 1987 224 6 82 0 ADAMTS12
SE_02_144400113 chr5:33789173-33859820 Sample_02_1444 Adipose SW872_Empty Vector 113 21 1896 218 6 82 0 ADAMTS12
SE_02_070700337 chr5:33801530-33859186 Sample_02_0707 Pancreas BxPC3 WT 337 14 1553 187 6 67 0 ADAMTS12
SE_02_011100870 chr5:33805226-33856635 Sample_02_0111 Ovaries IOE4 870 7 1363 164 6 67 0 ADAMTS12
SE_02_093600397 chr5:33805601-33855713 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 397 22 1311 160 5 65 0 ADAMTS12
SE_02_106700038 chr5:33805663-33862304 Sample_02_1067 Bone SJSA-1 38 27 1529 177 6 65 0 ADAMTS12
SE_02_015000068 chr5:33805907-33858624 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 68 6 1406 167 6 65 0 ADAMTS12
SE_02_027400801 chr5:33805986-33856094 Sample_02_0274 Endometriosis hTERT_KD 801 10 1318 163 5 64 0 ADAMTS12
SE_01_001800549 chr5:33805994-33856535 Sample_01_0018 Submandibular Salivary Gland ACC112 549 8 1337 164 6 65 0 ADAMTS12
SE_01_002600548 chr5:33806132-33828528 Sample_01_0026 Umbilical vein endothelial-cell-of-umbilical-vein 548 3 584 102 4 15 0 ADAMTS12
SE_02_088300993 chr5:33806188-33856225 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 993 10 1317 163 6 65 0 ADAMTS12
SE_02_071200384 chr5:33806209-33859977 Sample_02_0712 Pancreas BxPC3_sgNEG 384 15 1436 171 6 65 0 ADAMTS12
SE_02_088200973 chr5:33806238-33856042 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 973 13 1309 162 5 64 0 ADAMTS12
SE_02_093800861 chr5:33806319-33855515 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 861 15 1289 158 5 63 0 ADAMTS12
SE_02_153800042 chr5:33806360-33860007 Sample_02_1538 Mammary gland MDA-MB-231 42 8 1436 171 6 65 0 ADAMTS12
SE_02_094600143 chr5:33806398-33856487 Sample_02_0946 Tongue HN12 143 11 1330 163 6 65 0 ADAMTS12
SE_02_071300302 chr5:33806419-33862227 Sample_02_0713 Pancreas BxPC3_sgTP63 302 25 1507 176 6 65 0 ADAMTS12
SE_02_088000748 chr5:33806535-33856064 Sample_02_0880 Ovary SVOG3e cells_noDox_transduced_V5-FOXL2_WT 748 11 1303 162 5 64 0 ADAMTS12
SE_02_135501091 chr5:33806558-33855802 Sample_02_1355 Umbilical cord umbilical cord-derived mesenchymal stem cells_old 1091 8 1288 159 5 64 0 ADAMTS12
SE_02_099000110 chr5:33806640-33859108 Sample_02_0990 Breast cancer brain metastatic variant MDA-MB-231 BrM2 110 14 1406 167 6 65 0 ADAMTS12
SE_02_108500464 chr5:33806805-33856212 Sample_02_1085 Retinal Pigmented Epithelial hTERT-RPE1 464 26 1305 162 6 65 0 ADAMTS12
SE_02_144700170 chr5:33807012-33861526 Sample_02_1447 Adipose SW872_CAMTA1 170 18 1469 175 6 65 0 ADAMTS12
SE_02_020100013 chr5:33809200-33856741 Sample_02_0201 Stomach MKN7 13 10 1250 153 6 61 0 ADAMTS12
SE_02_021900101 chr5:33810572-33829961 Sample_02_0219 Mammary gland MDA-MB-231 101 4 499 88 4 12 0 ADAMTS12
SE_02_152600184 chr5:33816438-33860788 Sample_02_1526 Lung PC9 DMSO 184 16 1176 129 5 57 0 ADAMTS12
SE_02_114900346 chr5:33824213-33856251 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 346 11 834 77 3 57 0 ADAMTS12
SE_02_021000787 chr5:33824367-33855283 Sample_02_0210 Lung MRC-5_N_1DPT 787 8 792 70 2 55 0 ADAMTS12
SE_02_017300753 chr5:33831749-33856672 Sample_02_0173 Lung IMR-90_senescent 753 7 673 53 2 48 0 ADAMTS12
SE_02_144600176 chr5:33833213-33855786 Sample_02_1446 Adipose SW872_TAZ_CAMTA1 176 9 600 43 0 47 0 ADAMTS12
SE_02_000900501 chr5:33833783-33857725 Sample_02_0009 Kidney 786-O_wtVHL 501 8 658 46 1 48 0 ADAMTS12
SE_02_144800323 chr5:33842165-33864083 Sample_02_1448 Adipose SW872_YAP5SA 323 10 640 49 1 45 0 ADAMTS12
SE_02_122800999 chr5:33842619-33859946 Sample_02_1228 Mammary gland MDA-MB-231_2 999 12 500 42 1 42 0 ADAMTS12
SE_02_153500438 chr5:33842654-33857858 Sample_02_1535 Mammary gland MDA-MB-231_ER?WT_45min 438 7 440 34 1 42 0 ADAMTS12
SE_02_021900163 chr5:33843309-33853533 Sample_02_0219 Mammary gland MDA-MB-231 163 4 283 25 0 34 0 ADAMTS12
SE_02_020700383 chr5:33849963-33860072 Sample_02_0207 Stomach FU97 383 3 293 19 1 16 0 ADAMTS12
Genomic distribution of SEs associated with ADAMTS12
Genome Browser

The strength of the tissue affected by the gene

Expression of ADAMTS12

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)